RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 FAM46AQ96IP4 442 aaKnown RBP3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 MYRFLQ96LU7 910 aa3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 SLC4A9Q96Q91 983 aa3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 ANKIB1Q9P2G1 1089 aa3.24□□□□□ -1.89
RNU6-440P-201ENST00000390882 SFI1A8K8P3 1242 aa3.23□□□□□ -1.89
RNU6-440P-201ENST00000390882 RASA1P20936 1047 aa3.23□□□□□ -1.89
RNU6-440P-201ENST00000390882 ATP1A2P50993 1020 aa3.23□□□□□ -1.89
RNU6-440P-201ENST00000390882 CDCA8Q53HL2 280 aa3.23□□□□□ -1.89
RNU6-440P-201ENST00000390882 PERM1Q5SV97 790 aa3.23□□□□□ -1.89
RNU6-440P-201ENST00000390882 LARP1Q6PKG0 1096 aaKnown RBP3.23□□□□□ -1.89
RNU6-440P-201ENST00000390882 L3MBTL2Q969R5 705 aa3.23□□□□□ -1.89
RNU6-440P-201ENST00000390882 PBXIP1Q96AQ6 731 aa3.23□□□□□ -1.89
RNU6-440P-201ENST00000390882 BSDC1Q9NW68 430 aaPredicted RBP3.23□□□□□ -1.89
RNU6-440P-201ENST00000390882 SERTAD1Q9UHV2 236 aa3.23□□□□□ -1.89
RNU6-440P-201ENST00000390882 USP3Q9Y6I4 520 aa3.23□□□□□ -1.89
RNU6-440P-201ENST00000390882 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.22□□□□□ -1.89
RNU6-440P-201ENST00000390882 ZBTB7BO15156 539 aaPredicted RBP3.22□□□□□ -1.89
RNU6-440P-201ENST00000390882 ATG7O95352 703 aa3.22□□□□□ -1.89
RNU6-440P-201ENST00000390882 GTF2IP78347 998 aa3.22□□□□□ -1.89
RNU6-440P-201ENST00000390882 PLAURQ03405 335 aa3.22□□□□□ -1.89
RNU6-440P-201ENST00000390882 CPSF6Q16630 551 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU6-440P-201ENST00000390882 BEND4Q6ZU67 534 aa3.22□□□□□ -1.89
RNU6-440P-201ENST00000390882 FAM20CQ8IXL6 584 aa3.22□□□□□ -1.89
RNU6-440P-201ENST00000390882 LARGE2Q8N3Y3 721 aa3.22□□□□□ -1.89
RNU6-440P-201ENST00000390882 OGFOD1Q8N543 542 aa3.22□□□□□ -1.89
RNU6-440P-201ENST00000390882 FLCNQ8NFG4 579 aa3.22□□□□□ -1.89
RNU6-440P-201ENST00000390882 FAM168AQ92567 244 aa3.22□□□□□ -1.89
RNU6-440P-201ENST00000390882 PNMA5Q96PV4 448 aa3.22□□□□□ -1.89
RNU6-440P-201ENST00000390882 PAK6Q9NQU5 681 aaPredicted RBP3.22□□□□□ -1.89
RNU6-440P-201ENST00000390882 PCDHGA11Q9Y5H2 935 aa3.22□□□□□ -1.89
RNU6-440P-201ENST00000390882 FAM196BA6NMK8 535 aa3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 NOS2P35228 1153 aa3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 CLDN10P78369 228 aa3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 PDE4CQ08493 712 aa3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 PTK7Q13308 1070 aa3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 ELOAQ14241 798 aaKnown RBP3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 SETDB1Q15047 1291 aa3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 TEAD4Q15561 434 aa3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 CCDC102BQ68D86 513 aa3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 ATG4DQ86TL0 474 aaPredicted RBP3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 ANKLE2Q86XL3 938 aa3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 FAM200AQ8TCP9 573 aa3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 RHPN1Q8TCX5 695 aa3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 MFSD14AQ96MC6 490 aa3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 OSBPL1AQ9BXW6 950 aa3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 KCNF1Q9H3M0 494 aa3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 RBM19Q9Y4C8 960 aaKnown RBP3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.21□□□□□ -1.9
RNU6-440P-201ENST00000390882 IGHA2P01877 340 aa3.2□□□□□ -1.9
RNU6-440P-201ENST00000390882 INHBBP09529 407 aa3.2□□□□□ -1.9
RNU6-440P-201ENST00000390882 PSME1Q06323 249 aa3.2□□□□□ -1.9
RNU6-440P-201ENST00000390882 TYRO3Q06418 890 aa3.2□□□□□ -1.9
RNU6-440P-201ENST00000390882 RTN1Q16799 776 aa3.2□□□□□ -1.9
RNU6-440P-201ENST00000390882 CRTC2Q53ET0 693 aaPredicted RBP3.2□□□□□ -1.9
RNU6-440P-201ENST00000390882 AMIGO3Q86WK7 504 aa3.2□□□□□ -1.9
RNU6-440P-201ENST00000390882 ANKMY2Q8IV38 441 aa3.2□□□□□ -1.9
RNU6-440P-201ENST00000390882 ZDHHC1Q8WTX9 485 aa3.2□□□□□ -1.9
RNU6-440P-201ENST00000390882 RELTQ969Z4 430 aa3.2□□□□□ -1.9
RNU6-440P-201ENST00000390882 GSX2Q9BZM3 304 aa3.2□□□□□ -1.9
RNU6-440P-201ENST00000390882 TMPRSS5Q9H3S3 457 aa3.2□□□□□ -1.9
RNU6-440P-201ENST00000390882 USP17L15C9J2P7 530 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 USP17L10C9JJH3 530 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 USP17L13C9JLJ4 530 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 USP17L12C9JPN9 530 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 USP17L11C9JVI0 530 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 USP17L21D6R901 530 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 USP17L18D6R9N7 530 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 USP17L22D6RA61 530 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 USP17L17D6RBQ6 530 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 USP17L19D6RCP7 530 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 USP17L20D6RJB6 530 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 BACH1O14867 736 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 DKK1O94907 266 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 TSPAN15O95858 294 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 BMP3P12645 472 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 SEC13P55735 322 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 USP17L24Q0WX57 530 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 DPYDQ12882 1025 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 CCINQ13939 588 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 SIX5Q8N196 739 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 ARXQ96QS3 562 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 PPP1R16BQ96T49 567 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 SMG9Q9H0W8 520 aaKnown RBP3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 NOVA2Q9UNW9 492 aaKnown RBP3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 KIAA1024Q9UPX6 916 aa3.19□□□□□ -1.9
RNU6-440P-201ENST00000390882 TMEM229AB2RXF0 380 aa3.18□□□□□ -1.9
RNU6-440P-201ENST00000390882 ZBTB42B2RXF5 422 aa3.18□□□□□ -1.9
RNU6-440P-201ENST00000390882 M0R2N6 131 aa3.18□□□□□ -1.9
RNU6-440P-201ENST00000390882 SART1O43290 800 aaKnown RBP3.18□□□□□ -1.9
RNU6-440P-201ENST00000390882 F13BP05160 661 aa3.18□□□□□ -1.9
RNU6-440P-201ENST00000390882 NFKB1P19838 968 aa3.18□□□□□ -1.9
RNU6-440P-201ENST00000390882 ZNF792Q3KQV3 632 aa3.18□□□□□ -1.9
RNU6-440P-201ENST00000390882 IL22RA1Q8N6P7 574 aa3.18□□□□□ -1.9
RNU6-440P-201ENST00000390882 TPCN2Q8NHX9 752 aa3.18□□□□□ -1.9
RNU6-440P-201ENST00000390882 TRPM4Q8TD43 1214 aa3.18□□□□□ -1.9
RNU6-440P-201ENST00000390882 ZNF594Q96JF6 807 aaPredicted RBP3.18□□□□□ -1.9
RNU6-440P-201ENST00000390882 ZNF232Q9UNY5 417 aa3.18□□□□□ -1.9
RNU6-440P-201ENST00000390882 LRRC10BA6NIK2 292 aa3.17□□□□□ -1.9
RNU6-440P-201ENST00000390882 CYP26A1O43174 497 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms