RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 TCIRG1Q13488 830 aa12.7□□□□□ -0.38
IFT88-203ENST00000389373 SCARF1Q14162 830 aa12.7□□□□□ -0.38
IFT88-203ENST00000389373 TTLL12Q14166 644 aaPredicted RBP12.7□□□□□ -0.38
IFT88-203ENST00000389373 XAGE3Q8WTP9 111 aa12.7□□□□□ -0.38
IFT88-203ENST00000389373 ZC3H12CQ9C0D7 883 aaKnown RBP12.7□□□□□ -0.38
IFT88-203ENST00000389373 POLR2AP24928 1970 aaKnown RBP12.7□□□□□ -0.38
IFT88-203ENST00000389373 RTL9Q8NET4 1388 aa12.69□□□□□ -0.38
IFT88-203ENST00000389373 GPR25O00155 361 aa12.69□□□□□ -0.38
IFT88-203ENST00000389373 RTL5Q5HYW3 569 aaPredicted RBP12.69□□□□□ -0.38
IFT88-203ENST00000389373 HABP4Q5JVS0 413 aaKnown RBP12.69□□□□□ -0.38
IFT88-203ENST00000389373 PRAMEF18Q5VWM3 479 aa12.69□□□□□ -0.38
IFT88-203ENST00000389373 FBXO46Q6PJ61 603 aaPredicted RBP12.69□□□□□ -0.38
IFT88-203ENST00000389373 LRP10Q7Z4F1 713 aa12.69□□□□□ -0.38
IFT88-203ENST00000389373 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.69□□□□□ -0.38
IFT88-203ENST00000389373 VIL1P09327 827 aaKnown RBP12.68□□□□□ -0.38
IFT88-203ENST00000389373 NFE2L2Q16236 605 aa12.68□□□□□ -0.38
IFT88-203ENST00000389373 FAM89AQ96GI7 184 aa12.68□□□□□ -0.38
IFT88-203ENST00000389373 KDM3BQ7LBC6 1761 aa12.67□□□□□ -0.38
IFT88-203ENST00000389373 FKBP1BP68106 108 aa12.67□□□□□ -0.38
IFT88-203ENST00000389373 TBC1D16Q8TBP0 767 aa12.67□□□□□ -0.38
IFT88-203ENST00000389373 DUOX1Q9NRD9 1551 aa12.67□□□□□ -0.38
IFT88-203ENST00000389373 TAF1P21675 1872 aa12.67□□□□□ -0.38
IFT88-203ENST00000389373 ATP5J2-PTCD1G3V325 749 aa12.66□□□□□ -0.38
IFT88-203ENST00000389373 FKTNO75072 461 aa12.66□□□□□ -0.38
IFT88-203ENST00000389373 UFL1O94874 794 aa12.66□□□□□ -0.38
IFT88-203ENST00000389373 RSBN1LQ6PCB5 846 aaPredicted RBP12.66□□□□□ -0.38
IFT88-203ENST00000389373 ANKIB1Q9P2G1 1089 aa12.66□□□□□ -0.38
IFT88-203ENST00000389373 LAMB2P55268 1798 aa12.66□□□□□ -0.38
IFT88-203ENST00000389373 MAPK8IP3Q9UPT6 1336 aa12.65□□□□□ -0.38
IFT88-203ENST00000389373 TM4SF4P48230 202 aa12.65□□□□□ -0.38
IFT88-203ENST00000389373 RPS8P62241 208 aaKnown RBP12.65□□□□□ -0.38
IFT88-203ENST00000389373 PRKG1Q13976 671 aa12.65□□□□□ -0.38
IFT88-203ENST00000389373 SF3B3Q15393 1217 aaKnown RBP12.65□□□□□ -0.38
IFT88-203ENST00000389373 MYOZ2Q9NPC6 264 aa12.65□□□□□ -0.38
IFT88-203ENST00000389373 ANKRD36CQ5JPF3 1778 aa12.64□□□□□ -0.39
IFT88-203ENST00000389373 ZNF280AP59817 542 aaPredicted RBP12.64□□□□□ -0.39
IFT88-203ENST00000389373 AGBL3Q8NEM8 1001 aa12.64□□□□□ -0.39
IFT88-203ENST00000389373 PLEKHF1Q96S99 279 aa12.64□□□□□ -0.39
IFT88-203ENST00000389373 R3HDMLQ9H3Y0 253 aa12.64□□□□□ -0.39
IFT88-203ENST00000389373 GGA1Q9UJY5 639 aa12.64□□□□□ -0.39
IFT88-203ENST00000389373 POTEFA5A3E0 1075 aa12.63□□□□□ -0.39
IFT88-203ENST00000389373 IRS4O14654 1257 aaPredicted RBP12.63□□□□□ -0.39
IFT88-203ENST00000389373 USP17L8P0C7I0 530 aa12.63□□□□□ -0.39
IFT88-203ENST00000389373 NF2P35240 595 aa12.63□□□□□ -0.39
IFT88-203ENST00000389373 SREBF2Q12772 1141 aa12.63□□□□□ -0.39
IFT88-203ENST00000389373 FBXW7Q969H0 707 aa12.63□□□□□ -0.39
IFT88-203ENST00000389373 TRIM17Q9Y577 477 aa12.63□□□□□ -0.39
IFT88-203ENST00000389373 RIPK4P57078 832 aa12.62□□□□□ -0.39
IFT88-203ENST00000389373 NBPF9Q3BBW0 867 aa12.62□□□□□ -0.39
IFT88-203ENST00000389373 ANKRD13DQ6ZTN6 518 aa12.62□□□□□ -0.39
IFT88-203ENST00000389373 PNNQ9H307 717 aaKnown RBP12.62□□□□□ -0.39
IFT88-203ENST00000389373 SEC31BQ9NQW1 1179 aa12.62□□□□□ -0.39
IFT88-203ENST00000389373 LAS1LQ9Y4W2 734 aaKnown RBP12.62□□□□□ -0.39
IFT88-203ENST00000389373 PITPNM2Q9BZ72 1349 aa12.62□□□□□ -0.39
IFT88-203ENST00000389373 PAPPA2Q9BXP8 1791 aa12.61□□□□□ -0.39
IFT88-203ENST00000389373 DLG5Q8TDM6 1919 aa12.61□□□□□ -0.39
IFT88-203ENST00000389373 USP17L3A6NCW0 530 aa12.61□□□□□ -0.39
IFT88-203ENST00000389373 USP17L4A6NCW7 530 aa12.61□□□□□ -0.39
IFT88-203ENST00000389373 PTPN12Q05209 780 aaKnown RBP12.61□□□□□ -0.39
IFT88-203ENST00000389373 KRT24Q2M2I5 525 aa12.61□□□□□ -0.39
IFT88-203ENST00000389373 NOM1Q5C9Z4 860 aaKnown RBP12.61□□□□□ -0.39
IFT88-203ENST00000389373 USP17L1Q7RTZ2 530 aa12.61□□□□□ -0.39
IFT88-203ENST00000389373 ARMC9Q7Z3E5 817 aa12.61□□□□□ -0.39
IFT88-203ENST00000389373 PLBD2Q8NHP8 589 aa12.61□□□□□ -0.39
IFT88-203ENST00000389373 CCDC85AQ96PX6 553 aaPredicted RBP12.61□□□□□ -0.39
IFT88-203ENST00000389373 ISCA1Q9BUE6 129 aa12.61□□□□□ -0.39
IFT88-203ENST00000389373 CHPF2Q9P2E5 772 aa12.61□□□□□ -0.39
IFT88-203ENST00000389373 LRRC37AA6NMS7 1700 aa12.6□□□□□ -0.39
IFT88-203ENST00000389373 INTS3Q68E01 1043 aaKnown RBP12.6□□□□□ -0.39
IFT88-203ENST00000389373 MXD3Q9BW11 206 aa12.6□□□□□ -0.39
IFT88-203ENST00000389373 PODXL2Q9NZ53 605 aa12.6□□□□□ -0.39
IFT88-203ENST00000389373 COL4A1P02462 1669 aa12.59□□□□□ -0.39
IFT88-203ENST00000389373 EN2P19622 333 aaPredicted RBP12.59□□□□□ -0.39
IFT88-203ENST00000389373 OTOP1Q7RTM1 612 aa12.59□□□□□ -0.39
IFT88-203ENST00000389373 GMLQ99445 158 aa12.59□□□□□ -0.39
IFT88-203ENST00000389373 ALDH1A1P00352 501 aa12.58□□□□□ -0.4
IFT88-203ENST00000389373 FXR1P51114 621 aaKnown RBP eCLIP12.58□□□□□ -0.4
IFT88-203ENST00000389373 NEUROD2Q15784 382 aa12.58□□□□□ -0.4
IFT88-203ENST00000389373 HDGFL1Q5TGJ6 251 aa12.58□□□□□ -0.4
IFT88-203ENST00000389373 SPRYD7Q5W111 196 aa12.58□□□□□ -0.4
IFT88-203ENST00000389373 OGFOD1Q8N543 542 aa12.58□□□□□ -0.4
IFT88-203ENST00000389373 JARID2Q92833 1246 aaPredicted RBP12.58□□□□□ -0.4
IFT88-203ENST00000389373 ANGEL1Q9UNK9 670 aaKnown RBP12.58□□□□□ -0.4
IFT88-203ENST00000389373 FZD1Q9UP38 647 aa12.58□□□□□ -0.4
IFT88-203ENST00000389373 SCN9AQ15858 1988 aa12.58□□□□□ -0.4
IFT88-203ENST00000389373 WNT10BO00744 389 aa12.57□□□□□ -0.4
IFT88-203ENST00000389373 SASH1O94885 1247 aa12.57□□□□□ -0.4
IFT88-203ENST00000389373 ATP2B4P23634 1241 aa12.57□□□□□ -0.4
IFT88-203ENST00000389373 PODNQ7Z5L7 613 aa12.57□□□□□ -0.4
IFT88-203ENST00000389373 ANKRD18AQ8IVF6 992 aa12.57□□□□□ -0.4
IFT88-203ENST00000389373 CD99L2Q8TCZ2 262 aa12.57□□□□□ -0.4
IFT88-203ENST00000389373 SLC10A4Q96EP9 437 aa12.57□□□□□ -0.4
IFT88-203ENST00000389373 BABAM1Q9NWV8 329 aa12.57□□□□□ -0.4
IFT88-203ENST00000389373 DDX60Q8IY21 1712 aaKnown RBP12.57□□□□□ -0.4
IFT88-203ENST00000389373 CCDC152Q4G0S7 254 aa12.56□□□□□ -0.4
IFT88-203ENST00000389373 RIC3Q7Z5B4 369 aa12.56□□□□□ -0.4
IFT88-203ENST00000389373 IFNL1Q8IU54 200 aa12.56□□□□□ -0.4
IFT88-203ENST00000389373 ZBTB38Q8NAP3 1195 aaPredicted RBP12.56□□□□□ -0.4
IFT88-203ENST00000389373 TMEM106CQ9BVX2 250 aa12.56□□□□□ -0.4
IFT88-203ENST00000389373 CFHR5Q9BXR6 569 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms