RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 LARP6Q9BRS8 491 aaKnown RBP14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 NPHP3Q7Z494 1330 aa14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 USP37Q86T82 979 aa14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 KCNG4Q8TDN1 519 aa14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 SMARCC1Q92922 1105 aaPredicted RBP14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 TRMT1Q9NXH9 659 aaKnown RBP14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 TRPM2O94759 1503 aa14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 CEP112Q8N8E3 955 aa14.07□□□□□ -0.16
KCNQ3-201ENST00000388996 PANK2Q9BZ23 570 aa14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 ADCY5O95622 1261 aa14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 RBM25P49756 843 aaKnown RBP14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 SNW1Q13573 536 aaKnown RBP14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 PRC1O43663 620 aa14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 ARHGAP45Q92619 1136 aa14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 N4BP3O15049 544 aa14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 PLCG2P16885 1265 aa14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 NPATQ14207 1427 aa14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 HDAC1Q13547 482 aaPredicted RBP14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 MAP3K5Q99683 1374 aa14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 KLF18A0A0U1RQI7 1052 aa14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 ACTN2P35609 894 aa14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 ALDH1L1O75891 902 aa14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 TBC1D32Q96NH3 1257 aa14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 IFI16Q16666 785 aaKnown RBP14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 MAATS1Q7Z4T9 603 aa14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 ABCC10Q5T3U5 1492 aa14.06□□□□□ -0.16
KCNQ3-201ENST00000388996 UTP14AQ9BVJ6 771 aaKnown RBP14.05□□□□□ -0.16
KCNQ3-201ENST00000388996 FLT4P35916 1363 aa14.05□□□□□ -0.16
KCNQ3-201ENST00000388996 PLVAPQ9BX97 442 aa14.05□□□□□ -0.16
KCNQ3-201ENST00000388996 CYP7A1P22680 504 aa14.05□□□□□ -0.16
KCNQ3-201ENST00000388996 JADE2Q9NQC1 790 aa14.05□□□□□ -0.16
KCNQ3-201ENST00000388996 NUP153P49790 1475 aaKnown RBP14.05□□□□□ -0.16
KCNQ3-201ENST00000388996 GDPD2Q9HCC8 539 aa14.05□□□□□ -0.16
KCNQ3-201ENST00000388996 BCCIPQ9P287 314 aaKnown RBP eCLIP14.05□□□□□ -0.16
KCNQ3-201ENST00000388996 AKR1B10O60218 316 aa14.05□□□□□ -0.16
KCNQ3-201ENST00000388996 TRAF1Q13077 416 aa14.05□□□□□ -0.16
KCNQ3-201ENST00000388996 GNAQP50148 359 aa14.05□□□□□ -0.16
KCNQ3-201ENST00000388996 ASIC1P78348 528 aa14.05□□□□□ -0.16
KCNQ3-201ENST00000388996 MICALCLQ6ZW33 695 aa14.05□□□□□ -0.16
KCNQ3-201ENST00000388996 CTAGE1Q96RT6 745 aa14.05□□□□□ -0.16
KCNQ3-201ENST00000388996 RASAL2Q9UJF2 1139 aa14.05□□□□□ -0.16
KCNQ3-201ENST00000388996 TFIP11Q9UBB9 837 aaKnown RBP14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 PPFIA3O75145 1194 aa14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 DDX12PQ92771 950 aa14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 FAM107BQ9H098 131 aa14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 HDAC9Q9UKV0 1011 aa14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 NBPF7P0C2Y1 421 aaPredicted RBP14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 SLC4A4Q9Y6R1 1079 aa14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 MAPKBP1O60336 1514 aa14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 GRM8O00222 908 aa14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 ANXA1P04083 346 aa14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 NAA16Q6N069 864 aaPredicted RBP14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 JARID2Q92833 1246 aaPredicted RBP14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 TSNARE1Q96NA8 513 aa14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 TMX1Q9H3N1 280 aa14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 B4DLN1 442 aa14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 MRPL12P52815 198 aaKnown RBP14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 NAPAP54920 295 aa14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 RHPN1Q8TCX5 695 aa14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 SREK1Q8WXA9 508 aaKnown RBP14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 PABPN1LA6NDY0 278 aaKnown RBP14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 TRMT1LQ7Z2T5 733 aaKnown RBP14.04□□□□□ -0.16
KCNQ3-201ENST00000388996 TTC12Q9H892 705 aaPredicted RBP14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 RRAGBQ5VZM2 374 aa14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 KRT13P13646 458 aa14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 PAG1Q9NWQ8 432 aa14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 TMTC2Q8N394 836 aa14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 ZSCAN22P10073 491 aaPredicted RBP14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 SDSP20132 328 aa14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 RBM27Q9P2N5 1060 aaKnown RBP14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 ATP7AQ04656 1500 aa14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 IL15P40933 162 aaPredicted RBP14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 OGFOD1Q8N543 542 aa14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 GNAT2P19087 354 aa14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 CEP63Q96MT8 703 aa14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 NYXQ9GZU5 481 aa14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 TMCO5BA8MYB1 307 aa14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 RNF187Q5TA31 235 aaPredicted RBP14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 SKAP1Q86WV1 359 aa14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 LRRC2Q9BYS8 371 aa14.03□□□□□ -0.16
KCNQ3-201ENST00000388996 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.02□□□□□ -0.16
KCNQ3-201ENST00000388996 MAPK8IP2Q13387 824 aaPredicted RBP14.02□□□□□ -0.16
KCNQ3-201ENST00000388996 PLS1Q14651 629 aa14.02□□□□□ -0.16
KCNQ3-201ENST00000388996 CCDC171Q6TFL3 1326 aa14.02□□□□□ -0.16
KCNQ3-201ENST00000388996 PLCH2O75038 1416 aa14.02□□□□□ -0.16
KCNQ3-201ENST00000388996 PPP1R14CQ8TAE6 165 aa14.02□□□□□ -0.17
KCNQ3-201ENST00000388996 MCMDC2Q4G0Z9 681 aa14.02□□□□□ -0.17
KCNQ3-201ENST00000388996 SPECC1Q5M775 1068 aa14.02□□□□□ -0.17
KCNQ3-201ENST00000388996 ZCRB1Q8TBF4 217 aaKnown RBP14.02□□□□□ -0.17
KCNQ3-201ENST00000388996 MRPS27Q92552 414 aaKnown RBP14.02□□□□□ -0.17
KCNQ3-201ENST00000388996 CKAP4Q07065 602 aaKnown RBP14.02□□□□□ -0.17
KCNQ3-201ENST00000388996 BRF1Q92994 677 aa14.02□□□□□ -0.17
KCNQ3-201ENST00000388996 ALG1Q9BT22 464 aa14.02□□□□□ -0.17
KCNQ3-201ENST00000388996 CNPY2Q9Y2B0 182 aa14.02□□□□□ -0.17
KCNQ3-201ENST00000388996 ZSCAN23Q3MJ62 389 aa14.01□□□□□ -0.17
KCNQ3-201ENST00000388996 C8orf37Q96NL8 207 aa14.01□□□□□ -0.17
KCNQ3-201ENST00000388996 KSR2Q6VAB6 950 aa14.01□□□□□ -0.17
KCNQ3-201ENST00000388996 IQSEC3Q9UPP2 1182 aaPredicted RBP14.01□□□□□ -0.17
KCNQ3-201ENST00000388996 PSMD1Q99460 953 aa14.01□□□□□ -0.17
KCNQ3-201ENST00000388996 C6orf50Q9HD87 102 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms