RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 GRM1Q13255 1194 aa18.19■□□□□ 0.5
SHOX-202ENST00000381575 KSR2Q6VAB6 950 aa18.19■□□□□ 0.5
SHOX-202ENST00000381575 PAXIP1Q6ZW49 1069 aaPredicted RBP18.19■□□□□ 0.5
SHOX-202ENST00000381575 MICALL2Q8IY33 904 aa18.19■□□□□ 0.5
SHOX-202ENST00000381575 CNOT7Q9UIV1 285 aaKnown RBP18.19■□□□□ 0.5
SHOX-202ENST00000381575 RTL9Q8NET4 1388 aa18.19■□□□□ 0.5
SHOX-202ENST00000381575 PSME4Q14997 1843 aa18.18■□□□□ 0.5
SHOX-202ENST00000381575 DEFB115Q30KQ5 88 aa18.18■□□□□ 0.5
SHOX-202ENST00000381575 CST9Q5W186 159 aa18.18■□□□□ 0.5
SHOX-202ENST00000381575 ANKIB1Q9P2G1 1089 aa18.18■□□□□ 0.5
SHOX-202ENST00000381575 IL16Q14005 1332 aa18.18■□□□□ 0.5
SHOX-202ENST00000381575 SLC4A2P04920 1241 aa18.17■□□□□ 0.5
SHOX-202ENST00000381575 CTSWP56202 376 aa18.17■□□□□ 0.5
SHOX-202ENST00000381575 CDHR2Q9BYE9 1310 aa18.17■□□□□ 0.5
SHOX-202ENST00000381575 EGFRP00533 1210 aa18.17■□□□□ 0.5
SHOX-202ENST00000381575 HSP90B1P14625 803 aaKnown RBP18.17■□□□□ 0.5
SHOX-202ENST00000381575 TBC1D10BQ4KMP7 808 aaPredicted RBP18.17■□□□□ 0.5
SHOX-202ENST00000381575 DLK2Q6UY11 383 aa18.17■□□□□ 0.5
SHOX-202ENST00000381575 SAMD7Q7Z3H4 446 aa18.17■□□□□ 0.5
SHOX-202ENST00000381575 EYA3Q99504 573 aa18.17■□□□□ 0.5
SHOX-202ENST00000381575 CHMP4AQ9BY43 222 aa18.17■□□□□ 0.5
SHOX-202ENST00000381575 WDR33Q9C0J8 1336 aaKnown RBP18.16■□□□□ 0.5
SHOX-202ENST00000381575 WTIPA6NIX2 430 aaPredicted RBP18.16■□□□□ 0.5
SHOX-202ENST00000381575 NEURL1BA8MQ27 555 aa18.16■□□□□ 0.5
SHOX-202ENST00000381575 NEXNQ0ZGT2 675 aa18.16■□□□□ 0.5
SHOX-202ENST00000381575 CYP4F22Q6NT55 531 aa18.16■□□□□ 0.5
SHOX-202ENST00000381575 UBE3BQ7Z3V4 1068 aa18.16■□□□□ 0.5
SHOX-202ENST00000381575 ANKRD18AQ8IVF6 992 aa18.16■□□□□ 0.5
SHOX-202ENST00000381575 ZNF408Q9H9D4 720 aa18.16■□□□□ 0.5
SHOX-202ENST00000381575 GGA1Q9UJY5 639 aa18.16■□□□□ 0.5
SHOX-202ENST00000381575 H7C1D1 291 aa18.15■□□□□ 0.5
SHOX-202ENST00000381575 CELF2O95319 508 aaKnown RBP18.15■□□□□ 0.5
SHOX-202ENST00000381575 FLIIQ13045 1269 aa18.15■□□□□ 0.5
SHOX-202ENST00000381575 RBM26Q5T8P6 1007 aaKnown RBP18.15■□□□□ 0.5
SHOX-202ENST00000381575 ZC3H12CQ9C0D7 883 aaKnown RBP18.15■□□□□ 0.5
SHOX-202ENST00000381575 GREM2Q9H772 168 aa18.15■□□□□ 0.5
SHOX-202ENST00000381575 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
SHOX-202ENST00000381575 PODXL2Q9NZ53 605 aa18.15■□□□□ 0.5
SHOX-202ENST00000381575 THSD7BQ9C0I4 1608 aa18.15■□□□□ 0.5
SHOX-202ENST00000381575 G3V3G9 751 aa18.14■□□□□ 0.49
SHOX-202ENST00000381575 EXOSC9Q06265 439 aaKnown RBP18.14■□□□□ 0.49
SHOX-202ENST00000381575 FKBP5Q13451 457 aaPredicted RBP18.14■□□□□ 0.49
SHOX-202ENST00000381575 DCAF8Q5TAQ9 597 aa18.14■□□□□ 0.49
SHOX-202ENST00000381575 FAM9BQ8IZU0 186 aa18.14■□□□□ 0.49
SHOX-202ENST00000381575 TTLL11Q8NHH1 800 aa18.14■□□□□ 0.49
SHOX-202ENST00000381575 AIDAQ96BJ3 306 aa18.14■□□□□ 0.49
SHOX-202ENST00000381575 CAPNS2Q96L46 248 aa18.14■□□□□ 0.49
SHOX-202ENST00000381575 USP48Q86UV5 1035 aa18.13■□□□□ 0.49
SHOX-202ENST00000381575 WBP1LQ9NX94 342 aa18.13■□□□□ 0.49
SHOX-202ENST00000381575 PGAP2Q9UHJ9 254 aa18.13■□□□□ 0.49
SHOX-202ENST00000381575 XDHP47989 1333 aa18.12■□□□□ 0.49
SHOX-202ENST00000381575 ZNF646O15015 1829 aaPredicted RBP18.12■□□□□ 0.49
SHOX-202ENST00000381575 DPF2Q92785 391 aa18.12■□□□□ 0.49
SHOX-202ENST00000381575 CDC5LQ99459 802 aaKnown RBP18.12■□□□□ 0.49
SHOX-202ENST00000381575 TLL2Q9Y6L7 1015 aa18.12■□□□□ 0.49
SHOX-202ENST00000381575 AOC2O75106 756 aa18.11■□□□□ 0.49
SHOX-202ENST00000381575 VAMP4O75379 141 aa18.11■□□□□ 0.49
SHOX-202ENST00000381575 ZC3H15Q8WU90 426 aaKnown RBP18.11■□□□□ 0.49
SHOX-202ENST00000381575 DNAAF4Q8WXU2 420 aa18.11■□□□□ 0.49
SHOX-202ENST00000381575 ASTN2O75129 1339 aaPredicted RBP18.1■□□□□ 0.49
SHOX-202ENST00000381575 F6X3S4 739 aa18.1■□□□□ 0.49
SHOX-202ENST00000381575 H7C1W4 665 aa18.1■□□□□ 0.49
SHOX-202ENST00000381575 RPS12P25398 132 aaKnown RBP18.1■□□□□ 0.49
SHOX-202ENST00000381575 CTCFP49711 727 aaPredicted RBP18.1■□□□□ 0.49
SHOX-202ENST00000381575 LBX1P52954 281 aa18.1■□□□□ 0.49
SHOX-202ENST00000381575 GCKRQ14397 625 aa18.1■□□□□ 0.49
SHOX-202ENST00000381575 WDR63Q8IWG1 891 aa18.1■□□□□ 0.49
SHOX-202ENST00000381575 ADM5C9JUS6 153 aa18.09■□□□□ 0.49
SHOX-202ENST00000381575 VIL1P09327 827 aaKnown RBP18.09■□□□□ 0.49
SHOX-202ENST00000381575 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
SHOX-202ENST00000381575 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
SHOX-202ENST00000381575 CDC37L1Q7L3B6 337 aa18.09■□□□□ 0.49
SHOX-202ENST00000381575 SAPCD2Q86UD0 394 aa18.09■□□□□ 0.49
SHOX-202ENST00000381575 MINPP1Q9UNW1 487 aa18.09■□□□□ 0.49
SHOX-202ENST00000381575 A0A1B0GUL6 1792 aa18.09■□□□□ 0.49
SHOX-202ENST00000381575 ATP2B4P23634 1241 aa18.08■□□□□ 0.49
SHOX-202ENST00000381575 CASP7P55210 303 aa18.08■□□□□ 0.49
SHOX-202ENST00000381575 KIF4BQ2VIQ3 1234 aa18.08■□□□□ 0.49
SHOX-202ENST00000381575 KRT26Q7Z3Y9 468 aa18.08■□□□□ 0.49
SHOX-202ENST00000381575 BSDC1Q9NW68 430 aaPredicted RBP18.08■□□□□ 0.49
SHOX-202ENST00000381575 HSPA8P11142 646 aaKnown RBP18.07■□□□□ 0.48
SHOX-202ENST00000381575 ITGA6P23229 1130 aa18.07■□□□□ 0.48
SHOX-202ENST00000381575 ECE1P42892 770 aa18.07■□□□□ 0.48
SHOX-202ENST00000381575 GGA3Q9NZ52 723 aa18.07■□□□□ 0.48
SHOX-202ENST00000381575 MAP2K1Q02750 393 aaPredicted RBP18.06■□□□□ 0.48
SHOX-202ENST00000381575 RSBN1LQ6PCB5 846 aaPredicted RBP18.06■□□□□ 0.48
SHOX-202ENST00000381575 LINS1Q8NG48 757 aa18.06■□□□□ 0.48
SHOX-202ENST00000381575 MXD3Q9BW11 206 aa18.06■□□□□ 0.48
SHOX-202ENST00000381575 MYH16Q9H6N6 1097 aa18.06■□□□□ 0.48
SHOX-202ENST00000381575 TSKSQ9UJT2 592 aa18.06■□□□□ 0.48
SHOX-202ENST00000381575 CASP8AP2Q9UKL3 1982 aa18.06■□□□□ 0.48
SHOX-202ENST00000381575 KLRK1P26718 216 aa18.05■□□□□ 0.48
SHOX-202ENST00000381575 CCT4P50991 539 aaKnown RBP18.05■□□□□ 0.48
SHOX-202ENST00000381575 TXNRD3Q86VQ6 643 aa18.05■□□□□ 0.48
SHOX-202ENST00000381575 FBXW7Q969H0 707 aa18.05■□□□□ 0.48
SHOX-202ENST00000381575 DCPSQ96C86 337 aaKnown RBP18.05■□□□□ 0.48
SHOX-202ENST00000381575 PRDM10Q9NQV6 1147 aa18.05■□□□□ 0.48
SHOX-202ENST00000381575 MED23Q9ULK4 1368 aa18.05■□□□□ 0.48
SHOX-202ENST00000381575 IGHMBP2P38935 993 aaKnown RBP18.04■□□□□ 0.48
SHOX-202ENST00000381575 PLA2G12BQ9BX93 195 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms