RNA–Protein interactions for RNA: ENST00000390387.3

TRBV3-1-201, Transcript of T cell receptor beta variable 3-1, humanhuman

APPRIS P1 BASIC

Gene TRBV3-1, Length 391 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV3-1-201ENST00000390387 IRS4O14654 1257 aaPredicted RBP12.15□□□□□ -0.46
TRBV3-1-201ENST00000390387 ECE2O60344 883 aa12.15□□□□□ -0.46
TRBV3-1-201ENST00000390387 ABCB7O75027 752 aa12.15□□□□□ -0.46
TRBV3-1-201ENST00000390387 RPS12P25398 132 aaKnown RBP12.15□□□□□ -0.46
TRBV3-1-201ENST00000390387 RGS19P49795 217 aa12.15□□□□□ -0.46
TRBV3-1-201ENST00000390387 NOGQ13253 232 aa12.15□□□□□ -0.46
TRBV3-1-201ENST00000390387 TRIM28Q13263 835 aaKnown RBP12.15□□□□□ -0.46
TRBV3-1-201ENST00000390387 DOK7Q18PE1 504 aa12.15□□□□□ -0.46
TRBV3-1-201ENST00000390387 TBC1D16Q8TBP0 767 aa12.15□□□□□ -0.46
TRBV3-1-201ENST00000390387 MCOLN1Q9GZU1 580 aa12.15□□□□□ -0.46
TRBV3-1-201ENST00000390387 HYPKQ9NX55 129 aa12.15□□□□□ -0.46
TRBV3-1-201ENST00000390387 ADM5C9JUS6 153 aa12.14□□□□□ -0.47
TRBV3-1-201ENST00000390387 SLC4A2P04920 1241 aa12.14□□□□□ -0.47
TRBV3-1-201ENST00000390387 RPS8P62241 208 aaKnown RBP12.14□□□□□ -0.47
TRBV3-1-201ENST00000390387 DUSP27Q5VZP5 1158 aa12.14□□□□□ -0.47
TRBV3-1-201ENST00000390387 KRT26Q7Z3Y9 468 aa12.14□□□□□ -0.47
TRBV3-1-201ENST00000390387 CFAP44Q96MT7 982 aa12.14□□□□□ -0.47
TRBV3-1-201ENST00000390387 EYA3Q99504 573 aa12.14□□□□□ -0.47
TRBV3-1-201ENST00000390387 FAM155AB1AL88 458 aaPredicted RBP12.13□□□□□ -0.47
TRBV3-1-201ENST00000390387 MLLT1Q03111 559 aaPredicted RBP12.13□□□□□ -0.47
TRBV3-1-201ENST00000390387 WDR43Q15061 677 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRBV3-1-201ENST00000390387 RBM26Q5T8P6 1007 aaKnown RBP12.13□□□□□ -0.47
TRBV3-1-201ENST00000390387 RGMBQ6NW40 437 aa12.13□□□□□ -0.47
TRBV3-1-201ENST00000390387 GBA2Q9HCG7 927 aaPredicted RBP12.13□□□□□ -0.47
TRBV3-1-201ENST00000390387 SEC31BQ9NQW1 1179 aa12.13□□□□□ -0.47
TRBV3-1-201ENST00000390387 MBIPQ9NS73 344 aa12.13□□□□□ -0.47
TRBV3-1-201ENST00000390387 PODXL2Q9NZ53 605 aa12.13□□□□□ -0.47
TRBV3-1-201ENST00000390387 ADAMTS8Q9UP79 889 aa12.13□□□□□ -0.47
TRBV3-1-201ENST00000390387 SCN9AQ15858 1988 aa12.12□□□□□ -0.47
TRBV3-1-201ENST00000390387 CASP8AP2Q9UKL3 1982 aa12.12□□□□□ -0.47
TRBV3-1-201ENST00000390387 TNRC18O15417 2968 aaPredicted RBP12.12□□□□□ -0.47
TRBV3-1-201ENST00000390387 VIL1P09327 827 aaKnown RBP12.12□□□□□ -0.47
TRBV3-1-201ENST00000390387 ZNF853P0CG23 659 aa12.12□□□□□ -0.47
TRBV3-1-201ENST00000390387 KIF4BQ2VIQ3 1234 aa12.12□□□□□ -0.47
TRBV3-1-201ENST00000390387 ZBTB38Q8NAP3 1195 aaPredicted RBP12.12□□□□□ -0.47
TRBV3-1-201ENST00000390387 DCPSQ96C86 337 aaKnown RBP12.12□□□□□ -0.47
TRBV3-1-201ENST00000390387 ZNF609O15014 1411 aa12.11□□□□□ -0.47
TRBV3-1-201ENST00000390387 UFL1O94874 794 aa12.11□□□□□ -0.47
TRBV3-1-201ENST00000390387 SLC34A2O95436 690 aa12.11□□□□□ -0.47
TRBV3-1-201ENST00000390387 DDX10Q13206 875 aaKnown RBP12.11□□□□□ -0.47
TRBV3-1-201ENST00000390387 DGKZQ13574 1117 aa12.11□□□□□ -0.47
TRBV3-1-201ENST00000390387 RIC3Q7Z5B4 369 aa12.11□□□□□ -0.47
TRBV3-1-201ENST00000390387 C2orf69Q8N8R5 385 aa12.11□□□□□ -0.47
TRBV3-1-201ENST00000390387 ZC3H12CQ9C0D7 883 aaKnown RBP12.11□□□□□ -0.47
TRBV3-1-201ENST00000390387 PHAXQ9H814 394 aaKnown RBP12.11□□□□□ -0.47
TRBV3-1-201ENST00000390387 GGA3Q9NZ52 723 aa12.11□□□□□ -0.47
TRBV3-1-201ENST00000390387 ASTN2O75129 1339 aaPredicted RBP12.11□□□□□ -0.47
TRBV3-1-201ENST00000390387 KIF23Q02241 960 aaPredicted RBP12.1□□□□□ -0.47
TRBV3-1-201ENST00000390387 GOLGA2Q08379 1002 aa12.1□□□□□ -0.47
TRBV3-1-201ENST00000390387 CCDC102AQ96A19 550 aa12.1□□□□□ -0.47
TRBV3-1-201ENST00000390387 MYD88Q99836 296 aa12.1□□□□□ -0.47
TRBV3-1-201ENST00000390387 SAGE1Q9NXZ1 904 aa12.1□□□□□ -0.47
TRBV3-1-201ENST00000390387 GGA1Q9UJY5 639 aa12.1□□□□□ -0.47
TRBV3-1-201ENST00000390387 POLR2AP24928 1970 aaKnown RBP12.1□□□□□ -0.47
TRBV3-1-201ENST00000390387 PCCAP05165 728 aaPredicted RBP12.09□□□□□ -0.47
TRBV3-1-201ENST00000390387 SLC10A3P09131 477 aa12.09□□□□□ -0.47
TRBV3-1-201ENST00000390387 ZNF157P51786 506 aaPredicted RBP12.09□□□□□ -0.47
TRBV3-1-201ENST00000390387 ZNF280AP59817 542 aaPredicted RBP12.09□□□□□ -0.47
TRBV3-1-201ENST00000390387 CCDC152Q4G0S7 254 aa12.09□□□□□ -0.47
TRBV3-1-201ENST00000390387 RSBN1LQ6PCB5 846 aaPredicted RBP12.09□□□□□ -0.47
TRBV3-1-201ENST00000390387 SULF1Q8IWU6 871 aa12.09□□□□□ -0.47
TRBV3-1-201ENST00000390387 CCDC191Q8NCU4 936 aa12.09□□□□□ -0.47
TRBV3-1-201ENST00000390387 CDCA5Q96FF9 252 aa12.09□□□□□ -0.47
TRBV3-1-201ENST00000390387 IFT57Q9NWB7 429 aa12.09□□□□□ -0.47
TRBV3-1-201ENST00000390387 ANKIB1Q9P2G1 1089 aa12.09□□□□□ -0.47
TRBV3-1-201ENST00000390387 ELL2O00472 640 aaPredicted RBP12.08□□□□□ -0.48
TRBV3-1-201ENST00000390387 PDE8AO60658 829 aa12.08□□□□□ -0.48
TRBV3-1-201ENST00000390387 HSP90B1P14625 803 aaKnown RBP12.08□□□□□ -0.48
TRBV3-1-201ENST00000390387 JARID2Q92833 1246 aaPredicted RBP12.08□□□□□ -0.48
TRBV3-1-201ENST00000390387 CCDC85AQ96PX6 553 aaPredicted RBP12.08□□□□□ -0.48
TRBV3-1-201ENST00000390387 GMLQ99445 158 aa12.08□□□□□ -0.48
TRBV3-1-201ENST00000390387 CWC25Q9NXE8 425 aaPredicted RBP12.08□□□□□ -0.48
TRBV3-1-201ENST00000390387 RNF186Q9NXI6 227 aa12.08□□□□□ -0.48
TRBV3-1-201ENST00000390387 PSME4Q14997 1843 aa12.07□□□□□ -0.48
TRBV3-1-201ENST00000390387 G3V3G9 751 aa12.07□□□□□ -0.48
TRBV3-1-201ENST00000390387 APAF1O14727 1248 aa12.07□□□□□ -0.48
TRBV3-1-201ENST00000390387 TRPA1O75762 1119 aa12.07□□□□□ -0.48
TRBV3-1-201ENST00000390387 GNAI1P63096 354 aa12.07□□□□□ -0.48
TRBV3-1-201ENST00000390387 SCARF1Q14162 830 aa12.07□□□□□ -0.48
TRBV3-1-201ENST00000390387 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
TRBV3-1-201ENST00000390387 ANGEL2Q5VTE6 544 aaKnown RBP12.07□□□□□ -0.48
TRBV3-1-201ENST00000390387 C8orf58Q8NAV2 365 aa12.07□□□□□ -0.48
TRBV3-1-201ENST00000390387 AGBL3Q8NEM8 1001 aa12.07□□□□□ -0.48
TRBV3-1-201ENST00000390387 METTL22Q9BUU2 404 aaPredicted RBP12.07□□□□□ -0.48
TRBV3-1-201ENST00000390387 XDHP47989 1333 aa12.07□□□□□ -0.48
TRBV3-1-201ENST00000390387 WTIPA6NIX2 430 aaPredicted RBP12.06□□□□□ -0.48
TRBV3-1-201ENST00000390387 RASAL3Q86YV0 1011 aa12.06□□□□□ -0.48
TRBV3-1-201ENST00000390387 CSRNP1Q96S65 589 aa12.06□□□□□ -0.48
TRBV3-1-201ENST00000390387 MYOZ2Q9NPC6 264 aa12.06□□□□□ -0.48
TRBV3-1-201ENST00000390387 PAPPA2Q9BXP8 1791 aa12.05□□□□□ -0.48
TRBV3-1-201ENST00000390387 USP17L8P0C7I0 530 aa12.05□□□□□ -0.48
TRBV3-1-201ENST00000390387 ATP2B4P23634 1241 aa12.05□□□□□ -0.48
TRBV3-1-201ENST00000390387 PODNQ7Z5L7 613 aa12.05□□□□□ -0.48
TRBV3-1-201ENST00000390387 ANKRD18AQ8IVF6 992 aa12.05□□□□□ -0.48
TRBV3-1-201ENST00000390387 PRKRIP1Q9H875 184 aaPredicted RBP12.05□□□□□ -0.48
TRBV3-1-201ENST00000390387 PITPNM2Q9BZ72 1349 aa12.05□□□□□ -0.48
TRBV3-1-201ENST00000390387 MED23Q9ULK4 1368 aa12.05□□□□□ -0.48
TRBV3-1-201ENST00000390387 USP17L3A6NCW0 530 aa12.04□□□□□ -0.48
TRBV3-1-201ENST00000390387 USP17L4A6NCW7 530 aa12.04□□□□□ -0.48
TRBV3-1-201ENST00000390387 DDX58O95786 925 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms