RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 CCDC186Q7Z3E2 898 aa16.46■□□□□ 0.23
SNCAIP-203ENST00000379538 CCDC83Q8IWF9 413 aa16.46■□□□□ 0.23
SNCAIP-203ENST00000379538 SEPT12Q8IYM1 358 aa16.46■□□□□ 0.23
SNCAIP-203ENST00000379538 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.46■□□□□ 0.23
SNCAIP-203ENST00000379538 V9GYY5 206 aaPredicted RBP16.46■□□□□ 0.23
SNCAIP-203ENST00000379538 DOT1LQ8TEK3 1739 aa16.46■□□□□ 0.23
SNCAIP-203ENST00000379538 CACNA1FO60840 1977 aa16.46■□□□□ 0.23
SNCAIP-203ENST00000379538 LETM1O95202 739 aaPredicted RBP16.46■□□□□ 0.23
SNCAIP-203ENST00000379538 GPTP24298 496 aa16.46■□□□□ 0.23
SNCAIP-203ENST00000379538 MAPK8IP2Q13387 824 aaPredicted RBP16.46■□□□□ 0.23
SNCAIP-203ENST00000379538 LINS1Q8NG48 757 aa16.46■□□□□ 0.23
SNCAIP-203ENST00000379538 CCDC85AQ96PX6 553 aaPredicted RBP16.46■□□□□ 0.23
SNCAIP-203ENST00000379538 METTL22Q9BUU2 404 aaPredicted RBP16.46■□□□□ 0.23
SNCAIP-203ENST00000379538 BICC1Q9H694 974 aaKnown RBP16.45■□□□□ 0.22
SNCAIP-203ENST00000379538 DIAPH3Q9NSV4 1193 aa16.45■□□□□ 0.22
SNCAIP-203ENST00000379538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.45■□□□□ 0.22
SNCAIP-203ENST00000379538 LOC102724428A0A0B4J2F2 783 aa16.45■□□□□ 0.22
SNCAIP-203ENST00000379538 VPS37CA5D8V6 355 aaPredicted RBP16.45■□□□□ 0.22
SNCAIP-203ENST00000379538 GRM8O00222 908 aa16.45■□□□□ 0.22
SNCAIP-203ENST00000379538 CTIFO43310 598 aaKnown RBP16.45■□□□□ 0.22
SNCAIP-203ENST00000379538 SIK1P57059 783 aa16.45■□□□□ 0.22
SNCAIP-203ENST00000379538 ANAPC15P60006 121 aa16.45■□□□□ 0.22
SNCAIP-203ENST00000379538 TMEM87AQ8NBN3 555 aa16.45■□□□□ 0.22
SNCAIP-203ENST00000379538 SNX14Q9Y5W7 946 aa16.45■□□□□ 0.22
SNCAIP-203ENST00000379538 HSPA4P34932 840 aa16.44■□□□□ 0.22
SNCAIP-203ENST00000379538 GCKRQ14397 625 aa16.44■□□□□ 0.22
SNCAIP-203ENST00000379538 ZNF592Q92610 1267 aa16.44■□□□□ 0.22
SNCAIP-203ENST00000379538 SIL1Q9H173 461 aa16.44■□□□□ 0.22
SNCAIP-203ENST00000379538 A0A087WZG4 1122 aa16.44■□□□□ 0.22
SNCAIP-203ENST00000379538 VGLL3A8MV65 326 aa16.44■□□□□ 0.22
SNCAIP-203ENST00000379538 GTF2E1P29083 439 aaPredicted RBP16.44■□□□□ 0.22
SNCAIP-203ENST00000379538 ATP8B2P98198 1209 aa16.44■□□□□ 0.22
SNCAIP-203ENST00000379538 NEXNQ0ZGT2 675 aa16.44■□□□□ 0.22
SNCAIP-203ENST00000379538 SMC3Q9UQE7 1217 aa16.44■□□□□ 0.22
SNCAIP-203ENST00000379538 STARD3NLO95772 234 aa16.43■□□□□ 0.22
SNCAIP-203ENST00000379538 DRC7Q8IY82 874 aa16.43■□□□□ 0.22
SNCAIP-203ENST00000379538 NECAB1Q8N987 351 aa16.43■□□□□ 0.22
SNCAIP-203ENST00000379538 SURF6O75683 361 aaKnown RBP16.43■□□□□ 0.22
SNCAIP-203ENST00000379538 LIG1P18858 919 aa16.43■□□□□ 0.22
SNCAIP-203ENST00000379538 GJB2P29033 226 aa16.43■□□□□ 0.22
SNCAIP-203ENST00000379538 CWC27Q6UX04 472 aaKnown RBP16.43■□□□□ 0.22
SNCAIP-203ENST00000379538 PLBD2Q8NHP8 589 aa16.43■□□□□ 0.22
SNCAIP-203ENST00000379538 PALLDQ8WX93 1383 aa16.42■□□□□ 0.22
SNCAIP-203ENST00000379538 ADCK5Q3MIX3 580 aa16.42■□□□□ 0.22
SNCAIP-203ENST00000379538 CHMP4AQ9BY43 222 aa16.42■□□□□ 0.22
SNCAIP-203ENST00000379538 CTNNA3Q9UI47 895 aa16.42■□□□□ 0.22
SNCAIP-203ENST00000379538 UBR2Q8IWV8 1755 aa16.42■□□□□ 0.22
SNCAIP-203ENST00000379538 CASTP20810 708 aaKnown RBP16.41■□□□□ 0.22
SNCAIP-203ENST00000379538 CRKLP46109 303 aaKnown RBP16.41■□□□□ 0.22
SNCAIP-203ENST00000379538 ARID5BQ14865 1188 aa16.41■□□□□ 0.22
SNCAIP-203ENST00000379538 TTC14Q96N46 770 aa16.41■□□□□ 0.22
SNCAIP-203ENST00000379538 TRPC5Q9UL62 973 aaPredicted RBP16.41■□□□□ 0.22
SNCAIP-203ENST00000379538 AMIGO3Q86WK7 504 aa16.41■□□□□ 0.22
SNCAIP-203ENST00000379538 FAM89AQ96GI7 184 aa16.41■□□□□ 0.22
SNCAIP-203ENST00000379538 MTMR6Q9Y217 621 aa16.41■□□□□ 0.22
SNCAIP-203ENST00000379538 THSD7AQ9UPZ6 1657 aa16.41■□□□□ 0.22
SNCAIP-203ENST00000379538 NPHP1O15259 732 aa16.4■□□□□ 0.22
SNCAIP-203ENST00000379538 TNNT1P13805 278 aa16.4■□□□□ 0.22
SNCAIP-203ENST00000379538 INTS5Q6P9B9 1019 aaKnown RBP16.4■□□□□ 0.22
SNCAIP-203ENST00000379538 TTC6Q86TZ1 520 aa16.4■□□□□ 0.22
SNCAIP-203ENST00000379538 TCEANC2Q96MN5 208 aa16.4■□□□□ 0.22
SNCAIP-203ENST00000379538 ST7Q9NRC1 585 aa16.4■□□□□ 0.22
SNCAIP-203ENST00000379538 TFIP11Q9UBB9 837 aaKnown RBP16.4■□□□□ 0.22
SNCAIP-203ENST00000379538 MRVI1Q9Y6F6 885 aa16.4■□□□□ 0.22
SNCAIP-203ENST00000379538 ALDH1L1O75891 902 aa16.39■□□□□ 0.22
SNCAIP-203ENST00000379538 ST3GAL1Q11201 340 aa16.39■□□□□ 0.22
SNCAIP-203ENST00000379538 LIMCH1Q9UPQ0 1083 aa16.39■□□□□ 0.22
SNCAIP-203ENST00000379538 PAPPAQ13219 1627 aa16.39■□□□□ 0.21
SNCAIP-203ENST00000379538 USP27XA6NNY8 438 aa16.39■□□□□ 0.21
SNCAIP-203ENST00000379538 TMEM51Q9NW97 253 aa16.39■□□□□ 0.21
SNCAIP-203ENST00000379538 A0A087WWV3 80 aa16.38■□□□□ 0.21
SNCAIP-203ENST00000379538 CCDC192P0DO97 292 aa16.38■□□□□ 0.21
SNCAIP-203ENST00000379538 CCDC144BQ3MJ40 725 aa16.38■□□□□ 0.21
SNCAIP-203ENST00000379538 ANO6Q4KMQ2 910 aa16.38■□□□□ 0.21
SNCAIP-203ENST00000379538 CCDC144CPQ8IYA2 1237 aa16.38■□□□□ 0.21
SNCAIP-203ENST00000379538 LINC00116Q8NCU8 138 aa16.38■□□□□ 0.21
SNCAIP-203ENST00000379538 TRIM5Q9C035 493 aa16.38■□□□□ 0.21
SNCAIP-203ENST00000379538 PXDNLA1KZ92 1463 aa16.38■□□□□ 0.21
SNCAIP-203ENST00000379538 TYRO3Q06418 890 aa16.38■□□□□ 0.21
SNCAIP-203ENST00000379538 SSH3Q8TE77 659 aa16.38■□□□□ 0.21
SNCAIP-203ENST00000379538 LSG1Q9H089 658 aaKnown RBP16.38■□□□□ 0.21
SNCAIP-203ENST00000379538 OGFRQ9NZT2 677 aa16.38■□□□□ 0.21
SNCAIP-203ENST00000379538 ATRNO75882 1429 aa16.38■□□□□ 0.21
SNCAIP-203ENST00000379538 CACTINQ8WUQ7 758 aaKnown RBP16.37■□□□□ 0.21
SNCAIP-203ENST00000379538 SGSM2O43147 1006 aa16.37■□□□□ 0.21
SNCAIP-203ENST00000379538 SLFN14P0C7P3 912 aa16.37■□□□□ 0.21
SNCAIP-203ENST00000379538 PTH1RQ03431 593 aa16.37■□□□□ 0.21
SNCAIP-203ENST00000379538 DZIP3Q86Y13 1208 aaKnown RBP16.37■□□□□ 0.21
SNCAIP-203ENST00000379538 FAM200AQ8TCP9 573 aa16.37■□□□□ 0.21
SNCAIP-203ENST00000379538 CBX8Q9HC52 389 aa16.37■□□□□ 0.21
SNCAIP-203ENST00000379538 DACT1Q9NYF0 836 aa16.37■□□□□ 0.21
SNCAIP-203ENST00000379538 RAD50Q92878 1312 aa16.37■□□□□ 0.21
SNCAIP-203ENST00000379538 ERICH4A6NGS2 130 aa16.36■□□□□ 0.21
SNCAIP-203ENST00000379538 TRIM37O94972 964 aa16.36■□□□□ 0.21
SNCAIP-203ENST00000379538 OS9Q13438 667 aaPredicted RBP16.36■□□□□ 0.21
SNCAIP-203ENST00000379538 ZSCAN25Q6NSZ9 544 aa16.36■□□□□ 0.21
SNCAIP-203ENST00000379538 CDC37L1Q7L3B6 337 aa16.36■□□□□ 0.21
SNCAIP-203ENST00000379538 ME3Q16798 604 aa16.36■□□□□ 0.21
SNCAIP-203ENST00000379538 JAKMIP1Q96N16 626 aaKnown RBP16.36■□□□□ 0.21
SNCAIP-203ENST00000379538 GOLGA6L6A8MZA4 724 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms