RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 GSTT1P30711 240 aa8.6□□□□□ -1.03
RNU6-40P-201ENST00000384254 VEGFBP49765 207 aa8.6□□□□□ -1.03
RNU6-40P-201ENST00000384254 NXPE4Q6UWF7 544 aa8.6□□□□□ -1.03
RNU6-40P-201ENST00000384254 DHX32Q7L7V1 743 aaKnown RBP8.6□□□□□ -1.03
RNU6-40P-201ENST00000384254 SLC30A3Q99726 388 aa8.6□□□□□ -1.03
RNU6-40P-201ENST00000384254 OSBPL7Q9BZF2 842 aa8.6□□□□□ -1.03
RNU6-40P-201ENST00000384254 PPFIA3O75145 1194 aa8.59□□□□□ -1.03
RNU6-40P-201ENST00000384254 FANCCQ00597 558 aa8.59□□□□□ -1.03
RNU6-40P-201ENST00000384254 GRM2Q14416 872 aa8.59□□□□□ -1.03
RNU6-40P-201ENST00000384254 PCSK7Q16549 785 aa8.59□□□□□ -1.03
RNU6-40P-201ENST00000384254 KIAA0319Q5VV43 1072 aa8.59□□□□□ -1.03
RNU6-40P-201ENST00000384254 C9orf131Q5VYM1 1079 aa8.59□□□□□ -1.03
RNU6-40P-201ENST00000384254 RBSNQ9H1K0 784 aa8.59□□□□□ -1.03
RNU6-40P-201ENST00000384254 A0A1W2PP55 124 aa8.58□□□□□ -1.04
RNU6-40P-201ENST00000384254 BMP4P12644 408 aa8.58□□□□□ -1.04
RNU6-40P-201ENST00000384254 TBC1D8BQ0IIM8 1120 aa8.58□□□□□ -1.04
RNU6-40P-201ENST00000384254 GRIN2CQ14957 1233 aa8.58□□□□□ -1.04
RNU6-40P-201ENST00000384254 TAF1CQ15572 869 aaPredicted RBP8.58□□□□□ -1.04
RNU6-40P-201ENST00000384254 NT5DC4Q86YG4 428 aa8.58□□□□□ -1.04
RNU6-40P-201ENST00000384254 VWA5B2Q8N398 1253 aa8.58□□□□□ -1.04
RNU6-40P-201ENST00000384254 C8orf37Q96NL8 207 aa8.58□□□□□ -1.04
RNU6-40P-201ENST00000384254 NSUN5Q96P11 429 aaKnown RBP8.58□□□□□ -1.04
RNU6-40P-201ENST00000384254 IGFLR1Q9H665 355 aa8.58□□□□□ -1.04
RNU6-40P-201ENST00000384254 CCSER2Q9H7U1 834 aa8.58□□□□□ -1.04
RNU6-40P-201ENST00000384254 LIN7BQ9HAP6 207 aa8.58□□□□□ -1.04
RNU6-40P-201ENST00000384254 USP35Q9P2H5 1018 aa8.58□□□□□ -1.04
RNU6-40P-201ENST00000384254 SALL4Q9UJQ4 1053 aa8.58□□□□□ -1.04
RNU6-40P-201ENST00000384254 GPR25O00155 361 aa8.57□□□□□ -1.04
RNU6-40P-201ENST00000384254 CTSHP09668 335 aa8.57□□□□□ -1.04
RNU6-40P-201ENST00000384254 NRLP54845 237 aa8.57□□□□□ -1.04
RNU6-40P-201ENST00000384254 LDLRAD1Q5T700 205 aa8.57□□□□□ -1.04
RNU6-40P-201ENST00000384254 HS2ST1Q7LGA3 356 aa8.57□□□□□ -1.04
RNU6-40P-201ENST00000384254 UBE2OQ9C0C9 1292 aaKnown RBP8.57□□□□□ -1.04
RNU6-40P-201ENST00000384254 LATS2Q9NRM7 1088 aa8.57□□□□□ -1.04
RNU6-40P-201ENST00000384254 KIF4AO95239 1232 aa8.56□□□□□ -1.04
RNU6-40P-201ENST00000384254 GHRHP01286 108 aa8.56□□□□□ -1.04
RNU6-40P-201ENST00000384254 XRCC5P13010 732 aaKnown RBP8.56□□□□□ -1.04
RNU6-40P-201ENST00000384254 HOXD8P13378 290 aaPredicted RBP8.56□□□□□ -1.04
RNU6-40P-201ENST00000384254 ST13P50502 369 aaKnown RBP8.56□□□□□ -1.04
RNU6-40P-201ENST00000384254 DTHD1Q6ZMT9 781 aa8.56□□□□□ -1.04
RNU6-40P-201ENST00000384254 OSMRQ99650 979 aa8.56□□□□□ -1.04
RNU6-40P-201ENST00000384254 ZFYVE1Q9HBF4 777 aa8.56□□□□□ -1.04
RNU6-40P-201ENST00000384254 TTF2Q9UNY4 1162 aaKnown RBP8.56□□□□□ -1.04
RNU6-40P-201ENST00000384254 NSFL1CQ9UNZ2 370 aaKnown RBP8.56□□□□□ -1.04
RNU6-40P-201ENST00000384254 FCGRTP55899 365 aa8.55□□□□□ -1.04
RNU6-40P-201ENST00000384254 CTBSQ01459 385 aa8.55□□□□□ -1.04
RNU6-40P-201ENST00000384254 PRPF40BQ6NWY9 871 aaKnown RBP8.55□□□□□ -1.04
RNU6-40P-201ENST00000384254 SYT9Q86SS6 491 aa8.55□□□□□ -1.04
RNU6-40P-201ENST00000384254 USP31Q70CQ4 1352 aa8.55□□□□□ -1.04
RNU6-40P-201ENST00000384254 MX2P20592 715 aa8.54□□□□□ -1.04
RNU6-40P-201ENST00000384254 GPLD1P80108 840 aa8.54□□□□□ -1.04
RNU6-40P-201ENST00000384254 ZNF468Q5VIY5 522 aaPredicted RBP8.54□□□□□ -1.04
RNU6-40P-201ENST00000384254 PEAR1Q5VY43 1037 aaPredicted RBP8.54□□□□□ -1.04
RNU6-40P-201ENST00000384254 NANOS1Q8WY41 292 aaKnown RBP8.54□□□□□ -1.04
RNU6-40P-201ENST00000384254 ZKSCAN3Q9BRR0 538 aa8.54□□□□□ -1.04
RNU6-40P-201ENST00000384254 OXCT2Q9BYC2 517 aaPredicted RBP8.54□□□□□ -1.04
RNU6-40P-201ENST00000384254 TGIF2Q9GZN2 237 aa8.54□□□□□ -1.04
RNU6-40P-201ENST00000384254 GGT7Q9UJ14 662 aa8.54□□□□□ -1.04
RNU6-40P-201ENST00000384254 LOC102724428A0A0B4J2F2 783 aa8.53□□□□□ -1.04
RNU6-40P-201ENST00000384254 SIK1P57059 783 aa8.53□□□□□ -1.04
RNU6-40P-201ENST00000384254 MLLT1Q03111 559 aaPredicted RBP8.53□□□□□ -1.04
RNU6-40P-201ENST00000384254 GNL2Q13823 731 aaKnown RBP8.53□□□□□ -1.04
RNU6-40P-201ENST00000384254 NAALADL2Q58DX5 795 aa8.53□□□□□ -1.04
RNU6-40P-201ENST00000384254 MEI1Q5TIA1 1274 aa8.53□□□□□ -1.04
RNU6-40P-201ENST00000384254 METTL16Q86W50 562 aaKnown RBP8.53□□□□□ -1.04
RNU6-40P-201ENST00000384254 MICALL1Q8N3F8 863 aa8.53□□□□□ -1.04
RNU6-40P-201ENST00000384254 TRPM4Q8TD43 1214 aa8.53□□□□□ -1.04
RNU6-40P-201ENST00000384254 DNAJB12Q9NXW2 375 aaKnown RBP8.53□□□□□ -1.04
RNU6-40P-201ENST00000384254 PPM1HQ9ULR3 514 aa8.53□□□□□ -1.04
RNU6-40P-201ENST00000384254 AKAP2Q9Y2D5 859 aa8.53□□□□□ -1.04
RNU6-40P-201ENST00000384254 TMEM238LA0A1B0GVL6 79 aa8.52□□□□□ -1.05
RNU6-40P-201ENST00000384254 FAM177BA6PVY3 158 aa8.52□□□□□ -1.05
RNU6-40P-201ENST00000384254 SIN3BO75182 1162 aa8.52□□□□□ -1.05
RNU6-40P-201ENST00000384254 EIF2AK2P19525 551 aaKnown RBP8.52□□□□□ -1.05
RNU6-40P-201ENST00000384254 COL13A1Q5TAT6 717 aaPredicted RBP8.52□□□□□ -1.05
RNU6-40P-201ENST00000384254 USP48Q86UV5 1035 aa8.52□□□□□ -1.05
RNU6-40P-201ENST00000384254 CEP120Q8N960 986 aa8.52□□□□□ -1.05
RNU6-40P-201ENST00000384254 AVENQ9NQS1 362 aaPredicted RBP8.52□□□□□ -1.05
RNU6-40P-201ENST00000384254 HCN2Q9UL51 889 aa8.52□□□□□ -1.05
RNU6-40P-201ENST00000384254 SMNDC1O75940 238 aaKnown RBP eCLIP8.51□□□□□ -1.05
RNU6-40P-201ENST00000384254 SF3A1Q15459 793 aaKnown RBP8.51□□□□□ -1.05
RNU6-40P-201ENST00000384254 HFE2Q6ZVN8 426 aa8.51□□□□□ -1.05
RNU6-40P-201ENST00000384254 CCNJLQ8IV13 435 aa8.51□□□□□ -1.05
RNU6-40P-201ENST00000384254 ZNF654Q8IZM8 581 aa8.51□□□□□ -1.05
RNU6-40P-201ENST00000384254 GLIS3Q8NEA6 775 aa8.51□□□□□ -1.05
RNU6-40P-201ENST00000384254 ASAP3Q8TDY4 903 aa8.51□□□□□ -1.05
RNU6-40P-201ENST00000384254 SREK1Q8WXA9 508 aaKnown RBP8.51□□□□□ -1.05
RNU6-40P-201ENST00000384254 DZANK1Q9NVP4 752 aa8.51□□□□□ -1.05
RNU6-40P-201ENST00000384254 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.51□□□□□ -1.05
RNU6-40P-201ENST00000384254 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.51□□□□□ -1.05
RNU6-40P-201ENST00000384254 J3QW42 95 aa8.5□□□□□ -1.05
RNU6-40P-201ENST00000384254 PDE2AO00408 941 aaPredicted RBP8.5□□□□□ -1.05
RNU6-40P-201ENST00000384254 ADH6P28332 368 aa8.5□□□□□ -1.05
RNU6-40P-201ENST00000384254 PCBP4P57723 403 aaKnown RBP8.5□□□□□ -1.05
RNU6-40P-201ENST00000384254 CCDC85BQ15834 202 aaPredicted RBP8.5□□□□□ -1.05
RNU6-40P-201ENST00000384254 TMEM102Q8N9M5 508 aaPredicted RBP8.5□□□□□ -1.05
RNU6-40P-201ENST00000384254 TCF12Q99081 682 aa8.5□□□□□ -1.05
RNU6-40P-201ENST00000384254 PBX4Q9BYU1 374 aa8.5□□□□□ -1.05
RNU6-40P-201ENST00000384254 ABCB6Q9NP58 842 aa8.5□□□□□ -1.05
RNU6-40P-201ENST00000384254 NXF1Q9UBU9 619 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms