RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 SMC1BQ8NDV3 1235 aa20.31■□□□□ 0.84
SNRPB-201ENST00000381342 IQCA1LA6NCM1 817 aa20.3■□□□□ 0.84
SNRPB-201ENST00000381342 CDC5LQ99459 802 aaKnown RBP20.3■□□□□ 0.84
SNRPB-201ENST00000381342 APLP1P51693 650 aa20.29■□□□□ 0.84
SNRPB-201ENST00000381342 RPS8P62241 208 aaKnown RBP20.29■□□□□ 0.84
SNRPB-201ENST00000381342 ANKRD18AQ8IVF6 992 aa20.29■□□□□ 0.84
SNRPB-201ENST00000381342 MPNDQ8N594 471 aa20.29■□□□□ 0.84
SNRPB-201ENST00000381342 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.29■□□□□ 0.84
SNRPB-201ENST00000381342 LRRFIP2Q9Y608 721 aaKnown RBP20.29■□□□□ 0.84
SNRPB-201ENST00000381342 GNAI3P08754 354 aa20.28■□□□□ 0.84
SNRPB-201ENST00000381342 RABL6Q3YEC7 729 aaPredicted RBP20.28■□□□□ 0.84
SNRPB-201ENST00000381342 C20orf194Q5TEA3 1177 aa20.28■□□□□ 0.84
SNRPB-201ENST00000381342 DPP8Q6V1X1 898 aaPredicted RBP20.28■□□□□ 0.84
SNRPB-201ENST00000381342 VPS33BQ9H267 617 aa20.28■□□□□ 0.84
SNRPB-201ENST00000381342 ANKRD18BA2A2Z9 1011 aa20.27■□□□□ 0.84
SNRPB-201ENST00000381342 PPIP5K2O43314 1243 aa20.27■□□□□ 0.84
SNRPB-201ENST00000381342 MS4A1P11836 297 aa20.27■□□□□ 0.84
SNRPB-201ENST00000381342 IFIT5Q13325 482 aaKnown RBP20.27■□□□□ 0.84
SNRPB-201ENST00000381342 NIM1KQ8IY84 436 aa20.27■□□□□ 0.84
SNRPB-201ENST00000381342 RRP1P56182 461 aaKnown RBP20.26■□□□□ 0.83
SNRPB-201ENST00000381342 COG6Q9Y2V7 657 aa20.26■□□□□ 0.83
SNRPB-201ENST00000381342 FZD9O00144 591 aa20.25■□□□□ 0.83
SNRPB-201ENST00000381342 IGHMBP2P38935 993 aaKnown RBP20.25■□□□□ 0.83
SNRPB-201ENST00000381342 MVPQ14764 893 aaKnown RBP20.25■□□□□ 0.83
SNRPB-201ENST00000381342 CCDC57Q2TAC2 916 aa20.25■□□□□ 0.83
SNRPB-201ENST00000381342 ZNF594Q96JF6 807 aaPredicted RBP20.25■□□□□ 0.83
SNRPB-201ENST00000381342 TAF7LQ5H9L4 462 aa20.24■□□□□ 0.83
SNRPB-201ENST00000381342 GJA3Q9Y6H8 435 aa20.24■□□□□ 0.83
SNRPB-201ENST00000381342 WDR90Q96KV7 1748 aa20.24■□□□□ 0.83
SNRPB-201ENST00000381342 COL4A5P29400 1685 aa20.23■□□□□ 0.83
SNRPB-201ENST00000381342 POTECB2RU33 542 aa20.23■□□□□ 0.83
SNRPB-201ENST00000381342 GPSM2P81274 684 aa20.23■□□□□ 0.83
SNRPB-201ENST00000381342 GPC2Q8N158 579 aa20.23■□□□□ 0.83
SNRPB-201ENST00000381342 L3MBTL3Q96JM7 780 aaPredicted RBP20.23■□□□□ 0.83
SNRPB-201ENST00000381342 C1orf115Q9H7X2 142 aa20.23■□□□□ 0.83
SNRPB-201ENST00000381342 BSDC1Q9NW68 430 aaPredicted RBP20.23■□□□□ 0.83
SNRPB-201ENST00000381342 HACL1Q9UJ83 578 aa20.23■□□□□ 0.83
SNRPB-201ENST00000381342 HDAC5Q9UQL6 1122 aa20.23■□□□□ 0.83
SNRPB-201ENST00000381342 ZNF541Q9H0D2 1346 aa20.23■□□□□ 0.83
SNRPB-201ENST00000381342 ZBTB7BO15156 539 aaPredicted RBP20.22■□□□□ 0.83
SNRPB-201ENST00000381342 GNAI2P04899 355 aa20.22■□□□□ 0.83
SNRPB-201ENST00000381342 LMOD1P29536 600 aaPredicted RBP20.22■□□□□ 0.83
SNRPB-201ENST00000381342 PDE3AQ14432 1141 aa20.22■□□□□ 0.83
SNRPB-201ENST00000381342 AOC3Q16853 763 aa20.22■□□□□ 0.83
SNRPB-201ENST00000381342 MPHOSPH8Q99549 860 aa20.22■□□□□ 0.83
SNRPB-201ENST00000381342 RTFDC1Q9BY42 306 aaPredicted RBP20.22■□□□□ 0.83
SNRPB-201ENST00000381342 NSFL1CQ9UNZ2 370 aaKnown RBP20.22■□□□□ 0.83
SNRPB-201ENST00000381342 KLHDC4Q8TBB5 520 aa20.21■□□□□ 0.83
SNRPB-201ENST00000381342 CLEC11AQ9Y240 323 aa20.21■□□□□ 0.83
SNRPB-201ENST00000381342 EAPPQ56P03 285 aaPredicted RBP20.2■□□□□ 0.82
SNRPB-201ENST00000381342 CHADLQ6NUI6 762 aa20.2■□□□□ 0.82
SNRPB-201ENST00000381342 EYA3Q99504 573 aa20.2■□□□□ 0.82
SNRPB-201ENST00000381342 TAF1DQ9H5J8 278 aaPredicted RBP20.2■□□□□ 0.82
SNRPB-201ENST00000381342 DDX19BQ9UMR2 479 aa20.2■□□□□ 0.82
SNRPB-201ENST00000381342 MINPP1Q9UNW1 487 aa20.2■□□□□ 0.82
SNRPB-201ENST00000381342 C6orf229H3BNL8 230 aa20.19■□□□□ 0.82
SNRPB-201ENST00000381342 RFX5P48382 616 aaPredicted RBP20.19■□□□□ 0.82
SNRPB-201ENST00000381342 PNMA8AQ86V59 439 aaPredicted RBP20.19■□□□□ 0.82
SNRPB-201ENST00000381342 GPR101Q96P66 508 aaPredicted RBP20.19■□□□□ 0.82
SNRPB-201ENST00000381342 ANKIB1Q9P2G1 1089 aa20.19■□□□□ 0.82
SNRPB-201ENST00000381342 ZNRF3Q9ULT6 936 aa20.19■□□□□ 0.82
SNRPB-201ENST00000381342 XDHP47989 1333 aa20.19■□□□□ 0.82
SNRPB-201ENST00000381342 UFL1O94874 794 aa20.18■□□□□ 0.82
SNRPB-201ENST00000381342 EPHX2P34913 555 aa20.18■□□□□ 0.82
SNRPB-201ENST00000381342 KIAA2012Q0VF49 1180 aa20.18■□□□□ 0.82
SNRPB-201ENST00000381342 LDHAL6AQ6ZMR3 332 aa20.18■□□□□ 0.82
SNRPB-201ENST00000381342 LDHDQ86WU2 507 aa20.18■□□□□ 0.82
SNRPB-201ENST00000381342 PUS3Q9BZE2 481 aaKnown RBP20.18■□□□□ 0.82
SNRPB-201ENST00000381342 CNNM1Q9NRU3 951 aa20.18■□□□□ 0.82
SNRPB-201ENST00000381342 PODXL2Q9NZ53 605 aa20.18■□□□□ 0.82
SNRPB-201ENST00000381342 G3V3G9 751 aa20.17■□□□□ 0.82
SNRPB-201ENST00000381342 CHRNDQ07001 517 aa20.17■□□□□ 0.82
SNRPB-201ENST00000381342 MTX1Q13505 466 aa20.17■□□□□ 0.82
SNRPB-201ENST00000381342 WASHC4Q2M389 1173 aa20.17■□□□□ 0.82
SNRPB-201ENST00000381342 DCAF8Q5TAQ9 597 aa20.17■□□□□ 0.82
SNRPB-201ENST00000381342 TBC1D16Q8TBP0 767 aa20.17■□□□□ 0.82
SNRPB-201ENST00000381342 POLLQ9UGP5 575 aa20.17■□□□□ 0.82
SNRPB-201ENST00000381342 PNMA6EA0A0J9YXQ4 647 aa20.16■□□□□ 0.82
SNRPB-201ENST00000381342 WTIPA6NIX2 430 aaPredicted RBP20.16■□□□□ 0.82
SNRPB-201ENST00000381342 SRGAP3O43295 1099 aa20.16■□□□□ 0.82
SNRPB-201ENST00000381342 PTPN12Q05209 780 aaKnown RBP20.16■□□□□ 0.82
SNRPB-201ENST00000381342 TNIP1Q15025 636 aa20.16■□□□□ 0.82
SNRPB-201ENST00000381342 LRRC24Q50LG9 513 aa20.16■□□□□ 0.82
SNRPB-201ENST00000381342 HELBQ8NG08 1087 aaPredicted RBP20.16■□□□□ 0.82
SNRPB-201ENST00000381342 GGA1Q9UJY5 639 aa20.16■□□□□ 0.82
SNRPB-201ENST00000381342 SCN4AP35499 1836 aa20.16■□□□□ 0.82
SNRPB-201ENST00000381342 CIAPIN1Q6FI81 312 aa20.15■□□□□ 0.82
SNRPB-201ENST00000381342 ZC3H12CQ9C0D7 883 aaKnown RBP20.15■□□□□ 0.82
SNRPB-201ENST00000381342 SIL1Q9H173 461 aa20.15■□□□□ 0.82
SNRPB-201ENST00000381342 PA2G4Q9UQ80 394 aaKnown RBP20.15■□□□□ 0.82
SNRPB-201ENST00000381342 ANKRD2Q9GZV1 360 aa20.14■□□□□ 0.81
SNRPB-201ENST00000381342 ZBTB40Q9NUA8 1239 aa20.14■□□□□ 0.81
SNRPB-201ENST00000381342 SUPT16HQ9Y5B9 1047 aaKnown RBP20.14■□□□□ 0.81
SNRPB-201ENST00000381342 RIMBP2O15034 1052 aa20.13■□□□□ 0.81
SNRPB-201ENST00000381342 TAF5LO75529 589 aa20.13■□□□□ 0.81
SNRPB-201ENST00000381342 ATP2B4P23634 1241 aa20.13■□□□□ 0.81
SNRPB-201ENST00000381342 CEP85Q6P2H3 762 aa20.13■□□□□ 0.81
SNRPB-201ENST00000381342 RIPOR2Q9Y4F9 1068 aa20.13■□□□□ 0.81
SNRPB-201ENST00000381342 SNAP23O00161 211 aa20.12■□□□□ 0.81
SNRPB-201ENST00000381342 CXCL9Q07325 125 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms