RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 RBM26Q5T8P6 1007 aaKnown RBP20.72■□□□□ 0.91
VCX3A-201ENST00000381089 ZBTB38Q8NAP3 1195 aaPredicted RBP20.72■□□□□ 0.91
VCX3A-201ENST00000381089 TBC1D16Q8TBP0 767 aa20.72■□□□□ 0.91
VCX3A-201ENST00000381089 GBA2Q9HCG7 927 aaPredicted RBP20.72■□□□□ 0.91
VCX3A-201ENST00000381089 ANKIB1Q9P2G1 1089 aa20.72■□□□□ 0.91
VCX3A-201ENST00000381089 CALD1Q05682 793 aaKnown RBP20.71■□□□□ 0.91
VCX3A-201ENST00000381089 RGMBQ6NW40 437 aa20.71■□□□□ 0.91
VCX3A-201ENST00000381089 CCDC102AQ96A19 550 aa20.71■□□□□ 0.91
VCX3A-201ENST00000381089 CHMP4AQ9BY43 222 aa20.71■□□□□ 0.91
VCX3A-201ENST00000381089 MCOLN1Q9GZU1 580 aa20.71■□□□□ 0.91
VCX3A-201ENST00000381089 DDX10Q13206 875 aaKnown RBP20.7■□□□□ 0.9
VCX3A-201ENST00000381089 KIF4BQ2VIQ3 1234 aa20.7■□□□□ 0.9
VCX3A-201ENST00000381089 CCDC152Q4G0S7 254 aa20.7■□□□□ 0.9
VCX3A-201ENST00000381089 SULF1Q8IWU6 871 aa20.7■□□□□ 0.9
VCX3A-201ENST00000381089 MBIPQ9NS73 344 aa20.7■□□□□ 0.9
VCX3A-201ENST00000381089 PODXL2Q9NZ53 605 aa20.7■□□□□ 0.9
VCX3A-201ENST00000381089 GGA1Q9UJY5 639 aa20.7■□□□□ 0.9
VCX3A-201ENST00000381089 ADAMTS8Q9UP79 889 aa20.7■□□□□ 0.9
VCX3A-201ENST00000381089 CASP8AP2Q9UKL3 1982 aa20.69■□□□□ 0.9
VCX3A-201ENST00000381089 UFL1O94874 794 aa20.69■□□□□ 0.9
VCX3A-201ENST00000381089 DGKZQ13574 1117 aa20.69■□□□□ 0.9
VCX3A-201ENST00000381089 RTL9Q8NET4 1388 aa20.69■□□□□ 0.9
VCX3A-201ENST00000381089 VIL1P09327 827 aaKnown RBP20.68■□□□□ 0.9
VCX3A-201ENST00000381089 RGS19P49795 217 aa20.68■□□□□ 0.9
VCX3A-201ENST00000381089 ZNF157P51786 506 aaPredicted RBP20.68■□□□□ 0.9
VCX3A-201ENST00000381089 CCDC191Q8NCU4 936 aa20.68■□□□□ 0.9
VCX3A-201ENST00000381089 SAGE1Q9NXZ1 904 aa20.68■□□□□ 0.9
VCX3A-201ENST00000381089 ADM5C9JUS6 153 aa20.67■□□□□ 0.9
VCX3A-201ENST00000381089 DDX58O95786 925 aaKnown RBP20.67■□□□□ 0.9
VCX3A-201ENST00000381089 EGFRP00533 1210 aa20.67■□□□□ 0.9
VCX3A-201ENST00000381089 GNAI1P63096 354 aa20.67■□□□□ 0.9
VCX3A-201ENST00000381089 MYD88Q99836 296 aa20.67■□□□□ 0.9
VCX3A-201ENST00000381089 KCNQ5Q9NR82 932 aa20.67■□□□□ 0.9
VCX3A-201ENST00000381089 IFT57Q9NWB7 429 aa20.67■□□□□ 0.9
VCX3A-201ENST00000381089 GGA3Q9NZ52 723 aa20.67■□□□□ 0.9
VCX3A-201ENST00000381089 POLR2AP24928 1970 aaKnown RBP20.66■□□□□ 0.9
VCX3A-201ENST00000381089 PDE8AO60658 829 aa20.66■□□□□ 0.9
VCX3A-201ENST00000381089 AGBL3Q8NEM8 1001 aa20.66■□□□□ 0.9
VCX3A-201ENST00000381089 SEC31BQ9NQW1 1179 aa20.66■□□□□ 0.9
VCX3A-201ENST00000381089 CWC25Q9NXE8 425 aaPredicted RBP20.66■□□□□ 0.9
VCX3A-201ENST00000381089 PCCAP05165 728 aaPredicted RBP20.65■□□□□ 0.9
VCX3A-201ENST00000381089 DLK2Q6UY11 383 aa20.65■□□□□ 0.9
VCX3A-201ENST00000381089 ZIC5Q96T25 663 aa20.65■□□□□ 0.9
VCX3A-201ENST00000381089 FAM155AB1AL88 458 aaPredicted RBP20.64■□□□□ 0.89
VCX3A-201ENST00000381089 ZNF853P0CG23 659 aa20.64■□□□□ 0.89
VCX3A-201ENST00000381089 RSBN1LQ6PCB5 846 aaPredicted RBP20.64■□□□□ 0.89
VCX3A-201ENST00000381089 ANKRD18AQ8IVF6 992 aa20.64■□□□□ 0.89
VCX3A-201ENST00000381089 PHAXQ9H814 394 aaKnown RBP20.64■□□□□ 0.89
VCX3A-201ENST00000381089 ZNF609O15014 1411 aa20.63■□□□□ 0.89
VCX3A-201ENST00000381089 XDHP47989 1333 aa20.63■□□□□ 0.89
VCX3A-201ENST00000381089 ZEB1P37275 1124 aaPredicted RBP20.63■□□□□ 0.89
VCX3A-201ENST00000381089 KIF23Q02241 960 aaPredicted RBP20.63■□□□□ 0.89
VCX3A-201ENST00000381089 REM2Q8IYK8 340 aaPredicted RBP20.63■□□□□ 0.89
VCX3A-201ENST00000381089 COL4A1P02462 1669 aa20.63■□□□□ 0.89
VCX3A-201ENST00000381089 ELL2O00472 640 aaPredicted RBP20.62■□□□□ 0.89
VCX3A-201ENST00000381089 ATP2B4P23634 1241 aa20.62■□□□□ 0.89
VCX3A-201ENST00000381089 ZNF280AP59817 542 aaPredicted RBP20.62■□□□□ 0.89
VCX3A-201ENST00000381089 CCDC30Q5VVM6 783 aa20.62■□□□□ 0.89
VCX3A-201ENST00000381089 CDCA5Q96FF9 252 aa20.62■□□□□ 0.89
VCX3A-201ENST00000381089 CDC5LQ99459 802 aaKnown RBP20.62■□□□□ 0.89
VCX3A-201ENST00000381089 SCN9AQ15858 1988 aa20.62■□□□□ 0.89
VCX3A-201ENST00000381089 SLC10A3P09131 477 aa20.61■□□□□ 0.89
VCX3A-201ENST00000381089 USP17L8P0C7I0 530 aa20.61■□□□□ 0.89
VCX3A-201ENST00000381089 FKBP1BP68106 108 aa20.61■□□□□ 0.89
VCX3A-201ENST00000381089 SCARF1Q14162 830 aa20.61■□□□□ 0.89
VCX3A-201ENST00000381089 ANGEL2Q5VTE6 544 aaKnown RBP20.61■□□□□ 0.89
VCX3A-201ENST00000381089 PODNQ7Z5L7 613 aa20.61■□□□□ 0.89
VCX3A-201ENST00000381089 CCDC85AQ96PX6 553 aaPredicted RBP20.61■□□□□ 0.89
VCX3A-201ENST00000381089 METTL22Q9BUU2 404 aaPredicted RBP20.61■□□□□ 0.89
VCX3A-201ENST00000381089 AKAP11Q9UKA4 1901 aa20.61■□□□□ 0.89
VCX3A-201ENST00000381089 APAF1O14727 1248 aa20.6■□□□□ 0.89
VCX3A-201ENST00000381089 TRPA1O75762 1119 aa20.6■□□□□ 0.89
VCX3A-201ENST00000381089 RNF186Q9NXI6 227 aa20.6■□□□□ 0.89
VCX3A-201ENST00000381089 PITPNM2Q9BZ72 1349 aa20.59■□□□□ 0.89
VCX3A-201ENST00000381089 USP17L3A6NCW0 530 aa20.59■□□□□ 0.89
VCX3A-201ENST00000381089 USP17L4A6NCW7 530 aa20.59■□□□□ 0.89
VCX3A-201ENST00000381089 USP17L1Q7RTZ2 530 aa20.59■□□□□ 0.89
VCX3A-201ENST00000381089 MYOZ2Q9NPC6 264 aa20.59■□□□□ 0.89
VCX3A-201ENST00000381089 NEXNQ0ZGT2 675 aa20.58■□□□□ 0.89
VCX3A-201ENST00000381089 PSME4Q14997 1843 aa20.57■□□□□ 0.88
VCX3A-201ENST00000381089 ASTN2O75129 1339 aaPredicted RBP20.57■□□□□ 0.88
VCX3A-201ENST00000381089 SLC34A2O95436 690 aa20.57■□□□□ 0.88
VCX3A-201ENST00000381089 CTSWP56202 376 aa20.57■□□□□ 0.88
VCX3A-201ENST00000381089 JARID2Q92833 1246 aaPredicted RBP20.57■□□□□ 0.88
VCX3A-201ENST00000381089 MAP3K2Q9Y2U5 619 aa20.57■□□□□ 0.88
VCX3A-201ENST00000381089 OGFOD1Q8N543 542 aa20.56■□□□□ 0.88
VCX3A-201ENST00000381089 C8orf58Q8NAV2 365 aa20.56■□□□□ 0.88
VCX3A-201ENST00000381089 CSRNP1Q96S65 589 aa20.56■□□□□ 0.88
VCX3A-201ENST00000381089 STK31Q9BXU1 1019 aa20.56■□□□□ 0.88
VCX3A-201ENST00000381089 PRKRIP1Q9H875 184 aaPredicted RBP20.56■□□□□ 0.88
VCX3A-201ENST00000381089 PAPPA2Q9BXP8 1791 aa20.56■□□□□ 0.88
VCX3A-201ENST00000381089 KSR2Q6VAB6 950 aa20.55■□□□□ 0.88
VCX3A-201ENST00000381089 RASAL3Q86YV0 1011 aa20.55■□□□□ 0.88
VCX3A-201ENST00000381089 GMLQ99445 158 aa20.55■□□□□ 0.88
VCX3A-201ENST00000381089 BSDC1Q9NW68 430 aaPredicted RBP20.55■□□□□ 0.88
VCX3A-201ENST00000381089 MED23Q9ULK4 1368 aa20.55■□□□□ 0.88
VCX3A-201ENST00000381089 MYO3BQ8WXR4 1341 aa20.54■□□□□ 0.88
VCX3A-201ENST00000381089 NF2P35240 595 aa20.53■□□□□ 0.88
VCX3A-201ENST00000381089 MMP14P50281 582 aa20.53■□□□□ 0.88
VCX3A-201ENST00000381089 CTU1Q7Z7A3 348 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms