RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 CTAGE8P0CG41 777 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 LRMPQ12912 555 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 CTAGE6Q86UF2 777 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 CEP57Q86XR8 500 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 CTAGE4Q8IX94 777 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 SNRKQ9NRH2 765 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 PNMA6EA0A0J9YXQ4 647 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 MYO1BO43795 1136 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 NF2P35240 595 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 KIAA0556O60303 1618 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 NPHP3Q7Z494 1330 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 LDHAL6AQ6ZMR3 332 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 CBX8Q9HC52 389 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 TRPM1Q7Z4N2 1603 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 ATP8B2P98198 1209 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 NMIQ13287 307 aaPredicted RBP4.79□□□□□ -1.64
BRCA2-201ENST00000380152 SMC1AQ14683 1233 aaKnown RBP4.79□□□□□ -1.64
BRCA2-201ENST00000380152 ZNF569Q5MCW4 686 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 OTUD6BQ8N6M0 293 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 MRPS27Q92552 414 aaKnown RBP4.79□□□□□ -1.64
BRCA2-201ENST00000380152 GNL3LQ9NVN8 582 aaKnown RBP4.79□□□□□ -1.64
BRCA2-201ENST00000380152 NUP160Q12769 1436 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 KLF18A0A0U1RQI7 1052 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 PPP2R3AQ06190 1150 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 CDC37L1Q7L3B6 337 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 DNAJC5BQ9UF47 199 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 PIK3R4Q99570 1358 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 A2MP01023 1474 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 EBAG9O00559 213 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 SNX14Q9Y5W7 946 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 ACEP12821 1306 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 SAMD9Q5K651 1589 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 MAATS1Q7Z4T9 603 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 CAPZA3Q96KX2 299 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 SOS1Q07889 1333 aaPredicted RBP4.79□□□□□ -1.64
BRCA2-201ENST00000380152 FANCAO15360 1455 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 A0A1W2PP64 1363 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 GOLGA8AA7E2F4 631 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 KRT86O43790 486 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 MTIF2P46199 727 aaKnown RBP4.79□□□□□ -1.64
BRCA2-201ENST00000380152 STX17P56962 302 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 KIF5AQ12840 1032 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 HDXQ7Z353 690 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.79□□□□□ -1.64
BRCA2-201ENST00000380152 ERO1AQ96HE7 468 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 IMPACTQ9P2X3 320 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 UHRF1BP1Q6BDS2 1440 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 DMTNQ08495 405 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 MAP3K12Q12852 859 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 CWF19L2Q2TBE0 894 aaKnown RBP4.79□□□□□ -1.64
BRCA2-201ENST00000380152 GCOM1H8Y6P7 765 aaPredicted RBP4.79□□□□□ -1.64
BRCA2-201ENST00000380152 POLR2DO15514 142 aaKnown RBP4.79□□□□□ -1.64
BRCA2-201ENST00000380152 ATP2C2O75185 946 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 MYZAPP0CAP1 466 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 STAT6P42226 847 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 UBE4AQ14139 1066 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 MFSD6Q6ZSS7 791 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 PHAXQ9H814 394 aaKnown RBP4.79□□□□□ -1.64
BRCA2-201ENST00000380152 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.79□□□□□ -1.64
BRCA2-201ENST00000380152 SYNMO15061 1565 aa4.79□□□□□ -1.64
BRCA2-201ENST00000380152 CCT6AP40227 531 aaKnown RBP4.78□□□□□ -1.64
BRCA2-201ENST00000380152 CATIPQ7Z7H3 387 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 FAM227BQ96M60 508 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 INCENPQ9NQS7 918 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 ATP10BO94823 1461 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 ABCC1P33527 1531 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 KDM5BQ9UGL1 1544 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 PTPDC1A2A3K4 754 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 ATRIPQ8WXE1 791 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 ALS2CR12Q96Q35 445 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 CARD6Q9BX69 1037 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 TCP11L1Q9NUJ3 509 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 RIMS2Q9UQ26 1411 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 NUP153P49790 1475 aaKnown RBP4.78□□□□□ -1.64
BRCA2-201ENST00000380152 STARD3NLO95772 234 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 PPARDQ03181 441 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 ZRSR2Q15696 482 aaKnown RBP4.78□□□□□ -1.64
BRCA2-201ENST00000380152 AMOTQ4VCS5 1084 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 ZNF608Q9ULD9 1512 aaPredicted RBP4.78□□□□□ -1.64
BRCA2-201ENST00000380152 FBXO31Q5XUX0 539 aaPredicted RBP4.78□□□□□ -1.64
BRCA2-201ENST00000380152 LEO1Q8WVC0 666 aaPredicted RBP4.78□□□□□ -1.64
BRCA2-201ENST00000380152 SEC63Q9UGP8 760 aaKnown RBP4.78□□□□□ -1.64
BRCA2-201ENST00000380152 MAST1Q9Y2H9 1570 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 LRRIQ1Q96JM4 1722 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 FOXO3O43524 673 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 UBA7P41226 1012 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 UBXN1Q04323 297 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 TRIM47Q96LD4 638 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 TCERG1LQ5VWI1 586 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 ANKRD13DQ6ZTN6 518 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 CTCFLQ8NI51 663 aaPredicted RBP4.78□□□□□ -1.64
BRCA2-201ENST00000380152 IFT81Q8WYA0 676 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 SCLT1Q96NL6 688 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 TTC41PQ6P2S7 1318 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 MPHOSPH10O00566 681 aaKnown RBP4.78□□□□□ -1.64
BRCA2-201ENST00000380152 ZBTB43O43298 467 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 EZRP15311 586 aaKnown RBP4.78□□□□□ -1.64
BRCA2-201ENST00000380152 AMPD3Q01432 767 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 ME3Q16798 604 aa4.78□□□□□ -1.64
BRCA2-201ENST00000380152 ERCC6LQ2NKX8 1250 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms