RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 ITGA6P23229 1130 aa11.33□□□□□ -0.6
TRBV27-201ENST00000390399 IGHMBP2P38935 993 aaKnown RBP11.33□□□□□ -0.6
TRBV27-201ENST00000390399 SCNN1DP51172 638 aa11.33□□□□□ -0.6
TRBV27-201ENST00000390399 CXCL9Q07325 125 aa11.33□□□□□ -0.6
TRBV27-201ENST00000390399 EAPPQ56P03 285 aaPredicted RBP11.33□□□□□ -0.6
TRBV27-201ENST00000390399 CIAPIN1Q6FI81 312 aa11.33□□□□□ -0.6
TRBV27-201ENST00000390399 CHADLQ6NUI6 762 aa11.33□□□□□ -0.6
TRBV27-201ENST00000390399 LDHDQ86WU2 507 aa11.33□□□□□ -0.6
TRBV27-201ENST00000390399 GPR101Q96P66 508 aaPredicted RBP11.33□□□□□ -0.6
TRBV27-201ENST00000390399 BSDC1Q9NW68 430 aaPredicted RBP11.33□□□□□ -0.6
TRBV27-201ENST00000390399 ADAMTSL1Q8N6G6 1762 aa11.33□□□□□ -0.6
TRBV27-201ENST00000390399 XDHP47989 1333 aa11.33□□□□□ -0.6
TRBV27-201ENST00000390399 ANKRD18BA2A2Z9 1011 aa11.32□□□□□ -0.6
TRBV27-201ENST00000390399 YDJCA8MPS7 323 aa11.32□□□□□ -0.6
TRBV27-201ENST00000390399 ECE2O60344 883 aa11.32□□□□□ -0.6
TRBV27-201ENST00000390399 RAD17O75943 681 aa11.32□□□□□ -0.6
TRBV27-201ENST00000390399 ATP2B4P23634 1241 aa11.32□□□□□ -0.6
TRBV27-201ENST00000390399 FOXO4P98177 505 aa11.32□□□□□ -0.6
TRBV27-201ENST00000390399 HNRNPUQ00839 825 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRBV27-201ENST00000390399 TNIP1Q15025 636 aa11.32□□□□□ -0.6
TRBV27-201ENST00000390399 PNMA8AQ86V59 439 aaPredicted RBP11.32□□□□□ -0.6
TRBV27-201ENST00000390399 ZC3H12CQ9C0D7 883 aaKnown RBP11.32□□□□□ -0.6
TRBV27-201ENST00000390399 DBNDD1Q9H9R9 158 aa11.32□□□□□ -0.6
TRBV27-201ENST00000390399 CHMP3Q9Y3E7 222 aa11.32□□□□□ -0.6
TRBV27-201ENST00000390399 G3V3G9 751 aa11.31□□□□□ -0.6
TRBV27-201ENST00000390399 EPS15P42566 896 aa11.31□□□□□ -0.6
TRBV27-201ENST00000390399 GMPSP49915 693 aaPredicted RBP11.31□□□□□ -0.6
TRBV27-201ENST00000390399 IFIT5Q13325 482 aaKnown RBP11.31□□□□□ -0.6
TRBV27-201ENST00000390399 DOK7Q18PE1 504 aa11.31□□□□□ -0.6
TRBV27-201ENST00000390399 DCAF8Q5TAQ9 597 aa11.31□□□□□ -0.6
TRBV27-201ENST00000390399 LMBR1LQ6UX01 489 aa11.31□□□□□ -0.6
TRBV27-201ENST00000390399 MPHOSPH8Q99549 860 aa11.31□□□□□ -0.6
TRBV27-201ENST00000390399 MINPP1Q9UNW1 487 aa11.31□□□□□ -0.6
TRBV27-201ENST00000390399 CLEC11AQ9Y240 323 aa11.31□□□□□ -0.6
TRBV27-201ENST00000390399 EPHA10Q5JZY3 1008 aa11.3□□□□□ -0.6
TRBV27-201ENST00000390399 SUCLG2Q96I99 432 aa11.3□□□□□ -0.6
TRBV27-201ENST00000390399 GPRC5DQ9NZD1 345 aa11.3□□□□□ -0.6
TRBV27-201ENST00000390399 MED23Q9ULK4 1368 aa11.29□□□□□ -0.6
TRBV27-201ENST00000390399 PSMD14O00487 310 aa11.29□□□□□ -0.6
TRBV27-201ENST00000390399 NBPF7P0C2Y1 421 aaPredicted RBP11.29□□□□□ -0.6
TRBV27-201ENST00000390399 CCT4P50991 539 aaKnown RBP11.29□□□□□ -0.6
TRBV27-201ENST00000390399 RARSP54136 660 aaKnown RBP11.29□□□□□ -0.6
TRBV27-201ENST00000390399 HTRA3P83110 453 aa11.29□□□□□ -0.6
TRBV27-201ENST00000390399 CCDC57Q2TAC2 916 aa11.29□□□□□ -0.6
TRBV27-201ENST00000390399 TAF7LQ5H9L4 462 aa11.29□□□□□ -0.6
TRBV27-201ENST00000390399 USP50Q70EL3 339 aaPredicted RBP11.29□□□□□ -0.6
TRBV27-201ENST00000390399 ANKRD2Q9GZV1 360 aa11.29□□□□□ -0.6
TRBV27-201ENST00000390399 NOB1Q9ULX3 412 aaKnown RBP11.29□□□□□ -0.6
TRBV27-201ENST00000390399 UTYO14607 1347 aa11.29□□□□□ -0.6
TRBV27-201ENST00000390399 A0A1B0GUL6 1792 aa11.28□□□□□ -0.6
TRBV27-201ENST00000390399 BRPF1P55201 1214 aaPredicted RBP11.28□□□□□ -0.6
TRBV27-201ENST00000390399 CHRNDQ07001 517 aa11.28□□□□□ -0.6
TRBV27-201ENST00000390399 MAP1SQ66K74 1059 aaPredicted RBP11.28□□□□□ -0.6
TRBV27-201ENST00000390399 API5Q9BZZ5 524 aaKnown RBP11.28□□□□□ -0.6
TRBV27-201ENST00000390399 ADARB2Q9NS39 739 aaKnown RBP11.28□□□□□ -0.6
TRBV27-201ENST00000390399 LEMD3Q9Y2U8 911 aa11.28□□□□□ -0.6
TRBV27-201ENST00000390399 ZBTB12Q9Y330 459 aaPredicted RBP11.28□□□□□ -0.6
TRBV27-201ENST00000390399 KIF16BQ96L93 1317 aa11.28□□□□□ -0.6
TRBV27-201ENST00000390399 CEP350Q5VT06 3117 aa11.28□□□□□ -0.6
TRBV27-201ENST00000390399 SCN9AQ15858 1988 aa11.27□□□□□ -0.61
TRBV27-201ENST00000390399 WTIPA6NIX2 430 aaPredicted RBP11.27□□□□□ -0.61
TRBV27-201ENST00000390399 RPS12P25398 132 aaKnown RBP11.27□□□□□ -0.61
TRBV27-201ENST00000390399 KCNJ4P48050 445 aa11.27□□□□□ -0.61
TRBV27-201ENST00000390399 MICALL2Q8IY33 904 aa11.27□□□□□ -0.61
TRBV27-201ENST00000390399 KAZALD1Q96I82 304 aa11.27□□□□□ -0.61
TRBV27-201ENST00000390399 ZNF594Q96JF6 807 aaPredicted RBP11.27□□□□□ -0.61
TRBV27-201ENST00000390399 BICC1Q9H694 974 aaKnown RBP11.27□□□□□ -0.61
TRBV27-201ENST00000390399 KCNQ5Q9NR82 932 aa11.27□□□□□ -0.61
TRBV27-201ENST00000390399 PSME4Q14997 1843 aa11.27□□□□□ -0.61
TRBV27-201ENST00000390399 ZNF804BA4D1E1 1349 aa11.27□□□□□ -0.61
TRBV27-201ENST00000390399 H7C1D1 291 aa11.26□□□□□ -0.61
TRBV27-201ENST00000390399 LDHAL6AQ6ZMR3 332 aa11.26□□□□□ -0.61
TRBV27-201ENST00000390399 PODNQ7Z5L7 613 aa11.26□□□□□ -0.61
TRBV27-201ENST00000390399 CNTROBQ8N137 903 aa11.26□□□□□ -0.61
TRBV27-201ENST00000390399 DPF2Q92785 391 aa11.26□□□□□ -0.61
TRBV27-201ENST00000390399 USP44Q9H0E7 712 aa11.26□□□□□ -0.61
TRBV27-201ENST00000390399 CNNM1Q9NRU3 951 aa11.26□□□□□ -0.61
TRBV27-201ENST00000390399 CNOT7Q9UIV1 285 aaKnown RBP11.26□□□□□ -0.61
TRBV27-201ENST00000390399 ZBED9Q6R2W3 1325 aa11.26□□□□□ -0.61
TRBV27-201ENST00000390399 PASKQ96RG2 1323 aa11.26□□□□□ -0.61
TRBV27-201ENST00000390399 SHTN1A0MZ66 631 aa11.25□□□□□ -0.61
TRBV27-201ENST00000390399 TAF5LO75529 589 aa11.25□□□□□ -0.61
TRBV27-201ENST00000390399 ITGBL1O95965 494 aaPredicted RBP11.25□□□□□ -0.61
TRBV27-201ENST00000390399 VIL1P09327 827 aaKnown RBP11.25□□□□□ -0.61
TRBV27-201ENST00000390399 KLRK1P26718 216 aa11.25□□□□□ -0.61
TRBV27-201ENST00000390399 RABL6Q3YEC7 729 aaPredicted RBP11.25□□□□□ -0.61
TRBV27-201ENST00000390399 DNAJC5GQ8N7S2 189 aa11.25□□□□□ -0.61
TRBV27-201ENST00000390399 ANKRD44Q8N8A2 993 aa11.25□□□□□ -0.61
TRBV27-201ENST00000390399 HELBQ8NG08 1087 aaPredicted RBP11.25□□□□□ -0.61
TRBV27-201ENST00000390399 TRPM4Q8TD43 1214 aa11.25□□□□□ -0.61
TRBV27-201ENST00000390399 COA1Q9GZY4 146 aa11.25□□□□□ -0.61
TRBV27-201ENST00000390399 ZNF609O15014 1411 aa11.25□□□□□ -0.61
TRBV27-201ENST00000390399 USP17L3A6NCW0 530 aa11.24□□□□□ -0.61
TRBV27-201ENST00000390399 USP17L4A6NCW7 530 aa11.24□□□□□ -0.61
TRBV27-201ENST00000390399 RSBN1LQ6PCB5 846 aaPredicted RBP11.24□□□□□ -0.61
TRBV27-201ENST00000390399 USP17L1Q7RTZ2 530 aa11.24□□□□□ -0.61
TRBV27-201ENST00000390399 TXNRD3Q86VQ6 643 aa11.24□□□□□ -0.61
TRBV27-201ENST00000390399 ARHGAP45Q92619 1136 aa11.24□□□□□ -0.61
TRBV27-201ENST00000390399 FBXW7Q969H0 707 aa11.24□□□□□ -0.61
TRBV27-201ENST00000390399 KLRG1Q96E93 195 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms