RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 WTAPQ15007 396 aa17.67■□□□□ 0.42
ALK-201ENST00000389048 CCDC114Q96M63 670 aa17.67■□□□□ 0.42
ALK-201ENST00000389048 NSRP1Q9H0G5 558 aaKnown RBP17.67■□□□□ 0.42
ALK-201ENST00000389048 KIAA1107Q9UPP5 1409 aa17.67■□□□□ 0.42
ALK-201ENST00000389048 C10orf67Q8IYJ2 551 aa17.67■□□□□ 0.42
ALK-201ENST00000389048 GTF3C6Q969F1 213 aa17.67■□□□□ 0.42
ALK-201ENST00000389048 ECHDC1Q9NTX5 307 aa17.67■□□□□ 0.42
ALK-201ENST00000389048 SLC4A4Q9Y6R1 1079 aa17.67■□□□□ 0.42
ALK-201ENST00000389048 CCDC121Q6ZUS5 278 aa17.66■□□□□ 0.42
ALK-201ENST00000389048 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.66■□□□□ 0.42
ALK-201ENST00000389048 C9orf84Q5VXU9 1444 aa17.66■□□□□ 0.42
ALK-201ENST00000389048 FERMT1Q9BQL6 677 aa17.66■□□□□ 0.42
ALK-201ENST00000389048 DACT1Q9NYF0 836 aa17.66■□□□□ 0.42
ALK-201ENST00000389048 ATP2B3Q16720 1220 aa17.66■□□□□ 0.42
ALK-201ENST00000389048 ZNF569Q5MCW4 686 aa17.66■□□□□ 0.42
ALK-201ENST00000389048 STXBP4Q6ZWJ1 553 aa17.66■□□□□ 0.42
ALK-201ENST00000389048 SELENOOQ9BVL4 669 aa17.66■□□□□ 0.42
ALK-201ENST00000389048 CFAP57Q96MR6 1250 aa17.66■□□□□ 0.42
ALK-201ENST00000389048 CTAGE9A4FU28 777 aa17.65■□□□□ 0.42
ALK-201ENST00000389048 CCDC171Q6TFL3 1326 aa17.65■□□□□ 0.42
ALK-201ENST00000389048 SYT10Q6XYQ8 523 aa17.65■□□□□ 0.42
ALK-201ENST00000389048 RASAL2Q9UJF2 1139 aa17.65■□□□□ 0.42
ALK-201ENST00000389048 GOLGA6L9A6NEM1 432 aa17.65■□□□□ 0.42
ALK-201ENST00000389048 UBXN1Q04323 297 aa17.65■□□□□ 0.42
ALK-201ENST00000389048 IFI16Q16666 785 aaKnown RBP17.65■□□□□ 0.42
ALK-201ENST00000389048 CABP5Q9NP86 173 aa17.65■□□□□ 0.42
ALK-201ENST00000389048 NAIPQ13075 1403 aa17.65■□□□□ 0.42
ALK-201ENST00000389048 UBLCP1Q8WVY7 318 aaPredicted RBP17.65■□□□□ 0.42
ALK-201ENST00000389048 SEC62Q99442 399 aaKnown RBP17.65■□□□□ 0.42
ALK-201ENST00000389048 CCDC129Q6ZRS4 1044 aa17.65■□□□□ 0.42
ALK-201ENST00000389048 PI4KAP2A4QPH2 592 aa17.65■□□□□ 0.42
ALK-201ENST00000389048 PDIA4P13667 645 aaKnown RBP17.65■□□□□ 0.42
ALK-201ENST00000389048 CYLC1P35663 651 aaPredicted RBP17.65■□□□□ 0.42
ALK-201ENST00000389048 PI4KAP1Q8N8J0 262 aa17.65■□□□□ 0.42
ALK-201ENST00000389048 MAP7D1Q3KQU3 841 aa17.64■□□□□ 0.41
ALK-201ENST00000389048 ALDH1L2Q3SY69 923 aa17.64■□□□□ 0.41
ALK-201ENST00000389048 ANKLE2Q86XL3 938 aa17.64■□□□□ 0.41
ALK-201ENST00000389048 PKD2L1Q9P0L9 805 aa17.64■□□□□ 0.41
ALK-201ENST00000389048 MCM7P33993 719 aa17.64■□□□□ 0.41
ALK-201ENST00000389048 SH3BP5O60239 455 aa17.64■□□□□ 0.41
ALK-201ENST00000389048 CYP7A1P22680 504 aa17.63■□□□□ 0.41
ALK-201ENST00000389048 SREK1Q8WXA9 508 aaKnown RBP17.63■□□□□ 0.41
ALK-201ENST00000389048 IGF1RP08069 1367 aa17.63■□□□□ 0.41
ALK-201ENST00000389048 TTC21AQ8NDW8 1320 aa17.63■□□□□ 0.41
ALK-201ENST00000389048 KANK3Q6NY19 840 aa17.63■□□□□ 0.41
ALK-201ENST00000389048 UIMC1Q96RL1 719 aa17.63■□□□□ 0.41
ALK-201ENST00000389048 CWC25Q9NXE8 425 aaPredicted RBP17.63■□□□□ 0.41
ALK-201ENST00000389048 SDSP20132 328 aa17.63■□□□□ 0.41
ALK-201ENST00000389048 PRIM1P49642 420 aaKnown RBP17.63■□□□□ 0.41
ALK-201ENST00000389048 CCDC65Q8IXS2 484 aa17.63■□□□□ 0.41
ALK-201ENST00000389048 SMC6Q96SB8 1091 aa17.63■□□□□ 0.41
ALK-201ENST00000389048 MCM5P33992 734 aa17.63■□□□□ 0.41
ALK-201ENST00000389048 MAP3K9P80192 1104 aa17.63■□□□□ 0.41
ALK-201ENST00000389048 DTNBO60941 627 aa17.62■□□□□ 0.41
ALK-201ENST00000389048 ANKS4BQ8N8V4 417 aa17.62■□□□□ 0.41
ALK-201ENST00000389048 EHBP1Q8NDI1 1231 aa17.62■□□□□ 0.41
ALK-201ENST00000389048 ACSBG1Q96GR2 724 aa17.62■□□□□ 0.41
ALK-201ENST00000389048 MBIPQ9NS73 344 aa17.62■□□□□ 0.41
ALK-201ENST00000389048 VGLL3A8MV65 326 aa17.62■□□□□ 0.41
ALK-201ENST00000389048 ZBTB43O43298 467 aa17.62■□□□□ 0.41
ALK-201ENST00000389048 FOXO3O43524 673 aa17.62■□□□□ 0.41
ALK-201ENST00000389048 RMND1Q9NWS8 449 aa17.62■□□□□ 0.41
ALK-201ENST00000389048 TTC31Q49AM3 519 aaPredicted RBP17.62■□□□□ 0.41
ALK-201ENST00000389048 CPLX4Q7Z7G2 160 aa17.62■□□□□ 0.41
ALK-201ENST00000389048 NAPAP54920 295 aa17.62■□□□□ 0.41
ALK-201ENST00000389048 RASA3Q14644 834 aa17.62■□□□□ 0.41
ALK-201ENST00000389048 GOLGA1Q92805 767 aa17.62■□□□□ 0.41
ALK-201ENST00000389048 RTL1A6NKG5 1358 aa17.62■□□□□ 0.41
ALK-201ENST00000389048 HPDP32754 393 aaPredicted RBP17.62■□□□□ 0.41
ALK-201ENST00000389048 TCHPQ9BT92 498 aa17.62■□□□□ 0.41
ALK-201ENST00000389048 HLA-DOAP06340 250 aa17.61■□□□□ 0.41
ALK-201ENST00000389048 PPP1R7Q15435 360 aa17.61■□□□□ 0.41
ALK-201ENST00000389048 RTN1Q16799 776 aa17.61■□□□□ 0.41
ALK-201ENST00000389048 SEPT14Q6ZU15 432 aa17.61■□□□□ 0.41
ALK-201ENST00000389048 SLF2Q8IX21 1173 aa17.61■□□□□ 0.41
ALK-201ENST00000389048 UTP14AQ9BVJ6 771 aaKnown RBP17.61■□□□□ 0.41
ALK-201ENST00000389048 FAM13AO94988 1023 aa17.61■□□□□ 0.41
ALK-201ENST00000389048 RAPGEF1Q13905 1077 aa17.61■□□□□ 0.41
ALK-201ENST00000389048 PPP1R21Q6ZMI0 780 aa17.61■□□□□ 0.41
ALK-201ENST00000389048 PRIMPOLQ96LW4 560 aa17.61■□□□□ 0.41
ALK-201ENST00000389048 TACC1O75410 805 aa17.61■□□□□ 0.41
ALK-201ENST00000389048 DCAF17Q5H9S7 520 aaPredicted RBP17.61■□□□□ 0.41
ALK-201ENST00000389048 ANAPC4Q9UJX5 808 aa17.61■□□□□ 0.41
ALK-201ENST00000389048 RBM8AQ9Y5S9 174 aaKnown RBP17.61■□□□□ 0.41
ALK-201ENST00000389048 DBF4Q9UBU7 674 aaPredicted RBP17.6■□□□□ 0.41
ALK-201ENST00000389048 XRCC6P12956 609 aaKnown RBP eCLIP17.6■□□□□ 0.41
ALK-201ENST00000389048 KLHL40Q2TBA0 621 aa17.6■□□□□ 0.41
ALK-201ENST00000389048 ZKSCAN3Q9BRR0 538 aa17.6■□□□□ 0.41
ALK-201ENST00000389048 ATAD2Q6PL18 1390 aa17.6■□□□□ 0.41
ALK-201ENST00000389048 OPA1O60313 960 aa17.6■□□□□ 0.41
ALK-201ENST00000389048 BAG3O95817 575 aa17.6■□□□□ 0.41
ALK-201ENST00000389048 CCT6AP40227 531 aaKnown RBP17.6■□□□□ 0.41
ALK-201ENST00000389048 ERCC3P19447 782 aa17.6■□□□□ 0.41
ALK-201ENST00000389048 MIGA1Q8NAN2 632 aa17.6■□□□□ 0.41
ALK-201ENST00000389048 IFNKQ9P0W0 207 aa17.6■□□□□ 0.41
ALK-201ENST00000389048 PA2G4Q9UQ80 394 aaKnown RBP17.6■□□□□ 0.41
ALK-201ENST00000389048 UVSSAQ2YD98 709 aa17.6■□□□□ 0.41
ALK-201ENST00000389048 RBM26Q5T8P6 1007 aaKnown RBP17.6■□□□□ 0.41
ALK-201ENST00000389048 RPUSD2Q8IZ73 545 aaKnown RBP17.6■□□□□ 0.41
ALK-201ENST00000389048 CRNKL1Q9BZJ0 848 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms