RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 LMAN1P49257 510 aa17.46■□□□□ 0.39
CTNS-202ENST00000381870 ENGASEQ8NFI3 743 aa17.46■□□□□ 0.39
CTNS-202ENST00000381870 FBXO18Q8NFZ0 1043 aa17.46■□□□□ 0.39
CTNS-202ENST00000381870 MAP3K19Q56UN5 1328 aa17.45■□□□□ 0.38
CTNS-202ENST00000381870 WASLO00401 505 aaPredicted RBP17.45■□□□□ 0.38
CTNS-202ENST00000381870 ECHDC1Q9NTX5 307 aa17.45■□□□□ 0.38
CTNS-202ENST00000381870 RRP15Q9Y3B9 282 aaKnown RBP17.45■□□□□ 0.38
CTNS-202ENST00000381870 PARP3Q9Y6F1 533 aa17.45■□□□□ 0.38
CTNS-202ENST00000381870 GOLGA5Q8TBA6 731 aa17.45■□□□□ 0.38
CTNS-202ENST00000381870 NUDT16Q96DE0 195 aaKnown RBP17.45■□□□□ 0.38
CTNS-202ENST00000381870 NAT10Q9H0A0 1025 aaKnown RBP17.45■□□□□ 0.38
CTNS-202ENST00000381870 CWC15Q9P013 229 aaKnown RBP17.45■□□□□ 0.38
CTNS-202ENST00000381870 FAM208AQ9UK61 1670 aaKnown RBP17.45■□□□□ 0.38
CTNS-202ENST00000381870 DLC1Q96QB1 1528 aa17.44■□□□□ 0.38
CTNS-202ENST00000381870 SOX12O15370 315 aa17.44■□□□□ 0.38
CTNS-202ENST00000381870 KCNJ6P48051 423 aa17.44■□□□□ 0.38
CTNS-202ENST00000381870 ZSCAN16Q9H4T2 348 aaPredicted RBP17.44■□□□□ 0.38
CTNS-202ENST00000381870 ADAM21Q9UKJ8 722 aa17.44■□□□□ 0.38
CTNS-202ENST00000381870 RCOR1Q9UKL0 485 aa17.44■□□□□ 0.38
CTNS-202ENST00000381870 NPHP4O75161 1426 aaPredicted RBP17.44■□□□□ 0.38
CTNS-202ENST00000381870 RIMS1Q86UR5 1692 aaKnown RBP17.44■□□□□ 0.38
CTNS-202ENST00000381870 TUBB4AP04350 444 aa17.44■□□□□ 0.38
CTNS-202ENST00000381870 FAM160A1Q05DH4 1040 aa17.44■□□□□ 0.38
CTNS-202ENST00000381870 LRRFIP1Q32MZ4 808 aaKnown RBP17.44■□□□□ 0.38
CTNS-202ENST00000381870 DPCR1Q3MIW9 517 aa17.44■□□□□ 0.38
CTNS-202ENST00000381870 CLASRPQ8N2M8 674 aaKnown RBP17.44■□□□□ 0.38
CTNS-202ENST00000381870 FSIP1Q8NA03 581 aa17.44■□□□□ 0.38
CTNS-202ENST00000381870 EVI5LQ96CN4 794 aa17.44■□□□□ 0.38
CTNS-202ENST00000381870 FMNL2Q96PY5 1086 aa17.44■□□□□ 0.38
CTNS-202ENST00000381870 TMEM131LA2VDJ0 1609 aa17.43■□□□□ 0.38
CTNS-202ENST00000381870 A0A0D9SFI3 127 aa17.43■□□□□ 0.38
CTNS-202ENST00000381870 AK7Q96M32 723 aa17.43■□□□□ 0.38
CTNS-202ENST00000381870 USP28Q96RU2 1077 aa17.43■□□□□ 0.38
CTNS-202ENST00000381870 H3BQF6 201 aa17.43■□□□□ 0.38
CTNS-202ENST00000381870 GTF2A1P52655 376 aaPredicted RBP17.43■□□□□ 0.38
CTNS-202ENST00000381870 FAM177A1Q8N128 213 aaPredicted RBP17.43■□□□□ 0.38
CTNS-202ENST00000381870 SRRTQ9BXP5 876 aaKnown RBP17.43■□□□□ 0.38
CTNS-202ENST00000381870 TPM1P09493 284 aa17.42■□□□□ 0.38
CTNS-202ENST00000381870 GNL2Q13823 731 aaKnown RBP17.42■□□□□ 0.38
CTNS-202ENST00000381870 ALDH8A1Q9H2A2 487 aaPredicted RBP17.42■□□□□ 0.38
CTNS-202ENST00000381870 EXOC4Q96A65 974 aa17.42■□□□□ 0.38
CTNS-202ENST00000381870 FUT8Q9BYC5 575 aa17.42■□□□□ 0.38
CTNS-202ENST00000381870 YY1AP1Q9H869 796 aa17.42■□□□□ 0.38
CTNS-202ENST00000381870 PXDNLA1KZ92 1463 aa17.42■□□□□ 0.38
CTNS-202ENST00000381870 NRDCO43847 1150 aa17.41■□□□□ 0.38
CTNS-202ENST00000381870 ME1P48163 572 aa17.41■□□□□ 0.38
CTNS-202ENST00000381870 GOLGA8FQ08AF8 430 aa17.41■□□□□ 0.38
CTNS-202ENST00000381870 GOLGA8DPQ0D2H9 430 aa17.41■□□□□ 0.38
CTNS-202ENST00000381870 HSP90AB4PQ58FF6 505 aa17.41■□□□□ 0.38
CTNS-202ENST00000381870 ICE2Q659A1 982 aa17.41■□□□□ 0.38
CTNS-202ENST00000381870 AEBP2Q6ZN18 517 aaPredicted RBP17.41■□□□□ 0.38
CTNS-202ENST00000381870 SDF4Q9BRK5 362 aa17.41■□□□□ 0.38
CTNS-202ENST00000381870 PARD6BQ9BYG5 372 aa17.41■□□□□ 0.38
CTNS-202ENST00000381870 ARFGAP3Q9NP61 516 aa17.41■□□□□ 0.38
CTNS-202ENST00000381870 HSP90B1P14625 803 aaKnown RBP17.4■□□□□ 0.38
CTNS-202ENST00000381870 ACTN2P35609 894 aa17.4■□□□□ 0.38
CTNS-202ENST00000381870 UTP14AQ9BVJ6 771 aaKnown RBP17.4■□□□□ 0.38
CTNS-202ENST00000381870 PA2G4Q9UQ80 394 aaKnown RBP17.4■□□□□ 0.38
CTNS-202ENST00000381870 BIN1O00499 593 aa17.4■□□□□ 0.38
CTNS-202ENST00000381870 ZNF589Q86UQ0 364 aaPredicted RBP17.4■□□□□ 0.38
CTNS-202ENST00000381870 GPR161Q8N6U8 529 aaKnown RBP17.4■□□□□ 0.38
CTNS-202ENST00000381870 PSD3Q9NYI0 1048 aa17.4■□□□□ 0.38
CTNS-202ENST00000381870 A0A1B0GVL5 298 aa17.39■□□□□ 0.37
CTNS-202ENST00000381870 AACSQ86V21 672 aa17.39■□□□□ 0.37
CTNS-202ENST00000381870 FMR1NBQ8N0W7 255 aaPredicted RBP17.39■□□□□ 0.37
CTNS-202ENST00000381870 GPATCH3Q96I76 525 aa17.39■□□□□ 0.37
CTNS-202ENST00000381870 CCDC61Q9Y6R9 512 aa17.39■□□□□ 0.37
CTNS-202ENST00000381870 PLEKHG2Q9H7P9 1386 aa17.39■□□□□ 0.37
CTNS-202ENST00000381870 PPFIA3O75145 1194 aa17.39■□□□□ 0.37
CTNS-202ENST00000381870 PTPN21Q16825 1174 aa17.39■□□□□ 0.37
CTNS-202ENST00000381870 FOXR1Q6PIV2 292 aa17.39■□□□□ 0.37
CTNS-202ENST00000381870 SIL1Q9H173 461 aa17.39■□□□□ 0.37
CTNS-202ENST00000381870 GEMIN8Q9NWZ8 242 aaKnown RBP17.39■□□□□ 0.37
CTNS-202ENST00000381870 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.39■□□□□ 0.37
CTNS-202ENST00000381870 ITSN1Q15811 1721 aa17.39■□□□□ 0.37
CTNS-202ENST00000381870 PEAK1Q9H792 1746 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 CCP110O43303 1012 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 LMOD1P29536 600 aaPredicted RBP17.38■□□□□ 0.37
CTNS-202ENST00000381870 SCRN1Q12765 414 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 TAF7Q15545 349 aaPredicted RBP17.38■□□□□ 0.37
CTNS-202ENST00000381870 HDGFL1Q5TGJ6 251 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 Q6ZUG5 572 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 IQUBQ8NA54 791 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 LRRC2Q9BYS8 371 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 N4BP2Q86UW6 1770 aaPredicted RBP17.38■□□□□ 0.37
CTNS-202ENST00000381870 C3P01024 1663 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 RGPD1P0DJD0 1748 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 MON2Q7Z3U7 1717 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 VWA3AA6NCI4 1184 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 ATP1A3P13637 1013 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 NCAPHQ15003 741 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 CTR9Q6PD62 1173 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 PACS2Q86VP3 889 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 WDR24Q96S15 920 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 KIAA1468Q9P260 1216 aa17.38■□□□□ 0.37
CTNS-202ENST00000381870 PPP2R3AQ06190 1150 aa17.37■□□□□ 0.37
CTNS-202ENST00000381870 LONRF2Q1L5Z9 754 aa17.37■□□□□ 0.37
CTNS-202ENST00000381870 RSRC2Q7L4I2 434 aaKnown RBP17.37■□□□□ 0.37
CTNS-202ENST00000381870 TEX2Q8IWB9 1127 aa17.37■□□□□ 0.37
CTNS-202ENST00000381870 SNRKQ9NRH2 765 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms