RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 BEGAINQ9BUH8 593 aa33.99■■■■□ 3.03
NPHP3-202ENST00000383282 STK31Q9BXU1 1019 aa33.99■■■■□ 3.03
NPHP3-202ENST00000383282 PODXL2Q9NZ53 605 aa33.99■■■■□ 3.03
NPHP3-202ENST00000383282 ANKIB1Q9P2G1 1089 aa33.99■■■■□ 3.03
NPHP3-202ENST00000383282 SHTN1A0MZ66 631 aa33.98■■■■□ 3.03
NPHP3-202ENST00000383282 G3V3G9 751 aa33.98■■■■□ 3.03
NPHP3-202ENST00000383282 DOK7Q18PE1 504 aa33.98■■■■□ 3.03
NPHP3-202ENST00000383282 DCAF8Q5TAQ9 597 aa33.98■■■■□ 3.03
NPHP3-202ENST00000383282 MAP3K2Q9Y2U5 619 aa33.98■■■■□ 3.03
NPHP3-202ENST00000383282 COL4A1P02462 1669 aa33.97■■■■□ 3.03
NPHP3-202ENST00000383282 ZNF408Q9H9D4 720 aa33.97■■■■□ 3.03
NPHP3-202ENST00000383282 GGA1Q9UJY5 639 aa33.97■■■■□ 3.03
NPHP3-202ENST00000383282 UFL1O94874 794 aa33.96■■■■□ 3.03
NPHP3-202ENST00000383282 CCDC27Q2M243 656 aa33.96■■■■□ 3.03
NPHP3-202ENST00000383282 KSR2Q6VAB6 950 aa33.96■■■■□ 3.03
NPHP3-202ENST00000383282 SAPCD2Q86UD0 394 aa33.96■■■■□ 3.03
NPHP3-202ENST00000383282 TSR2Q969E8 191 aaKnown RBP33.96■■■■□ 3.03
NPHP3-202ENST00000383282 HSPA8P11142 646 aaKnown RBP33.95■■■■□ 3.03
NPHP3-202ENST00000383282 JARID2Q92833 1246 aaPredicted RBP33.95■■■■□ 3.03
NPHP3-202ENST00000383282 CCDC85AQ96PX6 553 aaPredicted RBP33.95■■■■□ 3.03
NPHP3-202ENST00000383282 NEXNQ0ZGT2 675 aa33.94■■■■□ 3.02
NPHP3-202ENST00000383282 SAMD7Q7Z3H4 446 aa33.94■■■■□ 3.02
NPHP3-202ENST00000383282 ANKRD18AQ8IVF6 992 aa33.94■■■■□ 3.02
NPHP3-202ENST00000383282 HHIPL1Q96JK4 782 aa33.94■■■■□ 3.02
NPHP3-202ENST00000383282 PI4KAP2A4QPH2 592 aa33.93■■■■□ 3.02
NPHP3-202ENST00000383282 CCDC184Q52MB2 194 aa33.93■■■■□ 3.02
NPHP3-202ENST00000383282 PI4KAP1Q8N8J0 262 aa33.93■■■■□ 3.02
NPHP3-202ENST00000383282 MAP2K2P36507 400 aa33.92■■■■□ 3.02
NPHP3-202ENST00000383282 TBC1D10BQ4KMP7 808 aaPredicted RBP33.92■■■■□ 3.02
NPHP3-202ENST00000383282 WWC1Q8IX03 1113 aa33.92■■■■□ 3.02
NPHP3-202ENST00000383282 RTL9Q8NET4 1388 aa33.92■■■■□ 3.02
NPHP3-202ENST00000383282 THSD7BQ9C0I4 1608 aa33.91■■■■□ 3.02
NPHP3-202ENST00000383282 CDC5LQ99459 802 aaKnown RBP33.91■■■■□ 3.02
NPHP3-202ENST00000383282 KCNQ5Q9NR82 932 aa33.91■■■■□ 3.02
NPHP3-202ENST00000383282 TWISTNBQ3B726 338 aaPredicted RBP33.9■■■■□ 3.02
NPHP3-202ENST00000383282 USP48Q86UV5 1035 aa33.9■■■■□ 3.02
NPHP3-202ENST00000383282 XDHP47989 1333 aa33.89■■■■□ 3.02
NPHP3-202ENST00000383282 CTSWP56202 376 aa33.89■■■■□ 3.02
NPHP3-202ENST00000383282 RBM26Q5T8P6 1007 aaKnown RBP33.89■■■■□ 3.02
NPHP3-202ENST00000383282 IGKV5-2P06315 115 aa33.88■■■■□ 3.01
NPHP3-202ENST00000383282 VIL1P09327 827 aaKnown RBP33.88■■■■□ 3.01
NPHP3-202ENST00000383282 DCPSQ96C86 337 aaKnown RBP33.88■■■■□ 3.01
NPHP3-202ENST00000383282 AOC2O75106 756 aa33.87■■■■□ 3.01
NPHP3-202ENST00000383282 ATP2B4P23634 1241 aa33.87■■■■□ 3.01
NPHP3-202ENST00000383282 KRT26Q7Z3Y9 468 aa33.87■■■■□ 3.01
NPHP3-202ENST00000383282 IL16Q14005 1332 aa33.86■■■■□ 3.01
NPHP3-202ENST00000383282 KIF4BQ2VIQ3 1234 aa33.86■■■■□ 3.01
NPHP3-202ENST00000383282 EGFRP00533 1210 aa33.85■■■■□ 3.01
NPHP3-202ENST00000383282 NCBP3Q53F19 620 aaKnown RBP33.85■■■■□ 3.01
NPHP3-202ENST00000383282 SLC4A2P04920 1241 aa33.84■■■■□ 3.01
NPHP3-202ENST00000383282 NEURL1BA8MQ27 555 aa33.83■■■■□ 3.01
NPHP3-202ENST00000383282 CWF19L2Q2TBE0 894 aaKnown RBP33.83■■■■□ 3.01
NPHP3-202ENST00000383282 TTLL11Q8NHH1 800 aa33.83■■■■□ 3.01
NPHP3-202ENST00000383282 MRS2Q9HD23 443 aa33.83■■■■□ 3.01
NPHP3-202ENST00000383282 HUNKP57058 714 aa33.82■■■■□ 3
NPHP3-202ENST00000383282 AGBL3Q8NEM8 1001 aa33.82■■■■□ 3
NPHP3-202ENST00000383282 CA12O43570 354 aa33.81■■■■□ 3
NPHP3-202ENST00000383282 RSBN1LQ6PCB5 846 aaPredicted RBP33.81■■■■□ 3
NPHP3-202ENST00000383282 BSDC1Q9NW68 430 aaPredicted RBP33.81■■■■□ 3
NPHP3-202ENST00000383282 G2E3Q7L622 706 aa33.8■■■■□ 3
NPHP3-202ENST00000383282 GREM2Q9H772 168 aa33.8■■■■□ 3
NPHP3-202ENST00000383282 ANP32CO43423 234 aa33.79■■■■□ 3
NPHP3-202ENST00000383282 BRPF1P55201 1214 aaPredicted RBP33.79■■■■□ 3
NPHP3-202ENST00000383282 PODNQ7Z5L7 613 aa33.79■■■■□ 3
NPHP3-202ENST00000383282 SULF1Q8IWU6 871 aa33.79■■■■□ 3
NPHP3-202ENST00000383282 C2orf69Q8N8R5 385 aa33.79■■■■□ 3
NPHP3-202ENST00000383282 GBA2Q9HCG7 927 aaPredicted RBP33.79■■■■□ 3
NPHP3-202ENST00000383282 ADM5C9JUS6 153 aa33.78■■■■□ 3
NPHP3-202ENST00000383282 FLIIQ13045 1269 aa33.78■■■■□ 3
NPHP3-202ENST00000383282 NOGQ13253 232 aa33.78■■■■□ 3
NPHP3-202ENST00000383282 DLK2Q6UY11 383 aa33.78■■■■□ 3
NPHP3-202ENST00000383282 UBE3BQ7Z3V4 1068 aa33.78■■■■□ 3
NPHP3-202ENST00000383282 GGA3Q9NZ52 723 aa33.78■■■■□ 3
NPHP3-202ENST00000383282 ZNF609O15014 1411 aa33.78■■■■□ 3
NPHP3-202ENST00000383282 H7C1W4 665 aa33.77■■■■□ 3
NPHP3-202ENST00000383282 MINPP1Q9UNW1 487 aa33.77■■■■□ 3
NPHP3-202ENST00000383282 SCN9AQ15858 1988 aa33.77■■■■□ 3
NPHP3-202ENST00000383282 USP17L3A6NCW0 530 aa33.76■■■□□ 2.99
NPHP3-202ENST00000383282 USP17L4A6NCW7 530 aa33.76■■■□□ 2.99
NPHP3-202ENST00000383282 IGHMBP2P38935 993 aaKnown RBP33.76■■■□□ 2.99
NPHP3-202ENST00000383282 ZNF280AP59817 542 aaPredicted RBP33.76■■■□□ 2.99
NPHP3-202ENST00000383282 FKBP5Q13451 457 aaPredicted RBP33.76■■■□□ 2.99
NPHP3-202ENST00000383282 USP17L1Q7RTZ2 530 aa33.76■■■□□ 2.99
NPHP3-202ENST00000383282 MYH16Q9H6N6 1097 aa33.76■■■□□ 2.99
NPHP3-202ENST00000383282 FANCIQ9NVI1 1328 aa33.76■■■□□ 2.99
NPHP3-202ENST00000383282 MED23Q9ULK4 1368 aa33.75■■■□□ 2.99
NPHP3-202ENST00000383282 TSKSQ9UJT2 592 aa33.75■■■□□ 2.99
NPHP3-202ENST00000383282 GCKRQ14397 625 aa33.74■■■□□ 2.99
NPHP3-202ENST00000383282 DNAAF4Q8WXU2 420 aa33.74■■■□□ 2.99
NPHP3-202ENST00000383282 USP17L8P0C7I0 530 aa33.73■■■□□ 2.99
NPHP3-202ENST00000383282 CCT4P50991 539 aaKnown RBP33.73■■■□□ 2.99
NPHP3-202ENST00000383282 RGMBQ6NW40 437 aa33.73■■■□□ 2.99
NPHP3-202ENST00000383282 WDR63Q8IWG1 891 aa33.73■■■□□ 2.99
NPHP3-202ENST00000383282 PLA2G12BQ9BX93 195 aa33.73■■■□□ 2.99
NPHP3-202ENST00000383282 SALL2Q9Y467 1007 aaPredicted RBP33.73■■■□□ 2.99
NPHP3-202ENST00000383282 SCARF1Q14162 830 aa33.72■■■□□ 2.99
NPHP3-202ENST00000383282 ABHD8Q96I13 439 aa33.72■■■□□ 2.99
NPHP3-202ENST00000383282 GMLQ99445 158 aa33.71■■■□□ 2.99
NPHP3-202ENST00000383282 MYOZ2Q9NPC6 264 aa33.71■■■□□ 2.99
NPHP3-202ENST00000383282 MYH3P11055 1940 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms