RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 LAMB2P55268 1798 aa21.99■■□□□ 1.11
CD9-202ENST00000382515 CIAO1O76071 339 aa21.99■■□□□ 1.11
CD9-202ENST00000382515 EYA3Q99504 573 aa21.99■■□□□ 1.11
CD9-202ENST00000382515 RIPOR2Q9Y4F9 1068 aa21.99■■□□□ 1.11
CD9-202ENST00000382515 MROH5Q6ZUA9 1318 aa21.99■■□□□ 1.11
CD9-202ENST00000382515 COL11A2P13942 1736 aaPredicted RBP21.98■■□□□ 1.11
CD9-202ENST00000382515 SSH3Q8TE77 659 aa21.98■■□□□ 1.11
CD9-202ENST00000382515 GGA1Q9UJY5 639 aa21.98■■□□□ 1.11
CD9-202ENST00000382515 BRCA1P38398 1863 aaKnown RBP21.98■■□□□ 1.11
CD9-202ENST00000382515 SLX4Q8IY92 1834 aa21.97■■□□□ 1.11
CD9-202ENST00000382515 EYA2O00167 538 aa21.97■■□□□ 1.11
CD9-202ENST00000382515 HMMRO75330 724 aa21.97■■□□□ 1.11
CD9-202ENST00000382515 GPSM2P81274 684 aa21.97■■□□□ 1.11
CD9-202ENST00000382515 OLFM4Q6UX06 510 aa21.97■■□□□ 1.11
CD9-202ENST00000382515 ZNF594Q96JF6 807 aaPredicted RBP21.97■■□□□ 1.11
CD9-202ENST00000382515 ZC3H4Q9UPT8 1303 aaKnown RBP21.97■■□□□ 1.11
CD9-202ENST00000382515 IL15P40933 162 aaPredicted RBP21.96■■□□□ 1.11
CD9-202ENST00000382515 CHRNDQ07001 517 aa21.96■■□□□ 1.11
CD9-202ENST00000382515 POLA2Q14181 598 aa21.96■■□□□ 1.11
CD9-202ENST00000382515 CEP85Q6P2H3 762 aa21.96■■□□□ 1.11
CD9-202ENST00000382515 TBC1D16Q8TBP0 767 aa21.96■■□□□ 1.11
CD9-202ENST00000382515 SNED1Q8TER0 1413 aa21.96■■□□□ 1.11
CD9-202ENST00000382515 C6orf229H3BNL8 230 aa21.95■■□□□ 1.1
CD9-202ENST00000382515 IARSP41252 1262 aaKnown RBP21.95■■□□□ 1.1
CD9-202ENST00000382515 WASHC4Q2M389 1173 aa21.95■■□□□ 1.1
CD9-202ENST00000382515 ZC3H12CQ9C0D7 883 aaKnown RBP21.95■■□□□ 1.1
CD9-202ENST00000382515 UBE4AQ14139 1066 aa21.94■■□□□ 1.1
CD9-202ENST00000382515 C9orf131Q5VYM1 1079 aa21.94■■□□□ 1.1
CD9-202ENST00000382515 JDP2Q8WYK2 163 aa21.94■■□□□ 1.1
CD9-202ENST00000382515 POLLQ9UGP5 575 aa21.94■■□□□ 1.1
CD9-202ENST00000382515 ARFGEF1Q9Y6D6 1849 aa21.94■■□□□ 1.1
CD9-202ENST00000382515 PNMA6EA0A0J9YXQ4 647 aa21.93■■□□□ 1.1
CD9-202ENST00000382515 KIAA2012Q0VF49 1180 aa21.93■■□□□ 1.1
CD9-202ENST00000382515 G3BP1Q13283 466 aaKnown RBP eCLIP21.93■■□□□ 1.1
CD9-202ENST00000382515 HSP90AB4PQ58FF6 505 aa21.93■■□□□ 1.1
CD9-202ENST00000382515 UFL1O94874 794 aa21.92■■□□□ 1.1
CD9-202ENST00000382515 PDE8BO95263 885 aa21.92■■□□□ 1.1
CD9-202ENST00000382515 KCNJ4P48050 445 aa21.92■■□□□ 1.1
CD9-202ENST00000382515 RASSF7Q02833 373 aa21.92■■□□□ 1.1
CD9-202ENST00000382515 METTL24Q5JXM2 366 aa21.92■■□□□ 1.1
CD9-202ENST00000382515 C15orf52Q6ZUT6 534 aaKnown RBP21.92■■□□□ 1.1
CD9-202ENST00000382515 PUS3Q9BZE2 481 aaKnown RBP21.92■■□□□ 1.1
CD9-202ENST00000382515 C1orf115Q9H7X2 142 aa21.92■■□□□ 1.1
CD9-202ENST00000382515 ZNF277Q9NRM2 450 aaPredicted RBP21.92■■□□□ 1.1
CD9-202ENST00000382515 RNF181Q9P0P0 153 aa21.92■■□□□ 1.1
CD9-202ENST00000382515 CEP126Q9P2H0 1117 aa21.92■■□□□ 1.1
CD9-202ENST00000382515 NOP58Q9Y2X3 529 aaKnown RBP21.92■■□□□ 1.1
CD9-202ENST00000382515 MYH3P11055 1940 aa21.92■■□□□ 1.1
CD9-202ENST00000382515 ZNF804BA4D1E1 1349 aa21.91■■□□□ 1.1
CD9-202ENST00000382515 PPIP5K2O43314 1243 aa21.91■■□□□ 1.1
CD9-202ENST00000382515 LRRC24Q50LG9 513 aa21.91■■□□□ 1.1
CD9-202ENST00000382515 LARGE2Q8N3Y3 721 aa21.91■■□□□ 1.1
CD9-202ENST00000382515 KLHDC4Q8TBB5 520 aa21.91■■□□□ 1.1
CD9-202ENST00000382515 CRBNQ96SW2 442 aa21.91■■□□□ 1.1
CD9-202ENST00000382515 ATG9AQ7Z3C6 839 aa21.9■■□□□ 1.1
CD9-202ENST00000382515 AKAP2Q9Y2D5 859 aa21.89■■□□□ 1.09
CD9-202ENST00000382515 SURF6O75683 361 aaKnown RBP21.88■■□□□ 1.09
CD9-202ENST00000382515 DPY19L2Q6NUT2 758 aa21.88■■□□□ 1.09
CD9-202ENST00000382515 PODNQ7Z5L7 613 aa21.88■■□□□ 1.09
CD9-202ENST00000382515 ERC1Q8IUD2 1116 aa21.88■■□□□ 1.09
CD9-202ENST00000382515 NIM1KQ8IY84 436 aa21.88■■□□□ 1.09
CD9-202ENST00000382515 SIL1Q9H173 461 aa21.88■■□□□ 1.09
CD9-202ENST00000382515 PA2G4Q9UQ80 394 aaKnown RBP21.88■■□□□ 1.09
CD9-202ENST00000382515 G3V3G9 751 aa21.87■■□□□ 1.09
CD9-202ENST00000382515 FZD9O00144 591 aa21.87■■□□□ 1.09
CD9-202ENST00000382515 TAF5LO75529 589 aa21.87■■□□□ 1.09
CD9-202ENST00000382515 PRELPP51888 382 aa21.87■■□□□ 1.09
CD9-202ENST00000382515 PUM3Q15397 648 aaKnown RBP21.87■■□□□ 1.09
CD9-202ENST00000382515 DCAF8Q5TAQ9 597 aa21.87■■□□□ 1.09
CD9-202ENST00000382515 VGLL2Q8N8G2 317 aa21.87■■□□□ 1.09
CD9-202ENST00000382515 HELBQ8NG08 1087 aaPredicted RBP21.87■■□□□ 1.09
CD9-202ENST00000382515 ZNRF3Q9ULT6 936 aa21.87■■□□□ 1.09
CD9-202ENST00000382515 MED23Q9ULK4 1368 aa21.87■■□□□ 1.09
CD9-202ENST00000382515 IFIT1P09914 478 aaKnown RBP21.86■■□□□ 1.09
CD9-202ENST00000382515 AOC3Q16853 763 aa21.86■■□□□ 1.09
CD9-202ENST00000382515 SIRT2Q8IXJ6 389 aa21.86■■□□□ 1.09
CD9-202ENST00000382515 LPIN2Q92539 896 aa21.86■■□□□ 1.09
CD9-202ENST00000382515 COA1Q9GZY4 146 aa21.86■■□□□ 1.09
CD9-202ENST00000382515 RAB11FIP3O75154 756 aa21.85■■□□□ 1.09
CD9-202ENST00000382515 EIF6P56537 245 aaKnown RBP21.85■■□□□ 1.09
CD9-202ENST00000382515 GPR108Q9NPR9 543 aa21.85■■□□□ 1.09
CD9-202ENST00000382515 RIMBP2O15034 1052 aa21.84■■□□□ 1.09
CD9-202ENST00000382515 OS9Q13438 667 aaPredicted RBP21.84■■□□□ 1.09
CD9-202ENST00000382515 CAVIN4Q5BKX8 364 aa21.84■■□□□ 1.09
CD9-202ENST00000382515 SLC51AQ86UW1 340 aa21.84■■□□□ 1.09
CD9-202ENST00000382515 FER1L6Q2WGJ9 1857 aa21.83■■□□□ 1.09
CD9-202ENST00000382515 FGFR2P21802 821 aa21.83■■□□□ 1.09
CD9-202ENST00000382515 LRRC37AA6NMS7 1700 aa21.83■■□□□ 1.08
CD9-202ENST00000382515 ZBTB22O15209 634 aa21.82■■□□□ 1.08
CD9-202ENST00000382515 SLC5A1P13866 664 aa21.82■■□□□ 1.08
CD9-202ENST00000382515 TNIP1Q15025 636 aa21.82■■□□□ 1.08
CD9-202ENST00000382515 ZNF804AQ7Z570 1209 aa21.82■■□□□ 1.08
CD9-202ENST00000382515 GLTPD2A6NH11 291 aa21.81■■□□□ 1.08
CD9-202ENST00000382515 YY1P25490 414 aa21.81■■□□□ 1.08
CD9-202ENST00000382515 EXOC6Q8TAG9 804 aa21.81■■□□□ 1.08
CD9-202ENST00000382515 PCDHB15Q9Y5E8 787 aa21.81■■□□□ 1.08
CD9-202ENST00000382515 COL4A1P02462 1669 aa21.81■■□□□ 1.08
CD9-202ENST00000382515 TAF1P21675 1872 aa21.81■■□□□ 1.08
CD9-202ENST00000382515 SASH1O94885 1247 aa21.8■■□□□ 1.08
CD9-202ENST00000382515 HIBADHP31937 336 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms