RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 VIL1P09327 827 aaKnown RBP27.93■■■□□ 2.06
CNEP1R1-201ENST00000389134 CTU1Q7Z7A3 348 aaKnown RBP27.93■■■□□ 2.06
CNEP1R1-201ENST00000389134 PLBD2Q8NHP8 589 aa27.93■■■□□ 2.06
CNEP1R1-201ENST00000389134 FAM89AQ96GI7 184 aa27.93■■■□□ 2.06
CNEP1R1-201ENST00000389134 GGA3Q9NZ52 723 aa27.93■■■□□ 2.06
CNEP1R1-201ENST00000389134 TBC1D16Q8TBP0 767 aa27.92■■■□□ 2.06
CNEP1R1-201ENST00000389134 ISCA1Q9BUE6 129 aa27.92■■■□□ 2.06
CNEP1R1-201ENST00000389134 ZC3H12CQ9C0D7 883 aaKnown RBP27.92■■■□□ 2.06
CNEP1R1-201ENST00000389134 PSME4Q14997 1843 aa27.92■■■□□ 2.06
CNEP1R1-201ENST00000389134 ANKRD13DQ6ZTN6 518 aa27.91■■■□□ 2.06
CNEP1R1-201ENST00000389134 ZNF428Q96B54 188 aa27.91■■■□□ 2.06
CNEP1R1-201ENST00000389134 CDCA5Q96FF9 252 aa27.91■■■□□ 2.06
CNEP1R1-201ENST00000389134 TMPOP42166 694 aaKnown RBP27.9■■■□□ 2.06
CNEP1R1-201ENST00000389134 RPS8P62241 208 aaKnown RBP27.9■■■□□ 2.06
CNEP1R1-201ENST00000389134 CHPF2Q9P2E5 772 aa27.9■■■□□ 2.06
CNEP1R1-201ENST00000389134 G3V3G9 751 aa27.88■■■□□ 2.05
CNEP1R1-201ENST00000389134 FKBP1BP68106 108 aa27.88■■■□□ 2.05
CNEP1R1-201ENST00000389134 DCAF8Q5TAQ9 597 aa27.88■■■□□ 2.05
CNEP1R1-201ENST00000389134 PODXL2Q9NZ53 605 aa27.88■■■□□ 2.05
CNEP1R1-201ENST00000389134 COL4A1P02462 1669 aa27.87■■■□□ 2.05
CNEP1R1-201ENST00000389134 ATP5J2-PTCD1G3V325 749 aa27.87■■■□□ 2.05
CNEP1R1-201ENST00000389134 PRPF38BQ5VTL8 546 aaKnown RBP27.87■■■□□ 2.05
CNEP1R1-201ENST00000389134 RASAL3Q86YV0 1011 aa27.87■■■□□ 2.05
CNEP1R1-201ENST00000389134 PAPPA2Q9BXP8 1791 aa27.86■■■□□ 2.05
CNEP1R1-201ENST00000389134 CHL1O00533 1208 aa27.86■■■□□ 2.05
CNEP1R1-201ENST00000389134 IRS4O14654 1257 aaPredicted RBP27.86■■■□□ 2.05
CNEP1R1-201ENST00000389134 ZNF280AP59817 542 aaPredicted RBP27.86■■■□□ 2.05
CNEP1R1-201ENST00000389134 PKN2Q16513 984 aaKnown RBP27.86■■■□□ 2.05
CNEP1R1-201ENST00000389134 AGBL3Q8NEM8 1001 aa27.86■■■□□ 2.05
CNEP1R1-201ENST00000389134 ASTN2O75129 1339 aaPredicted RBP27.86■■■□□ 2.05
CNEP1R1-201ENST00000389134 ZNF609O15014 1411 aa27.85■■■□□ 2.05
CNEP1R1-201ENST00000389134 TRIM28Q13263 835 aaKnown RBP27.85■■■□□ 2.05
CNEP1R1-201ENST00000389134 SCARF1Q14162 830 aa27.85■■■□□ 2.05
CNEP1R1-201ENST00000389134 KRT24Q2M2I5 525 aa27.85■■■□□ 2.05
CNEP1R1-201ENST00000389134 HDGFL1Q5TGJ6 251 aa27.85■■■□□ 2.05
CNEP1R1-201ENST00000389134 DBF4Q9UBU7 674 aaPredicted RBP27.85■■■□□ 2.05
CNEP1R1-201ENST00000389134 HOXB7P09629 217 aa27.84■■■□□ 2.05
CNEP1R1-201ENST00000389134 RTL5Q5HYW3 569 aaPredicted RBP27.84■■■□□ 2.05
CNEP1R1-201ENST00000389134 ANGEL2Q5VTE6 544 aaKnown RBP27.84■■■□□ 2.05
CNEP1R1-201ENST00000389134 UFL1O94874 794 aa27.83■■■□□ 2.05
CNEP1R1-201ENST00000389134 HSP90B1P14625 803 aaKnown RBP27.83■■■□□ 2.05
CNEP1R1-201ENST00000389134 RSBN1LQ6PCB5 846 aaPredicted RBP27.83■■■□□ 2.05
CNEP1R1-201ENST00000389134 ANKIB1Q9P2G1 1089 aa27.83■■■□□ 2.05
CNEP1R1-201ENST00000389134 GGA1Q9UJY5 639 aa27.83■■■□□ 2.05
CNEP1R1-201ENST00000389134 HPS5Q9UPZ3 1129 aa27.83■■■□□ 2.05
CNEP1R1-201ENST00000389134 HYPKQ9NX55 129 aa27.82■■■□□ 2.04
CNEP1R1-201ENST00000389134 PITPNM2Q9BZ72 1349 aa27.82■■■□□ 2.04
CNEP1R1-201ENST00000389134 HDAC9Q9UKV0 1011 aa27.81■■■□□ 2.04
CNEP1R1-201ENST00000389134 LAS1LQ9Y4W2 734 aaKnown RBP27.81■■■□□ 2.04
CNEP1R1-201ENST00000389134 ZBTB38Q8NAP3 1195 aaPredicted RBP27.79■■■□□ 2.04
CNEP1R1-201ENST00000389134 MYOZ2Q9NPC6 264 aa27.79■■■□□ 2.04
CNEP1R1-201ENST00000389134 USP17L8P0C7I0 530 aa27.78■■■□□ 2.04
CNEP1R1-201ENST00000389134 NEUROD2Q15784 382 aa27.78■■■□□ 2.04
CNEP1R1-201ENST00000389134 SEC31BQ9NQW1 1179 aa27.78■■■□□ 2.04
CNEP1R1-201ENST00000389134 ZNF296Q8WUU4 475 aaPredicted RBP27.77■■■□□ 2.04
CNEP1R1-201ENST00000389134 GMLQ99445 158 aa27.77■■■□□ 2.04
CNEP1R1-201ENST00000389134 CCDC152Q4G0S7 254 aa27.76■■■□□ 2.03
CNEP1R1-201ENST00000389134 TBC1D8O95759 1140 aa27.75■■■□□ 2.03
CNEP1R1-201ENST00000389134 NOM1Q5C9Z4 860 aaKnown RBP27.75■■■□□ 2.03
CNEP1R1-201ENST00000389134 PODNQ7Z5L7 613 aa27.75■■■□□ 2.03
CNEP1R1-201ENST00000389134 USP17L3A6NCW0 530 aa27.74■■■□□ 2.03
CNEP1R1-201ENST00000389134 USP17L4A6NCW7 530 aa27.74■■■□□ 2.03
CNEP1R1-201ENST00000389134 USP17L1Q7RTZ2 530 aa27.74■■■□□ 2.03
CNEP1R1-201ENST00000389134 RIC3Q7Z5B4 369 aa27.74■■■□□ 2.03
CNEP1R1-201ENST00000389134 TRIM35Q9UPQ4 493 aa27.74■■■□□ 2.03
CNEP1R1-201ENST00000389134 XDHP47989 1333 aa27.73■■■□□ 2.03
CNEP1R1-201ENST00000389134 UBE2Q2LH0YL09 131 aa27.73■■■□□ 2.03
CNEP1R1-201ENST00000389134 TM4SF4P48230 202 aa27.73■■■□□ 2.03
CNEP1R1-201ENST00000389134 MOB2Q70IA6 237 aa27.73■■■□□ 2.03
CNEP1R1-201ENST00000389134 ATP2B4P23634 1241 aa27.72■■■□□ 2.03
CNEP1R1-201ENST00000389134 GOLGA2Q08379 1002 aa27.72■■■□□ 2.03
CNEP1R1-201ENST00000389134 RALBP1Q15311 655 aa27.72■■■□□ 2.03
CNEP1R1-201ENST00000389134 DUSP27Q5VZP5 1158 aa27.72■■■□□ 2.03
CNEP1R1-201ENST00000389134 PDE8AO60658 829 aa27.71■■■□□ 2.03
CNEP1R1-201ENST00000389134 GPR25O00155 361 aa27.7■■■□□ 2.02
CNEP1R1-201ENST00000389134 PCCAP05165 728 aaPredicted RBP27.7■■■□□ 2.02
CNEP1R1-201ENST00000389134 TTLL12Q14166 644 aaPredicted RBP27.7■■■□□ 2.02
CNEP1R1-201ENST00000389134 FBXO46Q6PJ61 603 aaPredicted RBP27.7■■■□□ 2.02
CNEP1R1-201ENST00000389134 ANKRD18AQ8IVF6 992 aa27.7■■■□□ 2.02
CNEP1R1-201ENST00000389134 CCDC146Q8IYE0 955 aa27.7■■■□□ 2.02
CNEP1R1-201ENST00000389134 CCDC191Q8NCU4 936 aa27.7■■■□□ 2.02
CNEP1R1-201ENST00000389134 MYH3P11055 1940 aa27.7■■■□□ 2.02
CNEP1R1-201ENST00000389134 NF2P35240 595 aa27.69■■■□□ 2.02
CNEP1R1-201ENST00000389134 SCAF8Q9UPN6 1271 aaKnown RBP27.69■■■□□ 2.02
CNEP1R1-201ENST00000389134 NBPF9Q3BBW0 867 aa27.68■■■□□ 2.02
CNEP1R1-201ENST00000389134 PRAMEF18Q5VWM3 479 aa27.68■■■□□ 2.02
CNEP1R1-201ENST00000389134 RUNDC1Q96C34 613 aa27.68■■■□□ 2.02
CNEP1R1-201ENST00000389134 KIAA0100Q14667 2235 aaKnown RBP27.67■■■□□ 2.02
CNEP1R1-201ENST00000389134 SREBF2Q12772 1141 aa27.67■■■□□ 2.02
CNEP1R1-201ENST00000389134 OGFOD1Q8N543 542 aa27.67■■■□□ 2.02
CNEP1R1-201ENST00000389134 MYD88Q99836 296 aa27.67■■■□□ 2.02
CNEP1R1-201ENST00000389134 CCDC85AQ96PX6 553 aaPredicted RBP27.66■■■□□ 2.02
CNEP1R1-201ENST00000389134 CFHR5Q9BXR6 569 aa27.66■■■□□ 2.02
CNEP1R1-201ENST00000389134 CWC25Q9NXE8 425 aaPredicted RBP27.66■■■□□ 2.02
CNEP1R1-201ENST00000389134 ZNF646O15015 1829 aaPredicted RBP27.66■■■□□ 2.02
CNEP1R1-201ENST00000389134 SPEF2Q9C093 1822 aa27.65■■■□□ 2.02
CNEP1R1-201ENST00000389134 MMP14P50281 582 aa27.65■■■□□ 2.02
CNEP1R1-201ENST00000389134 GCC1Q96CN9 775 aa27.65■■■□□ 2.02
CNEP1R1-201ENST00000389134 WNT10BO00744 389 aa27.64■■■□□ 2.02
CNEP1R1-201ENST00000389134 FKTNO75072 461 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms