RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 CCDC152Q4G0S7 254 aa11.62□□□□□ -0.55
TRAV20-201ENST00000390448 C2orf69Q8N8R5 385 aa11.62□□□□□ -0.55
TRAV20-201ENST00000390448 TBC1D16Q8TBP0 767 aa11.62□□□□□ -0.55
TRAV20-201ENST00000390448 PHAXQ9H814 394 aaKnown RBP11.62□□□□□ -0.55
TRAV20-201ENST00000390448 IFT57Q9NWB7 429 aa11.62□□□□□ -0.55
TRAV20-201ENST00000390448 ANKRD36CQ5JPF3 1778 aa11.62□□□□□ -0.55
TRAV20-201ENST00000390448 UFL1O94874 794 aa11.61□□□□□ -0.55
TRAV20-201ENST00000390448 BRPF1P55201 1214 aaPredicted RBP11.61□□□□□ -0.55
TRAV20-201ENST00000390448 NOGQ13253 232 aa11.61□□□□□ -0.55
TRAV20-201ENST00000390448 SULF1Q8IWU6 871 aa11.61□□□□□ -0.55
TRAV20-201ENST00000390448 CCDC85AQ96PX6 553 aaPredicted RBP11.61□□□□□ -0.55
TRAV20-201ENST00000390448 KCNQ5Q9NR82 932 aa11.61□□□□□ -0.55
TRAV20-201ENST00000390448 CWC25Q9NXE8 425 aaPredicted RBP11.61□□□□□ -0.55
TRAV20-201ENST00000390448 GGA1Q9UJY5 639 aa11.61□□□□□ -0.55
TRAV20-201ENST00000390448 KIF4BQ2VIQ3 1234 aa11.6□□□□□ -0.55
TRAV20-201ENST00000390448 CCDC30Q5VVM6 783 aa11.6□□□□□ -0.55
TRAV20-201ENST00000390448 ANKRD18AQ8IVF6 992 aa11.6□□□□□ -0.55
TRAV20-201ENST00000390448 CCDC191Q8NCU4 936 aa11.6□□□□□ -0.55
TRAV20-201ENST00000390448 GBA2Q9HCG7 927 aaPredicted RBP11.6□□□□□ -0.55
TRAV20-201ENST00000390448 SEC31BQ9NQW1 1179 aa11.6□□□□□ -0.55
TRAV20-201ENST00000390448 TRPM7Q96QT4 1865 aa11.59□□□□□ -0.55
TRAV20-201ENST00000390448 LAMB2P55268 1798 aa11.59□□□□□ -0.55
TRAV20-201ENST00000390448 PDE8AO60658 829 aa11.59□□□□□ -0.55
TRAV20-201ENST00000390448 PCCAP05165 728 aaPredicted RBP11.59□□□□□ -0.55
TRAV20-201ENST00000390448 ZNF157P51786 506 aaPredicted RBP11.59□□□□□ -0.55
TRAV20-201ENST00000390448 NEXNQ0ZGT2 675 aa11.59□□□□□ -0.55
TRAV20-201ENST00000390448 DLK2Q6UY11 383 aa11.59□□□□□ -0.55
TRAV20-201ENST00000390448 JARID2Q92833 1246 aaPredicted RBP11.59□□□□□ -0.55
TRAV20-201ENST00000390448 CCDC102AQ96A19 550 aa11.59□□□□□ -0.55
TRAV20-201ENST00000390448 PRKRIP1Q9H875 184 aaPredicted RBP11.59□□□□□ -0.55
TRAV20-201ENST00000390448 PODXL2Q9NZ53 605 aa11.59□□□□□ -0.55
TRAV20-201ENST00000390448 TAF1P21675 1872 aa11.58□□□□□ -0.56
TRAV20-201ENST00000390448 ADM5C9JUS6 153 aa11.58□□□□□ -0.56
TRAV20-201ENST00000390448 VIL1P09327 827 aaKnown RBP11.58□□□□□ -0.56
TRAV20-201ENST00000390448 ZNF853P0CG23 659 aa11.58□□□□□ -0.56
TRAV20-201ENST00000390448 RGMBQ6NW40 437 aa11.58□□□□□ -0.56
TRAV20-201ENST00000390448 C8orf58Q8NAV2 365 aa11.58□□□□□ -0.56
TRAV20-201ENST00000390448 CDC5LQ99459 802 aaKnown RBP11.58□□□□□ -0.56
TRAV20-201ENST00000390448 METTL22Q9BUU2 404 aaPredicted RBP11.58□□□□□ -0.56
TRAV20-201ENST00000390448 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
TRAV20-201ENST00000390448 MAP3K2Q9Y2U5 619 aa11.58□□□□□ -0.56
TRAV20-201ENST00000390448 RTL9Q8NET4 1388 aa11.57□□□□□ -0.56
TRAV20-201ENST00000390448 EGFRP00533 1210 aa11.57□□□□□ -0.56
TRAV20-201ENST00000390448 ATP2B4P23634 1241 aa11.57□□□□□ -0.56
TRAV20-201ENST00000390448 DGKZQ13574 1117 aa11.57□□□□□ -0.56
TRAV20-201ENST00000390448 SCARF1Q14162 830 aa11.57□□□□□ -0.56
TRAV20-201ENST00000390448 FAM161AQ3B820 660 aa11.57□□□□□ -0.56
TRAV20-201ENST00000390448 RSBN1LQ6PCB5 846 aaPredicted RBP11.57□□□□□ -0.56
TRAV20-201ENST00000390448 FBXW7Q969H0 707 aa11.57□□□□□ -0.56
TRAV20-201ENST00000390448 GGA3Q9NZ52 723 aa11.57□□□□□ -0.56
TRAV20-201ENST00000390448 XDHP47989 1333 aa11.57□□□□□ -0.56
TRAV20-201ENST00000390448 USP17L3A6NCW0 530 aa11.56□□□□□ -0.56
TRAV20-201ENST00000390448 USP17L4A6NCW7 530 aa11.56□□□□□ -0.56
TRAV20-201ENST00000390448 USP17L8P0C7I0 530 aa11.56□□□□□ -0.56
TRAV20-201ENST00000390448 MLLT1Q03111 559 aaPredicted RBP11.56□□□□□ -0.56
TRAV20-201ENST00000390448 KSR2Q6VAB6 950 aa11.56□□□□□ -0.56
TRAV20-201ENST00000390448 USP17L1Q7RTZ2 530 aa11.56□□□□□ -0.56
TRAV20-201ENST00000390448 AGBL3Q8NEM8 1001 aa11.56□□□□□ -0.56
TRAV20-201ENST00000390448 MCOLN1Q9GZU1 580 aa11.56□□□□□ -0.56
TRAV20-201ENST00000390448 DUOX1Q9NRD9 1551 aa11.56□□□□□ -0.56
TRAV20-201ENST00000390448 DDX60Q8IY21 1712 aaKnown RBP11.55□□□□□ -0.56
TRAV20-201ENST00000390448 PI4KAP2A4QPH2 592 aa11.55□□□□□ -0.56
TRAV20-201ENST00000390448 CTSWP56202 376 aa11.55□□□□□ -0.56
TRAV20-201ENST00000390448 KIF23Q02241 960 aaPredicted RBP11.55□□□□□ -0.56
TRAV20-201ENST00000390448 ANGEL2Q5VTE6 544 aaKnown RBP11.55□□□□□ -0.56
TRAV20-201ENST00000390448 PODNQ7Z5L7 613 aa11.55□□□□□ -0.56
TRAV20-201ENST00000390448 OGFOD1Q8N543 542 aa11.55□□□□□ -0.56
TRAV20-201ENST00000390448 PI4KAP1Q8N8J0 262 aa11.55□□□□□ -0.56
TRAV20-201ENST00000390448 ZIC5Q96T25 663 aa11.55□□□□□ -0.56
TRAV20-201ENST00000390448 TRPA1O75762 1119 aa11.54□□□□□ -0.56
TRAV20-201ENST00000390448 TTLL12Q14166 644 aaPredicted RBP11.54□□□□□ -0.56
TRAV20-201ENST00000390448 TSR2Q969E8 191 aaKnown RBP11.54□□□□□ -0.56
TRAV20-201ENST00000390448 CDCA5Q96FF9 252 aa11.54□□□□□ -0.56
TRAV20-201ENST00000390448 MYOZ2Q9NPC6 264 aa11.54□□□□□ -0.56
TRAV20-201ENST00000390448 LRRC37AA6NMS7 1700 aa11.54□□□□□ -0.56
TRAV20-201ENST00000390448 ASTN2O75129 1339 aaPredicted RBP11.54□□□□□ -0.56
TRAV20-201ENST00000390448 THSD7BQ9C0I4 1608 aa11.53□□□□□ -0.56
TRAV20-201ENST00000390448 SLC4A2P04920 1241 aa11.53□□□□□ -0.56
TRAV20-201ENST00000390448 IGHMBP2P38935 993 aaKnown RBP11.53□□□□□ -0.56
TRAV20-201ENST00000390448 ZNF280AP59817 542 aaPredicted RBP11.53□□□□□ -0.56
TRAV20-201ENST00000390448 TSPYL6Q8N831 410 aa11.53□□□□□ -0.56
TRAV20-201ENST00000390448 BSDC1Q9NW68 430 aaPredicted RBP11.53□□□□□ -0.56
TRAV20-201ENST00000390448 FAM155AB1AL88 458 aaPredicted RBP11.52□□□□□ -0.57
TRAV20-201ENST00000390448 KCNJ4P48050 445 aa11.52□□□□□ -0.57
TRAV20-201ENST00000390448 CWF19L2Q2TBE0 894 aaKnown RBP11.52□□□□□ -0.57
TRAV20-201ENST00000390448 TWISTNBQ3B726 338 aaPredicted RBP11.52□□□□□ -0.57
TRAV20-201ENST00000390448 UBE3BQ7Z3V4 1068 aa11.52□□□□□ -0.57
TRAV20-201ENST00000390448 REM2Q8IYK8 340 aaPredicted RBP11.52□□□□□ -0.57
TRAV20-201ENST00000390448 TTLL11Q8NHH1 800 aa11.52□□□□□ -0.57
TRAV20-201ENST00000390448 MPHOSPH8Q99549 860 aa11.52□□□□□ -0.57
TRAV20-201ENST00000390448 GREM2Q9H772 168 aa11.52□□□□□ -0.57
TRAV20-201ENST00000390448 RNF186Q9NXI6 227 aa11.52□□□□□ -0.57
TRAV20-201ENST00000390448 SAGE1Q9NXZ1 904 aa11.52□□□□□ -0.57
TRAV20-201ENST00000390448 MINPP1Q9UNW1 487 aa11.52□□□□□ -0.57
TRAV20-201ENST00000390448 NEURL1BA8MQ27 555 aa11.51□□□□□ -0.57
TRAV20-201ENST00000390448 IGKV5-2P06315 115 aa11.51□□□□□ -0.57
TRAV20-201ENST00000390448 SLC10A3P09131 477 aa11.51□□□□□ -0.57
TRAV20-201ENST00000390448 NF2P35240 595 aa11.51□□□□□ -0.57
TRAV20-201ENST00000390448 CCT4P50991 539 aaKnown RBP11.51□□□□□ -0.57
TRAV20-201ENST00000390448 FKBP1BP68106 108 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms