RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 TTLL12Q14166 644 aaPredicted RBP16.05■□□□□ 0.16
SNPH-201ENST00000381867 TFIP11Q9UBB9 837 aaKnown RBP16.05■□□□□ 0.16
SNPH-201ENST00000381867 MAATS1Q7Z4T9 603 aa16.05■□□□□ 0.16
SNPH-201ENST00000381867 EHBP1Q8NDI1 1231 aa16.05■□□□□ 0.16
SNPH-201ENST00000381867 CABLES1Q8TDN4 633 aa16.05■□□□□ 0.16
SNPH-201ENST00000381867 CHPF2Q9P2E5 772 aa16.05■□□□□ 0.16
SNPH-201ENST00000381867 KIF20AO95235 890 aa16.05■□□□□ 0.16
SNPH-201ENST00000381867 STAMBPO95630 424 aa16.05■□□□□ 0.16
SNPH-201ENST00000381867 SEC63Q9UGP8 760 aaKnown RBP16.05■□□□□ 0.16
SNPH-201ENST00000381867 PRDM15P57071 1507 aaPredicted RBP16.04■□□□□ 0.16
SNPH-201ENST00000381867 LINS1Q8NG48 757 aa16.04■□□□□ 0.16
SNPH-201ENST00000381867 ORAI2Q96SN7 254 aa16.04■□□□□ 0.16
SNPH-201ENST00000381867 SSRP1Q08945 709 aaKnown RBP16.04■□□□□ 0.16
SNPH-201ENST00000381867 XAGE3Q8WTP9 111 aa16.04■□□□□ 0.16
SNPH-201ENST00000381867 RNF41Q9H4P4 317 aaPredicted RBP16.04■□□□□ 0.16
SNPH-201ENST00000381867 GOLGA8BA8MQT2 603 aa16.04■□□□□ 0.16
SNPH-201ENST00000381867 CEP112Q8N8E3 955 aa16.04■□□□□ 0.16
SNPH-201ENST00000381867 RAB34Q9BZG1 259 aa16.04■□□□□ 0.16
SNPH-201ENST00000381867 BTG4Q9NY30 223 aa16.04■□□□□ 0.16
SNPH-201ENST00000381867 SYNMO15061 1565 aa16.04■□□□□ 0.16
SNPH-201ENST00000381867 DZIP1Q86YF9 867 aaKnown RBP16.04■□□□□ 0.16
SNPH-201ENST00000381867 ZKSCAN5Q9Y2L8 839 aa16.04■□□□□ 0.16
SNPH-201ENST00000381867 NEBLO76041 1014 aa16.03■□□□□ 0.16
SNPH-201ENST00000381867 FBLN1P23142 703 aa16.03■□□□□ 0.16
SNPH-201ENST00000381867 NF2P35240 595 aa16.03■□□□□ 0.16
SNPH-201ENST00000381867 MTIF2P46199 727 aaKnown RBP16.03■□□□□ 0.16
SNPH-201ENST00000381867 UBE3BQ7Z3V4 1068 aa16.03■□□□□ 0.16
SNPH-201ENST00000381867 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNPH-201ENST00000381867 MKNK2Q9HBH9 465 aa16.03■□□□□ 0.16
SNPH-201ENST00000381867 SLC12A7Q9Y666 1083 aa16.03■□□□□ 0.16
SNPH-201ENST00000381867 UBE4AQ14139 1066 aa16.03■□□□□ 0.16
SNPH-201ENST00000381867 NBPF6Q5VWK0 638 aa16.03■□□□□ 0.16
SNPH-201ENST00000381867 LDHAL6AQ6ZMR3 332 aa16.03■□□□□ 0.16
SNPH-201ENST00000381867 NBPF5PQ86XG9 351 aaPredicted RBP16.03■□□□□ 0.16
SNPH-201ENST00000381867 CTCFLQ8NI51 663 aaPredicted RBP16.03■□□□□ 0.16
SNPH-201ENST00000381867 NBPF4Q96M43 638 aa16.03■□□□□ 0.16
SNPH-201ENST00000381867 NAPBQ9H115 298 aa16.03■□□□□ 0.16
SNPH-201ENST00000381867 ARFGAP3Q9NP61 516 aa16.03■□□□□ 0.16
SNPH-201ENST00000381867 GTF2A1P52655 376 aaPredicted RBP16.03■□□□□ 0.16
SNPH-201ENST00000381867 HSF2BPO75031 334 aa16.03■□□□□ 0.16
SNPH-201ENST00000381867 GPTP24298 496 aa16.03■□□□□ 0.16
SNPH-201ENST00000381867 MINDY4BA8MYZ0 360 aa16.02■□□□□ 0.16
SNPH-201ENST00000381867 CHMP4BP1P59074 171 aa16.02■□□□□ 0.16
SNPH-201ENST00000381867 CKAP4Q07065 602 aaKnown RBP16.02■□□□□ 0.16
SNPH-201ENST00000381867 SETDB2Q96T68 719 aa16.02■□□□□ 0.16
SNPH-201ENST00000381867 GTPBP4Q9BZE4 634 aaKnown RBP16.02■□□□□ 0.16
SNPH-201ENST00000381867 GOLGA8AA7E2F4 631 aa16.02■□□□□ 0.16
SNPH-201ENST00000381867 AATKQ6ZMQ8 1374 aa16.02■□□□□ 0.16
SNPH-201ENST00000381867 KANK3Q6NY19 840 aa16.02■□□□□ 0.16
SNPH-201ENST00000381867 GIMAP6Q6P9H5 292 aa16.02■□□□□ 0.16
SNPH-201ENST00000381867 HOOK3Q86VS8 718 aa16.02■□□□□ 0.16
SNPH-201ENST00000381867 GRM8O00222 908 aa16.02■□□□□ 0.15
SNPH-201ENST00000381867 TMEM266Q2M3C6 531 aa16.02■□□□□ 0.15
SNPH-201ENST00000381867 TTC22Q5TAA0 569 aa16.02■□□□□ 0.15
SNPH-201ENST00000381867 COPS6Q7L5N1 327 aa16.02■□□□□ 0.15
SNPH-201ENST00000381867 ZSWIM4Q9H7M6 989 aa16.02■□□□□ 0.15
SNPH-201ENST00000381867 RTL1A6NKG5 1358 aa16.02■□□□□ 0.15
SNPH-201ENST00000381867 KIF24Q5T7B8 1368 aa16.02■□□□□ 0.15
SNPH-201ENST00000381867 CFAP65Q6ZU64 1925 aaKnown RBP16.02■□□□□ 0.15
SNPH-201ENST00000381867 ZNF213O14771 459 aa16.02■□□□□ 0.15
SNPH-201ENST00000381867 ZSCAN22P10073 491 aaPredicted RBP16.02■□□□□ 0.15
SNPH-201ENST00000381867 FAM114A1Q8IWE2 563 aa16.02■□□□□ 0.15
SNPH-201ENST00000381867 CCT2P78371 535 aaKnown RBP16.01■□□□□ 0.15
SNPH-201ENST00000381867 PYM1Q9BRP8 204 aaKnown RBP16.01■□□□□ 0.15
SNPH-201ENST00000381867 TUBB4AP04350 444 aa16.01■□□□□ 0.15
SNPH-201ENST00000381867 LIG1P18858 919 aa16.01■□□□□ 0.15
SNPH-201ENST00000381867 ANAPC15P60006 121 aa16.01■□□□□ 0.15
SNPH-201ENST00000381867 CTNNBL1Q8WYA6 563 aaPredicted RBP16.01■□□□□ 0.15
SNPH-201ENST00000381867 JADE2Q9NQC1 790 aa16.01■□□□□ 0.15
SNPH-201ENST00000381867 HSPA4P34932 840 aa16.01■□□□□ 0.15
SNPH-201ENST00000381867 WDR78Q5VTH9 848 aa16.01■□□□□ 0.15
SNPH-201ENST00000381867 CEP63Q96MT8 703 aa16.01■□□□□ 0.15
SNPH-201ENST00000381867 ZNF830Q96NB3 372 aaPredicted RBP16.01■□□□□ 0.15
SNPH-201ENST00000381867 LARP6Q9BRS8 491 aaKnown RBP16.01■□□□□ 0.15
SNPH-201ENST00000381867 ZSCAN16Q9H4T2 348 aaPredicted RBP16.01■□□□□ 0.15
SNPH-201ENST00000381867 TMCO5BA8MYB1 307 aa16.01■□□□□ 0.15
SNPH-201ENST00000381867 SKILP12757 684 aa16.01■□□□□ 0.15
SNPH-201ENST00000381867 FAM200AQ8TCP9 573 aa16.01■□□□□ 0.15
SNPH-201ENST00000381867 ZGPATQ8N5A5 531 aaKnown RBP16■□□□□ 0.15
SNPH-201ENST00000381867 CROCC2H7BZ55 1655 aa16■□□□□ 0.15
SNPH-201ENST00000381867 TMEM94Q12767 1356 aa16■□□□□ 0.15
SNPH-201ENST00000381867 GSTO1P78417 241 aa16■□□□□ 0.15
SNPH-201ENST00000381867 CCDC102BQ68D86 513 aa16■□□□□ 0.15
SNPH-201ENST00000381867 UTP14AQ9BVJ6 771 aaKnown RBP16■□□□□ 0.15
SNPH-201ENST00000381867 IGHDP01880 384 aa16■□□□□ 0.15
SNPH-201ENST00000381867 IL15P40933 162 aaPredicted RBP16■□□□□ 0.15
SNPH-201ENST00000381867 TNIP1Q15025 636 aa16■□□□□ 0.15
SNPH-201ENST00000381867 ANKRD44Q8N8A2 993 aa16■□□□□ 0.15
SNPH-201ENST00000381867 SRRTQ9BXP5 876 aaKnown RBP16■□□□□ 0.15
SNPH-201ENST00000381867 C6orf229H3BNL8 230 aa16■□□□□ 0.15
SNPH-201ENST00000381867 ZFYP08048 801 aaPredicted RBP16■□□□□ 0.15
SNPH-201ENST00000381867 NFATC2IPQ8NCF5 419 aa16■□□□□ 0.15
SNPH-201ENST00000381867 UBA5Q9GZZ9 404 aa16■□□□□ 0.15
SNPH-201ENST00000381867 CCDC8Q9H0W5 538 aaPredicted RBP16■□□□□ 0.15
SNPH-201ENST00000381867 RTCBQ9Y3I0 505 aaKnown RBP16■□□□□ 0.15
SNPH-201ENST00000381867 CTAGE15A4D2H0 777 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 CTAGE8P0CG41 777 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 HS1BP3Q53T59 392 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 CTAGE6Q86UF2 777 aa15.99■□□□□ 0.15
SNPH-201ENST00000381867 CTAGE4Q8IX94 777 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms