RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 METTL24Q5JXM2 366 aa15.14■□□□□ 0.01
TRAPPC9-201ENST00000389328 CACTINQ8WUQ7 758 aaKnown RBP15.14■□□□□ 0.01
TRAPPC9-201ENST00000389328 SRRTQ9BXP5 876 aaKnown RBP15.14■□□□□ 0.01
TRAPPC9-201ENST00000389328 LZTFL1Q9NQ48 299 aa15.14■□□□□ 0.01
TRAPPC9-201ENST00000389328 KIAA0232Q92628 1395 aa15.14■□□□□ 0.01
TRAPPC9-201ENST00000389328 DDIT3P35638 169 aa15.14■□□□□ 0.01
TRAPPC9-201ENST00000389328 METAP2P50579 478 aaKnown RBP eCLIP15.14■□□□□ 0.01
TRAPPC9-201ENST00000389328 WASF1Q92558 559 aa15.14■□□□□ 0.01
TRAPPC9-201ENST00000389328 ALG1Q9BT22 464 aa15.14■□□□□ 0.01
TRAPPC9-201ENST00000389328 LSG1Q9H089 658 aaKnown RBP15.14■□□□□ 0.01
TRAPPC9-201ENST00000389328 CAPN2P17655 700 aa15.14■□□□□ 0.01
TRAPPC9-201ENST00000389328 UTP14CQ5TAP6 766 aaKnown RBP15.14■□□□□ 0.01
TRAPPC9-201ENST00000389328 ANKRD13DQ6ZTN6 518 aa15.14■□□□□ 0.01
TRAPPC9-201ENST00000389328 FLT4P35916 1363 aa15.14■□□□□ 0.01
TRAPPC9-201ENST00000389328 SSH2Q76I76 1423 aa15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 TM6SF1Q9BZW5 370 aa15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 SLC12A7Q9Y666 1083 aa15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 IFIT3O14879 490 aaKnown RBP15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 SMARCC1Q92922 1105 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 ZBTB3Q9H5J0 574 aa15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 RSPH14Q9UHP6 348 aa15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 TFCP2Q12800 502 aa15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 LMBR1LQ6UX01 489 aa15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 DHX37Q8IY37 1157 aaKnown RBP15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 NCOA7Q8NI08 942 aa15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 SLC26A6Q9BXS9 759 aa15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 LRRIQ1Q96JM4 1722 aa15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 RAD21O60216 631 aa15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 LRRC8AQ8IWT6 810 aa15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 KCNH5Q8NCM2 988 aa15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 ZSWIM6Q9HCJ5 1215 aa15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 STAP2Q9UGK3 403 aa15.13■□□□□ 0.01
TRAPPC9-201ENST00000389328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.12■□□□□ 0.01
TRAPPC9-201ENST00000389328 IBSPP21815 317 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC9-201ENST00000389328 STIM1Q13586 685 aa15.12■□□□□ 0.01
TRAPPC9-201ENST00000389328 KIF6Q6ZMV9 814 aa15.12■□□□□ 0.01
TRAPPC9-201ENST00000389328 VPS18Q9P253 973 aa15.12■□□□□ 0.01
TRAPPC9-201ENST00000389328 HSP90AB3PQ58FF7 597 aa15.12■□□□□ 0.01
TRAPPC9-201ENST00000389328 NAPBQ9H115 298 aa15.12■□□□□ 0.01
TRAPPC9-201ENST00000389328 EDC4Q6P2E9 1401 aaKnown RBP15.12■□□□□ 0.01
TRAPPC9-201ENST00000389328 THEMISQ8N1K5 641 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC9-201ENST00000389328 LRRC59Q96AG4 307 aaKnown RBP15.12■□□□□ 0.01
TRAPPC9-201ENST00000389328 CEP131Q9UPN4 1083 aa15.12■□□□□ 0.01
TRAPPC9-201ENST00000389328 ATP7AQ04656 1500 aa15.12■□□□□ 0.01
TRAPPC9-201ENST00000389328 CLASP1Q7Z460 1538 aa15.12■□□□□ 0.01
TRAPPC9-201ENST00000389328 SSRP1Q08945 709 aaKnown RBP15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 KRBA2Q6ZNG9 492 aa15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 XPO4Q9C0E2 1151 aaKnown RBP15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 PHF8Q9UPP1 1060 aa15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 ASXL2Q76L83 1435 aa15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 RXRAP19793 462 aa15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 AFMP43652 599 aa15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 NAA30Q147X3 362 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 FAM135BQ49AJ0 1406 aa15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 GOLGA1Q92805 767 aa15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 MAP3K5Q99683 1374 aa15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 PRC1O43663 620 aa15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 CEP89Q96ST8 783 aa15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 TRPM2O94759 1503 aa15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 A0A0D9SFI3 127 aa15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 TUBB4AP04350 444 aa15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 FANCCQ00597 558 aa15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 POLR1AO95602 1720 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC9-201ENST00000389328 PTCH1Q13635 1447 aa15.1■□□□□ 0.01
TRAPPC9-201ENST00000389328 MINDY4BA8MYZ0 360 aa15.1■□□□□ 0.01
TRAPPC9-201ENST00000389328 RHOXF2BP0C7M4 288 aa15.1■□□□□ 0.01
TRAPPC9-201ENST00000389328 MAP9Q49MG5 647 aa15.1■□□□□ 0.01
TRAPPC9-201ENST00000389328 TMEM67Q5HYA8 995 aa15.1■□□□□ 0.01
TRAPPC9-201ENST00000389328 RHOXF2Q9BQY4 288 aa15.1■□□□□ 0.01
TRAPPC9-201ENST00000389328 AKAP2Q9Y2D5 859 aa15.1■□□□□ 0.01
TRAPPC9-201ENST00000389328 CEBPAP49715 358 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC9-201ENST00000389328 DNA2P51530 1060 aa15.1■□□□□ 0.01
TRAPPC9-201ENST00000389328 LGR6Q9HBX8 967 aa15.1■□□□□ 0.01
TRAPPC9-201ENST00000389328 N4BP3O15049 544 aa15.1■□□□□ 0.01
TRAPPC9-201ENST00000389328 PAG1Q9NWQ8 432 aa15.1■□□□□ 0.01
TRAPPC9-201ENST00000389328 POTEB2H3BUK9 544 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 STX17P56962 302 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 MYL5Q02045 173 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 USP28Q96RU2 1077 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 EPS15P42566 896 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 TANGO6Q9C0B7 1094 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 TTC21AQ8NDW8 1320 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 CCDC175P0C221 793 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 CDR1P51861 262 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 CTR9Q6PD62 1173 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 DBNDD2Q9BQY9 259 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 PLXNC1O60486 1568 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 CTAGE15A4D2H0 777 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 CTAGE8P0CG41 777 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 PPP2R3AQ06190 1150 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 CTAGE6Q86UF2 777 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 CTAGE4Q8IX94 777 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 AMOTL1Q8IY63 956 aa15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 BAG1Q99933 345 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC9-201ENST00000389328 SHTN1A0MZ66 631 aa15.08■□□□□ 0
TRAPPC9-201ENST00000389328 IQCEQ6IPM2 695 aa15.08■□□□□ 0
TRAPPC9-201ENST00000389328 GPATCH11Q8N954 259 aa15.08■□□□□ 0
TRAPPC9-201ENST00000389328 EAF2Q96CJ1 260 aaPredicted RBP15.08■□□□□ 0
TRAPPC9-201ENST00000389328 LRP2BPQ9P2M1 347 aa15.08■□□□□ 0
TRAPPC9-201ENST00000389328 ABCF2Q9UG63 623 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms