RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 TSPYL6Q8N831 410 aa16.65■□□□□ 0.26
RPAIN-202ENST00000381208 DPF2Q92785 391 aa16.65■□□□□ 0.26
RPAIN-202ENST00000381208 TSR2Q969E8 191 aaKnown RBP16.65■□□□□ 0.26
RPAIN-202ENST00000381208 ZNF428Q96B54 188 aa16.65■□□□□ 0.26
RPAIN-202ENST00000381208 LRRC37AA6NMS7 1700 aa16.65■□□□□ 0.26
RPAIN-202ENST00000381208 PI4KAP2A4QPH2 592 aa16.64■□□□□ 0.26
RPAIN-202ENST00000381208 GABBR2O75899 941 aa16.64■□□□□ 0.26
RPAIN-202ENST00000381208 RPS12P25398 132 aaKnown RBP16.64■□□□□ 0.26
RPAIN-202ENST00000381208 PI4KAP1Q8N8J0 262 aa16.64■□□□□ 0.26
RPAIN-202ENST00000381208 AIDAQ96BJ3 306 aa16.64■□□□□ 0.26
RPAIN-202ENST00000381208 ZC3H12CQ9C0D7 883 aaKnown RBP16.64■□□□□ 0.26
RPAIN-202ENST00000381208 ABT1Q9ULW3 272 aaKnown RBP16.64■□□□□ 0.26
RPAIN-202ENST00000381208 PRKAR2AP13861 404 aaKnown RBP16.64■□□□□ 0.25
RPAIN-202ENST00000381208 GPSM2P81274 684 aa16.64■□□□□ 0.25
RPAIN-202ENST00000381208 TBC1D16Q8TBP0 767 aa16.64■□□□□ 0.25
RPAIN-202ENST00000381208 CDC5LQ99459 802 aaKnown RBP16.64■□□□□ 0.25
RPAIN-202ENST00000381208 POLLQ9UGP5 575 aa16.64■□□□□ 0.25
RPAIN-202ENST00000381208 PGAP2Q9UHJ9 254 aa16.64■□□□□ 0.25
RPAIN-202ENST00000381208 LTBP1Q14766 1721 aa16.63■□□□□ 0.25
RPAIN-202ENST00000381208 DUOX1Q9NRD9 1551 aa16.63■□□□□ 0.25
RPAIN-202ENST00000381208 YDJCA8MPS7 323 aa16.63■□□□□ 0.25
RPAIN-202ENST00000381208 ECE1P42892 770 aa16.63■□□□□ 0.25
RPAIN-202ENST00000381208 VEGFBP49765 207 aa16.63■□□□□ 0.25
RPAIN-202ENST00000381208 COL13A1Q5TAT6 717 aaPredicted RBP16.63■□□□□ 0.25
RPAIN-202ENST00000381208 ANKRD18AQ8IVF6 992 aa16.63■□□□□ 0.25
RPAIN-202ENST00000381208 ANKIB1Q9P2G1 1089 aa16.63■□□□□ 0.25
RPAIN-202ENST00000381208 CNOT7Q9UIV1 285 aaKnown RBP16.63■□□□□ 0.25
RPAIN-202ENST00000381208 GGA1Q9UJY5 639 aa16.63■□□□□ 0.25
RPAIN-202ENST00000381208 C19orf67A6NJJ6 358 aa16.62■□□□□ 0.25
RPAIN-202ENST00000381208 G3V3G9 751 aa16.62■□□□□ 0.25
RPAIN-202ENST00000381208 DCAF8Q5TAQ9 597 aa16.62■□□□□ 0.25
RPAIN-202ENST00000381208 SEC31BQ9NQW1 1179 aa16.62■□□□□ 0.25
RPAIN-202ENST00000381208 PSMD14O00487 310 aa16.61■□□□□ 0.25
RPAIN-202ENST00000381208 RIMBP2O15034 1052 aa16.61■□□□□ 0.25
RPAIN-202ENST00000381208 ECE2O60344 883 aa16.61■□□□□ 0.25
RPAIN-202ENST00000381208 IGKV5-2P06315 115 aa16.61■□□□□ 0.25
RPAIN-202ENST00000381208 CTSWP56202 376 aa16.61■□□□□ 0.25
RPAIN-202ENST00000381208 MAP2K1Q02750 393 aaPredicted RBP16.61■□□□□ 0.25
RPAIN-202ENST00000381208 CDC37L1Q7L3B6 337 aa16.61■□□□□ 0.25
RPAIN-202ENST00000381208 TNS4Q8IZW8 715 aa16.61■□□□□ 0.25
RPAIN-202ENST00000381208 DBNDD1Q9H9R9 158 aa16.61■□□□□ 0.25
RPAIN-202ENST00000381208 XDHP47989 1333 aa16.61■□□□□ 0.25
RPAIN-202ENST00000381208 NEURL1BA8MQ27 555 aa16.6■□□□□ 0.25
RPAIN-202ENST00000381208 UFL1O94874 794 aa16.6■□□□□ 0.25
RPAIN-202ENST00000381208 FLIIQ13045 1269 aa16.6■□□□□ 0.25
RPAIN-202ENST00000381208 MICALL2Q8IY33 904 aa16.6■□□□□ 0.25
RPAIN-202ENST00000381208 MYH16Q9H6N6 1097 aa16.6■□□□□ 0.25
RPAIN-202ENST00000381208 WDR33Q9C0J8 1336 aaKnown RBP16.6■□□□□ 0.25
RPAIN-202ENST00000381208 FANCIQ9NVI1 1328 aa16.6■□□□□ 0.25
RPAIN-202ENST00000381208 RTL9Q8NET4 1388 aa16.59■□□□□ 0.25
RPAIN-202ENST00000381208 TAF1P21675 1872 aa16.59■□□□□ 0.25
RPAIN-202ENST00000381208 ATP2B4P23634 1241 aa16.59■□□□□ 0.25
RPAIN-202ENST00000381208 CTCFP49711 727 aaPredicted RBP16.59■□□□□ 0.25
RPAIN-202ENST00000381208 PRDM10Q9NQV6 1147 aa16.59■□□□□ 0.25
RPAIN-202ENST00000381208 WBP1LQ9NX94 342 aa16.59■□□□□ 0.25
RPAIN-202ENST00000381208 TLL2Q9Y6L7 1015 aa16.59■□□□□ 0.25
RPAIN-202ENST00000381208 VIL1P09327 827 aaKnown RBP16.58■□□□□ 0.24
RPAIN-202ENST00000381208 FKBP5Q13451 457 aaPredicted RBP16.58■□□□□ 0.24
RPAIN-202ENST00000381208 TTLL11Q8NHH1 800 aa16.58■□□□□ 0.24
RPAIN-202ENST00000381208 DNAAF4Q8WXU2 420 aa16.58■□□□□ 0.24
RPAIN-202ENST00000381208 HHIPL1Q96JK4 782 aa16.58■□□□□ 0.24
RPAIN-202ENST00000381208 PLA2G12BQ9BX93 195 aa16.58■□□□□ 0.24
RPAIN-202ENST00000381208 BSDC1Q9NW68 430 aaPredicted RBP16.58■□□□□ 0.24
RPAIN-202ENST00000381208 H7C1W4 665 aa16.57■□□□□ 0.24
RPAIN-202ENST00000381208 TRAF5O00463 557 aa16.57■□□□□ 0.24
RPAIN-202ENST00000381208 VAMP4O75379 141 aa16.57■□□□□ 0.24
RPAIN-202ENST00000381208 CELF2O95319 508 aaKnown RBP16.57■□□□□ 0.24
RPAIN-202ENST00000381208 HIRAP54198 1017 aaPredicted RBP16.57■□□□□ 0.24
RPAIN-202ENST00000381208 DOK7Q18PE1 504 aa16.57■□□□□ 0.24
RPAIN-202ENST00000381208 CST9Q5W186 159 aa16.57■□□□□ 0.24
RPAIN-202ENST00000381208 PODNQ7Z5L7 613 aa16.57■□□□□ 0.24
RPAIN-202ENST00000381208 LINS1Q8NG48 757 aa16.57■□□□□ 0.24
RPAIN-202ENST00000381208 TRPM4Q8TD43 1214 aa16.57■□□□□ 0.24
RPAIN-202ENST00000381208 JARID2Q92833 1246 aaPredicted RBP16.57■□□□□ 0.24
RPAIN-202ENST00000381208 FOXN1O15353 648 aa16.56■□□□□ 0.24
RPAIN-202ENST00000381208 IGHMBP2P38935 993 aaKnown RBP16.56■□□□□ 0.24
RPAIN-202ENST00000381208 GCKRQ14397 625 aa16.56■□□□□ 0.24
RPAIN-202ENST00000381208 CWF19L2Q2TBE0 894 aaKnown RBP16.56■□□□□ 0.24
RPAIN-202ENST00000381208 PAXIP1Q6ZW49 1069 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-202ENST00000381208 G2E3Q7L622 706 aa16.56■□□□□ 0.24
RPAIN-202ENST00000381208 AGBL3Q8NEM8 1001 aa16.56■□□□□ 0.24
RPAIN-202ENST00000381208 CAPNS2Q96L46 248 aa16.56■□□□□ 0.24
RPAIN-202ENST00000381208 CCDC85AQ96PX6 553 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-202ENST00000381208 ZNF609O15014 1411 aa16.56■□□□□ 0.24
RPAIN-202ENST00000381208 MAP2K2P36507 400 aa16.55■□□□□ 0.24
RPAIN-202ENST00000381208 UBE3BQ7Z3V4 1068 aa16.55■□□□□ 0.24
RPAIN-202ENST00000381208 BEGAINQ9BUH8 593 aa16.55■□□□□ 0.24
RPAIN-202ENST00000381208 GLIS2Q9BZE0 524 aaPredicted RBP16.55■□□□□ 0.24
RPAIN-202ENST00000381208 CACNA1FO60840 1977 aa16.55■□□□□ 0.24
RPAIN-202ENST00000381208 SAPCD2Q86UD0 394 aa16.54■□□□□ 0.24
RPAIN-202ENST00000381208 DCPSQ96C86 337 aaKnown RBP16.54■□□□□ 0.24
RPAIN-202ENST00000381208 GREM2Q9H772 168 aa16.54■□□□□ 0.24
RPAIN-202ENST00000381208 MINPP1Q9UNW1 487 aa16.54■□□□□ 0.24
RPAIN-202ENST00000381208 LEMD3Q9Y2U8 911 aa16.54■□□□□ 0.24
RPAIN-202ENST00000381208 SALL2Q9Y467 1007 aaPredicted RBP16.54■□□□□ 0.24
RPAIN-202ENST00000381208 TRPM7Q96QT4 1865 aa16.54■□□□□ 0.24
RPAIN-202ENST00000381208 MED23Q9ULK4 1368 aa16.53■□□□□ 0.24
RPAIN-202ENST00000381208 MMP14P50281 582 aa16.53■□□□□ 0.24
RPAIN-202ENST00000381208 EXOSC9Q06265 439 aaKnown RBP16.53■□□□□ 0.24
RPAIN-202ENST00000381208 FMR1Q06787 632 aaKnown RBP eCLIP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms