RNA–Protein interactions for RNA: ENST00000389428.7

SEMA6D-206, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 5,874 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-206ENST00000389428 SMC1BQ8NDV3 1235 aa13.56□□□□□ -0.24
SEMA6D-206ENST00000389428 CCT6BQ92526 530 aa13.56□□□□□ -0.24
SEMA6D-206ENST00000389428 C6orf50Q9HD87 102 aa13.56□□□□□ -0.24
SEMA6D-206ENST00000389428 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.56□□□□□ -0.24
SEMA6D-206ENST00000389428 PSMA7O14818 248 aa13.56□□□□□ -0.24
SEMA6D-206ENST00000389428 CIB2O75838 187 aa13.56□□□□□ -0.24
SEMA6D-206ENST00000389428 CALM1P0DP23 149 aa13.56□□□□□ -0.24
SEMA6D-206ENST00000389428 CALM2P0DP24 149 aa13.56□□□□□ -0.24
SEMA6D-206ENST00000389428 CALM3P0DP25 149 aa13.56□□□□□ -0.24
SEMA6D-206ENST00000389428 CRCPO75575 148 aa13.55□□□□□ -0.24
SEMA6D-206ENST00000389428 RPUSD2Q8IZ73 545 aaKnown RBP13.55□□□□□ -0.24
SEMA6D-206ENST00000389428 ESR2Q92731 530 aa13.55□□□□□ -0.24
SEMA6D-206ENST00000389428 TNPO1Q92973 898 aaKnown RBP13.55□□□□□ -0.24
SEMA6D-206ENST00000389428 MAK16Q9BXY0 300 aaKnown RBP13.55□□□□□ -0.24
SEMA6D-206ENST00000389428 NSD2O96028 1365 aa13.55□□□□□ -0.24
SEMA6D-206ENST00000389428 RTN1Q16799 776 aa13.55□□□□□ -0.24
SEMA6D-206ENST00000389428 USHBP1Q8N6Y0 703 aa13.55□□□□□ -0.24
SEMA6D-206ENST00000389428 MNAT1P51948 309 aa13.55□□□□□ -0.24
SEMA6D-206ENST00000389428 LDHAL6AQ6ZMR3 332 aa13.55□□□□□ -0.24
SEMA6D-206ENST00000389428 GPTP24298 496 aa13.55□□□□□ -0.24
SEMA6D-206ENST00000389428 SRRTQ9BXP5 876 aaKnown RBP13.55□□□□□ -0.24
SEMA6D-206ENST00000389428 CTAGE9A4FU28 777 aa13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 RBM27Q9P2N5 1060 aaKnown RBP13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 IFT140Q96RY7 1462 aa13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 ERCC6LQ2NKX8 1250 aa13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 IFNL2Q8IZJ0 200 aa13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 WDR66Q8TBY9 1149 aa13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 IPO4Q8TEX9 1081 aaKnown RBP13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 PRPF31Q8WWY3 499 aaKnown RBP13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 ZBTB43O43298 467 aa13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 ATP5DP30049 168 aa13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 ZNF165P49910 485 aa13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 NAPAP54920 295 aa13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 RRP36Q96EU6 259 aaKnown RBP13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 TRIM7Q9C029 511 aa13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 MTRF1LQ9UGC7 380 aaKnown RBP13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 ASIC1P78348 528 aa13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 SLC4A4Q9Y6R1 1079 aa13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 TROQ12816 1431 aaPredicted RBP13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 MAPK8IP2Q13387 824 aaPredicted RBP13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 SETDB1Q15047 1291 aa13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 C16orf71Q8IYS4 520 aaPredicted RBP13.54□□□□□ -0.24
SEMA6D-206ENST00000389428 GOLGA1Q92805 767 aa13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 ZBTB3Q9H5J0 574 aa13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 MRC2Q9UBG0 1479 aa13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 AFMP43652 599 aa13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 KRT222Q8N1A0 295 aa13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 ANKRD24Q8TF21 1146 aa13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 ALG1Q9BT22 464 aa13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 SEL1L2Q5TEA6 688 aa13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 PANK2Q9BZ23 570 aa13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 KLF18A0A0U1RQI7 1052 aa13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 ADAMTS2O95450 1211 aa13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 RARSP54136 660 aaKnown RBP13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 NBPF6Q5VWK0 638 aa13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 NBPF5PQ86XG9 351 aaPredicted RBP13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 NEK11Q8NG66 645 aa13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 NBPF4Q96M43 638 aa13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 SEC62Q99442 399 aaKnown RBP13.53□□□□□ -0.24
SEMA6D-206ENST00000389428 SWAP70Q9UH65 585 aa13.52□□□□□ -0.24
SEMA6D-206ENST00000389428 KRT2P35908 639 aa13.52□□□□□ -0.24
SEMA6D-206ENST00000389428 SLC4A8Q2Y0W8 1093 aa13.52□□□□□ -0.24
SEMA6D-206ENST00000389428 ISM2Q6H9L7 571 aa13.52□□□□□ -0.24
SEMA6D-206ENST00000389428 WDR70Q9NW82 654 aa13.52□□□□□ -0.24
SEMA6D-206ENST00000389428 PHF8Q9UPP1 1060 aa13.52□□□□□ -0.24
SEMA6D-206ENST00000389428 ZSCAN22P10073 491 aaPredicted RBP13.52□□□□□ -0.25
SEMA6D-206ENST00000389428 CYP7A1P22680 504 aa13.52□□□□□ -0.25
SEMA6D-206ENST00000389428 PPP1R7Q15435 360 aa13.52□□□□□ -0.25
SEMA6D-206ENST00000389428 KRT86O43790 486 aa13.52□□□□□ -0.25
SEMA6D-206ENST00000389428 HAND2P61296 217 aa13.52□□□□□ -0.25
SEMA6D-206ENST00000389428 FLIIQ13045 1269 aa13.52□□□□□ -0.25
SEMA6D-206ENST00000389428 SPDYE3A6NKU9 549 aa13.52□□□□□ -0.25
SEMA6D-206ENST00000389428 DPH6Q7L8W6 267 aa13.52□□□□□ -0.25
SEMA6D-206ENST00000389428 NGLY1Q96IV0 654 aa13.52□□□□□ -0.25
SEMA6D-206ENST00000389428 TTC22Q5TAA0 569 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 ZMYND15Q9H091 742 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 ARFGAP3Q9NP61 516 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 PODXL2Q9NZ53 605 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 SAMD15Q9P1V8 674 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 TFIP11Q9UBB9 837 aaKnown RBP13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 MTUS1Q9ULD2 1270 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 GNAT2P19087 354 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 AFAP1L2Q8N4X5 818 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 GABPB2Q8TAK5 448 aaPredicted RBP13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 MRPS27Q92552 414 aaKnown RBP13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 FAM184BQ9ULE4 1060 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 ATRIPQ8WXE1 791 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 STIM2Q9P246 746 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 GTF2A1P52655 376 aaPredicted RBP13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 SSH1Q8WYL5 1049 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 NYXQ9GZU5 481 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 CSRNP2Q9H175 543 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 F6X3S4 739 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 TNNC1P63316 161 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 PLCB3Q01970 1234 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 MAP7Q14244 749 aa13.51□□□□□ -0.25
SEMA6D-206ENST00000389428 KRT79Q5XKE5 535 aa13.5□□□□□ -0.25
SEMA6D-206ENST00000389428 CCDC114Q96M63 670 aa13.5□□□□□ -0.25
SEMA6D-206ENST00000389428 ZSWIM4Q9H7M6 989 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms