RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 BIN1O00499 593 aa12.24□□□□□ -0.45
CLCN4-202ENST00000380833 ZNF513Q8N8E2 541 aaPredicted RBP12.24□□□□□ -0.45
CLCN4-202ENST00000380833 SUFUQ9UMX1 484 aa12.24□□□□□ -0.45
CLCN4-202ENST00000380833 N4BP2L2Q92802 583 aaPredicted RBP12.24□□□□□ -0.45
CLCN4-202ENST00000380833 TBC1D31Q96DN5 1066 aa12.24□□□□□ -0.45
CLCN4-202ENST00000380833 FAM170AA1A519 330 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 PPFIA2O75334 1257 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 TSG101Q99816 390 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 NDUFAB1O14561 156 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 DNAJC8O75937 253 aaPredicted RBP12.23□□□□□ -0.45
CLCN4-202ENST00000380833 TSHZ3Q63HK5 1081 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 SLC24A3Q9HC58 644 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 MYO1BO43795 1136 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 HSP90AA4PQ58FG1 418 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 SKAP1Q86WV1 359 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 ABTB1Q969K4 478 aaPredicted RBP12.23□□□□□ -0.45
CLCN4-202ENST00000380833 SYNCQ9H7C4 482 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 CAPN7Q9Y6W3 813 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 SLC5A1P13866 664 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 SMC6Q96SB8 1091 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 STMN4Q9H169 189 aaPredicted RBP12.23□□□□□ -0.45
CLCN4-202ENST00000380833 PKD2L1Q9P0L9 805 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 ODF2LQ9ULJ1 636 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 FGD5Q6ZNL6 1462 aa12.23□□□□□ -0.45
CLCN4-202ENST00000380833 USO1O60763 962 aaKnown RBP12.22□□□□□ -0.45
CLCN4-202ENST00000380833 RRP15Q9Y3B9 282 aaKnown RBP12.22□□□□□ -0.45
CLCN4-202ENST00000380833 IFIT3O14879 490 aaKnown RBP12.22□□□□□ -0.45
CLCN4-202ENST00000380833 ANXA1P04083 346 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 SNCBQ16143 134 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 SPATS2Q86XZ4 545 aaKnown RBP12.22□□□□□ -0.45
CLCN4-202ENST00000380833 RMDN2Q96LZ7 410 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 ZSWIM4Q9H7M6 989 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 SLC12A7Q9Y666 1083 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 TOM1O60784 492 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 SETDB1Q15047 1291 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 ANKRD1Q15327 319 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 EFCAB13Q8IY85 973 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 TAOK3Q9H2K8 898 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 CABP5Q9NP86 173 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.22□□□□□ -0.45
CLCN4-202ENST00000380833 POLD1P28340 1107 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 CCDC155Q8N6L0 562 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 TSPY2A6NKD2 308 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 TAF12Q16514 161 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 RNF10Q8N5U6 811 aaKnown RBP12.22□□□□□ -0.45
CLCN4-202ENST00000380833 CTNNA3Q9UI47 895 aa12.22□□□□□ -0.45
CLCN4-202ENST00000380833 PHACTR2O75167 634 aa12.21□□□□□ -0.45
CLCN4-202ENST00000380833 HOOK3Q86VS8 718 aa12.21□□□□□ -0.45
CLCN4-202ENST00000380833 KLHDC4Q8TBB5 520 aa12.21□□□□□ -0.45
CLCN4-202ENST00000380833 SIRT1Q96EB6 747 aa12.21□□□□□ -0.45
CLCN4-202ENST00000380833 SCAPERQ9BY12 1400 aa12.21□□□□□ -0.45
CLCN4-202ENST00000380833 SKILP12757 684 aa12.21□□□□□ -0.45
CLCN4-202ENST00000380833 NBPF3Q9H094 633 aa12.21□□□□□ -0.45
CLCN4-202ENST00000380833 SSX2IPQ9Y2D8 614 aa12.21□□□□□ -0.45
CLCN4-202ENST00000380833 SYNJ2O15056 1496 aa12.21□□□□□ -0.45
CLCN4-202ENST00000380833 OAS2P29728 719 aaKnown RBP12.21□□□□□ -0.45
CLCN4-202ENST00000380833 COG7P83436 770 aa12.21□□□□□ -0.45
CLCN4-202ENST00000380833 DUSP27Q5VZP5 1158 aa12.21□□□□□ -0.45
CLCN4-202ENST00000380833 NUP88Q99567 741 aaPredicted RBP12.21□□□□□ -0.45
CLCN4-202ENST00000380833 DNAI1Q9UI46 699 aa12.21□□□□□ -0.45
CLCN4-202ENST00000380833 TMEM110-MUSTN1A8MSY1 372 aa12.21□□□□□ -0.46
CLCN4-202ENST00000380833 RIOK3O14730 519 aaKnown RBP12.21□□□□□ -0.46
CLCN4-202ENST00000380833 TAF7Q15545 349 aaPredicted RBP12.21□□□□□ -0.46
CLCN4-202ENST00000380833 RIPOR2Q9Y4F9 1068 aa12.21□□□□□ -0.46
CLCN4-202ENST00000380833 CETN2P41208 172 aa12.21□□□□□ -0.46
CLCN4-202ENST00000380833 PHLDB2Q86SQ0 1253 aa12.21□□□□□ -0.46
CLCN4-202ENST00000380833 SAAL1Q96ER3 474 aa12.21□□□□□ -0.46
CLCN4-202ENST00000380833 CALR3Q96L12 384 aaKnown RBP12.21□□□□□ -0.46
CLCN4-202ENST00000380833 ZNF287Q9HBT7 754 aa12.21□□□□□ -0.46
CLCN4-202ENST00000380833 CCDC194A0A1B0GVG4 234 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 TMC6Q7Z403 805 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 PNISRQ8TF01 805 aaKnown RBP12.2□□□□□ -0.46
CLCN4-202ENST00000380833 TRIM6Q9C030 488 aaPredicted RBP12.2□□□□□ -0.46
CLCN4-202ENST00000380833 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.2□□□□□ -0.46
CLCN4-202ENST00000380833 PSMD7P51665 324 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 ST5P78524 1137 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 ANAPC4Q9UJX5 808 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 GOLGA8AA7E2F4 631 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 GOLGA8BA8MQT2 603 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 MAP3K12Q12852 859 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 NUDT16Q96DE0 195 aaKnown RBP12.2□□□□□ -0.46
CLCN4-202ENST00000380833 NCAPGQ9BPX3 1015 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 STX8Q9UNK0 236 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 CIB2O75838 187 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 NOP2P46087 812 aaKnown RBP12.2□□□□□ -0.46
CLCN4-202ENST00000380833 E2F4Q16254 413 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 ATF7IPQ6VMQ6 1270 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 ALS2CR12Q96Q35 445 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 CTAGE5O15320 804 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 SSFA2P28290 1259 aa12.2□□□□□ -0.46
CLCN4-202ENST00000380833 PDCD2Q16342 344 aaPredicted RBP12.2□□□□□ -0.46
CLCN4-202ENST00000380833 SREK1Q8WXA9 508 aaKnown RBP12.2□□□□□ -0.46
CLCN4-202ENST00000380833 ZWINTO95229 277 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 AMOTQ4VCS5 1084 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 FKBP15Q5T1M5 1219 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 LARSQ9P2J5 1176 aaKnown RBP12.19□□□□□ -0.46
CLCN4-202ENST00000380833 ZNF213O14771 459 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 TMEM266Q2M3C6 531 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 EHBP1Q8NDI1 1231 aa12.19□□□□□ -0.46
CLCN4-202ENST00000380833 BAIAP2L1Q9UHR4 511 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms