RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 RBSNQ9H1K0 784 aa5.7□□□□□ -1.5
RNU6-1040P-201ENST00000383974 CXXC1Q9P0U4 656 aaPredicted RBP5.7□□□□□ -1.5
RNU6-1040P-201ENST00000383974 IL22RA1Q8N6P7 574 aa5.69□□□□□ -1.5
RNU6-1040P-201ENST00000383974 MRPL18Q9H0U6 180 aaKnown RBP5.69□□□□□ -1.5
RNU6-1040P-201ENST00000383974 AKTIPQ9H8T0 292 aa5.69□□□□□ -1.5
RNU6-1040P-201ENST00000383974 TRIM33Q9UPN9 1127 aa5.69□□□□□ -1.5
RNU6-1040P-201ENST00000383974 UBAP1LF5GYI3 381 aa5.68□□□□□ -1.5
RNU6-1040P-201ENST00000383974 ALX3O95076 343 aa5.68□□□□□ -1.5
RNU6-1040P-201ENST00000383974 SRPK2P78362 688 aaKnown RBP5.68□□□□□ -1.5
RNU6-1040P-201ENST00000383974 NAA30Q147X3 362 aaPredicted RBP5.68□□□□□ -1.5
RNU6-1040P-201ENST00000383974 SETDB1Q15047 1291 aa5.68□□□□□ -1.5
RNU6-1040P-201ENST00000383974 TMEM164Q5U3C3 297 aa5.68□□□□□ -1.5
RNU6-1040P-201ENST00000383974 PRR23CQ6ZRP0 262 aa5.68□□□□□ -1.5
RNU6-1040P-201ENST00000383974 NBPF11Q86T75 865 aa5.68□□□□□ -1.5
RNU6-1040P-201ENST00000383974 F8W735 103 aaPredicted RBP5.67□□□□□ -1.5
RNU6-1040P-201ENST00000383974 HYAL3O43820 417 aaPredicted RBP5.67□□□□□ -1.5
RNU6-1040P-201ENST00000383974 ZAP70P43403 619 aa5.67□□□□□ -1.5
RNU6-1040P-201ENST00000383974 COL13A1Q5TAT6 717 aaPredicted RBP5.67□□□□□ -1.5
RNU6-1040P-201ENST00000383974 DZIP1LQ8IYY4 767 aaKnown RBP5.67□□□□□ -1.5
RNU6-1040P-201ENST00000383974 OR13H1Q8NG92 308 aa5.67□□□□□ -1.5
RNU6-1040P-201ENST00000383974 SRA1Q9HD15 236 aaKnown RBP5.67□□□□□ -1.5
RNU6-1040P-201ENST00000383974 ATG7O95352 703 aa5.66□□□□□ -1.5
RNU6-1040P-201ENST00000383974 ATP11AP98196 1134 aa5.66□□□□□ -1.5
RNU6-1040P-201ENST00000383974 MAP4K3Q8IVH8 894 aa5.66□□□□□ -1.5
RNU6-1040P-201ENST00000383974 AGGF1Q8N302 714 aaeCLIP5.66□□□□□ -1.5
RNU6-1040P-201ENST00000383974 TMEM130Q8N3G9 435 aa5.66□□□□□ -1.5
RNU6-1040P-201ENST00000383974 PIK3R5Q8WYR1 880 aa5.66□□□□□ -1.5
RNU6-1040P-201ENST00000383974 FAM13BQ9NYF5 915 aa5.66□□□□□ -1.5
RNU6-1040P-201ENST00000383974 PTCD1O75127 700 aaKnown RBP5.65□□□□□ -1.5
RNU6-1040P-201ENST00000383974 TXNDC11Q6PKC3 985 aa5.65□□□□□ -1.5
RNU6-1040P-201ENST00000383974 Q6ZS46 218 aa5.65□□□□□ -1.5
RNU6-1040P-201ENST00000383974 GALNT11Q8NCW6 608 aa5.65□□□□□ -1.5
RNU6-1040P-201ENST00000383974 GPR152Q8TDT2 470 aa5.65□□□□□ -1.5
RNU6-1040P-201ENST00000383974 DCAF11Q8TEB1 546 aa5.65□□□□□ -1.5
RNU6-1040P-201ENST00000383974 KRTAP9-2Q9BYQ4 174 aa5.65□□□□□ -1.5
RNU6-1040P-201ENST00000383974 LACRTQ9GZZ8 138 aa5.65□□□□□ -1.5
RNU6-1040P-201ENST00000383974 RNF112Q9ULX5 631 aa5.65□□□□□ -1.5
RNU6-1040P-201ENST00000383974 PPME1Q9Y570 386 aa5.65□□□□□ -1.5
RNU6-1040P-201ENST00000383974 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.64□□□□□ -1.51
RNU6-1040P-201ENST00000383974 ZBTB39O15060 712 aa5.64□□□□□ -1.51
RNU6-1040P-201ENST00000383974 HYAL2Q12891 473 aa5.64□□□□□ -1.51
RNU6-1040P-201ENST00000383974 ADAMTSL4Q6UY14 1074 aa5.64□□□□□ -1.51
RNU6-1040P-201ENST00000383974 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.64□□□□□ -1.51
RNU6-1040P-201ENST00000383974 CACTIN-AS1Q8N1I8 211 aa5.64□□□□□ -1.51
RNU6-1040P-201ENST00000383974 CLP1Q92989 425 aaKnown RBP5.64□□□□□ -1.51
RNU6-1040P-201ENST00000383974 MUC3BQ9H195 1237 aa5.64□□□□□ -1.51
RNU6-1040P-201ENST00000383974 STIM2Q9P246 746 aa5.64□□□□□ -1.51
RNU6-1040P-201ENST00000383974 SLAIN2Q9P270 581 aa5.64□□□□□ -1.51
RNU6-1040P-201ENST00000383974 LINC01387J3KSC0 135 aa5.63□□□□□ -1.51
RNU6-1040P-201ENST00000383974 SMNDC1O75940 238 aaKnown RBP eCLIP5.63□□□□□ -1.51
RNU6-1040P-201ENST00000383974 KIF4AO95239 1232 aa5.63□□□□□ -1.51
RNU6-1040P-201ENST00000383974 WISP1O95388 367 aa5.63□□□□□ -1.51
RNU6-1040P-201ENST00000383974 CYP2E1P05181 493 aaPredicted RBP5.63□□□□□ -1.51
RNU6-1040P-201ENST00000383974 GLB1P16278 677 aa5.63□□□□□ -1.51
RNU6-1040P-201ENST00000383974 FSTP19883 344 aa5.63□□□□□ -1.51
RNU6-1040P-201ENST00000383974 SCNN1AP37088 669 aa5.63□□□□□ -1.51
RNU6-1040P-201ENST00000383974 CEP135Q66GS9 1140 aa5.63□□□□□ -1.51
RNU6-1040P-201ENST00000383974 ABTB2Q8N961 1025 aa5.63□□□□□ -1.51
RNU6-1040P-201ENST00000383974 SPACA7Q96KW9 195 aa5.63□□□□□ -1.51
RNU6-1040P-201ENST00000383974 RASSF4Q9H2L5 321 aa5.63□□□□□ -1.51
RNU6-1040P-201ENST00000383974 ABI2Q9NYB9 513 aaPredicted RBP5.63□□□□□ -1.51
RNU6-1040P-201ENST00000383974 FNDC3AQ9Y2H6 1198 aaKnown RBP5.63□□□□□ -1.51
RNU6-1040P-201ENST00000383974 TM4SF5O14894 197 aa5.62□□□□□ -1.51
RNU6-1040P-201ENST00000383974 TTC39BQ5VTQ0 682 aaPredicted RBP5.62□□□□□ -1.51
RNU6-1040P-201ENST00000383974 PBXIP1Q96AQ6 731 aa5.62□□□□□ -1.51
RNU6-1040P-201ENST00000383974 CARD10Q9BWT7 1032 aa5.62□□□□□ -1.51
RNU6-1040P-201ENST00000383974 SEPT3Q9UH03 358 aa5.62□□□□□ -1.51
RNU6-1040P-201ENST00000383974 KRTAP9-6A0A140TA67 174 aa5.61□□□□□ -1.51
RNU6-1040P-201ENST00000383974 EPHA1P21709 976 aa5.61□□□□□ -1.51
RNU6-1040P-201ENST00000383974 ATP2B4P23634 1241 aa5.61□□□□□ -1.51
RNU6-1040P-201ENST00000383974 CDC27P30260 824 aa5.61□□□□□ -1.51
RNU6-1040P-201ENST00000383974 CDC25BP30305 580 aa5.61□□□□□ -1.51
RNU6-1040P-201ENST00000383974 CD68P34810 354 aaPredicted RBP5.61□□□□□ -1.51
RNU6-1040P-201ENST00000383974 ACAD11Q709F0 780 aa5.61□□□□□ -1.51
RNU6-1040P-201ENST00000383974 ATCAYQ86WG3 371 aa5.61□□□□□ -1.51
RNU6-1040P-201ENST00000383974 NUDT16Q96DE0 195 aaKnown RBP5.61□□□□□ -1.51
RNU6-1040P-201ENST00000383974 UBL7Q96S82 380 aaPredicted RBP5.61□□□□□ -1.51
RNU6-1040P-201ENST00000383974 KCNK4Q9NYG8 393 aa5.61□□□□□ -1.51
RNU6-1040P-201ENST00000383974 TMEM63CQ9P1W3 806 aa5.61□□□□□ -1.51
RNU6-1040P-201ENST00000383974 KANSL3Q9P2N6 904 aa5.61□□□□□ -1.51
RNU6-1040P-201ENST00000383974 PDE12Q6L8Q7 609 aaKnown RBP5.6□□□□□ -1.51
RNU6-1040P-201ENST00000383974 ZNF438Q7Z4V0 828 aa5.6□□□□□ -1.51
RNU6-1040P-201ENST00000383974 NCAPG2Q86XI2 1143 aa5.6□□□□□ -1.51
RNU6-1040P-201ENST00000383974 PBX4Q9BYU1 374 aa5.6□□□□□ -1.51
RNU6-1040P-201ENST00000383974 ELP3Q9H9T3 547 aa5.6□□□□□ -1.51
RNU6-1040P-201ENST00000383974 SH2B1Q9NRF2 756 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1040P-201ENST00000383974 FSCN2O14926 492 aa5.59□□□□□ -1.51
RNU6-1040P-201ENST00000383974 CEP120Q8N960 986 aa5.59□□□□□ -1.51
RNU6-1040P-201ENST00000383974 FOXD4L4Q8WXT5 416 aaPredicted RBP5.59□□□□□ -1.51
RNU6-1040P-201ENST00000383974 CCDC97Q96F63 343 aaPredicted RBP5.59□□□□□ -1.51
RNU6-1040P-201ENST00000383974 CEP41Q9BYV8 373 aa5.59□□□□□ -1.51
RNU6-1040P-201ENST00000383974 PCMTD2Q9NV79 361 aa5.59□□□□□ -1.51
RNU6-1040P-201ENST00000383974 RAXQ9Y2V3 346 aa5.59□□□□□ -1.51
RNU6-1040P-201ENST00000383974 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.59□□□□□ -1.51
RNU6-1040P-201ENST00000383974 ADAM11O75078 769 aa5.58□□□□□ -1.52
RNU6-1040P-201ENST00000383974 ACPPP15309 386 aa5.58□□□□□ -1.52
RNU6-1040P-201ENST00000383974 PTPRAP18433 802 aa5.58□□□□□ -1.52
RNU6-1040P-201ENST00000383974 SSTR4P31391 388 aa5.58□□□□□ -1.52
RNU6-1040P-201ENST00000383974 FAM117BQ6P1L5 589 aa5.58□□□□□ -1.52
RNU6-1040P-201ENST00000383974 KIAA1211Q6ZU35 1233 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms