RNA–Protein interactions for RNA: ENST00000379500.6

CMTM1-205, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CMTM1, Length 1,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-205ENST00000379500 PNMA6EA0A0J9YXQ4 647 aa17.47■□□□□ 0.39
CMTM1-205ENST00000379500 EYA2O00167 538 aa17.47■□□□□ 0.39
CMTM1-205ENST00000379500 IL15P40933 162 aaPredicted RBP17.47■□□□□ 0.39
CMTM1-205ENST00000379500 RFX5P48382 616 aaPredicted RBP17.47■□□□□ 0.39
CMTM1-205ENST00000379500 IRX6P78412 446 aaPredicted RBP17.47■□□□□ 0.39
CMTM1-205ENST00000379500 PTPN12Q05209 780 aaKnown RBP17.47■□□□□ 0.39
CMTM1-205ENST00000379500 POLA2Q14181 598 aa17.47■□□□□ 0.39
CMTM1-205ENST00000379500 ARHGAP27Q6ZUM4 889 aa17.47■□□□□ 0.39
CMTM1-205ENST00000379500 MINPP1Q9UNW1 487 aa17.47■□□□□ 0.39
CMTM1-205ENST00000379500 NSFL1CQ9UNZ2 370 aaKnown RBP17.47■□□□□ 0.39
CMTM1-205ENST00000379500 GOLGB1Q14789 3259 aaKnown RBP17.47■□□□□ 0.39
CMTM1-205ENST00000379500 XDHP47989 1333 aa17.47■□□□□ 0.39
CMTM1-205ENST00000379500 KCNJ4P48050 445 aa17.46■□□□□ 0.39
CMTM1-205ENST00000379500 OS9Q13438 667 aaPredicted RBP17.46■□□□□ 0.39
CMTM1-205ENST00000379500 TAOK3Q9H2K8 898 aa17.46■□□□□ 0.39
CMTM1-205ENST00000379500 SPEF2Q9C093 1822 aa17.46■□□□□ 0.39
CMTM1-205ENST00000379500 SURF6O75683 361 aaKnown RBP17.45■□□□□ 0.38
CMTM1-205ENST00000379500 YBX3P16989 372 aaKnown RBP eCLIP17.45■□□□□ 0.38
CMTM1-205ENST00000379500 ATP2B4P23634 1241 aa17.45■□□□□ 0.38
CMTM1-205ENST00000379500 METTL24Q5JXM2 366 aa17.45■□□□□ 0.38
CMTM1-205ENST00000379500 ERC1Q8IUD2 1116 aa17.45■□□□□ 0.38
CMTM1-205ENST00000379500 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
CMTM1-205ENST00000379500 PSMD1Q99460 953 aa17.45■□□□□ 0.38
CMTM1-205ENST00000379500 SIL1Q9H173 461 aa17.45■□□□□ 0.38
CMTM1-205ENST00000379500 PODXL2Q9NZ53 605 aa17.45■□□□□ 0.38
CMTM1-205ENST00000379500 GGA1Q9UJY5 639 aa17.45■□□□□ 0.38
CMTM1-205ENST00000379500 FKBP4Q02790 459 aaKnown RBP eCLIP17.44■□□□□ 0.38
CMTM1-205ENST00000379500 CHRNDQ07001 517 aa17.44■□□□□ 0.38
CMTM1-205ENST00000379500 EYA3Q99504 573 aa17.44■□□□□ 0.38
CMTM1-205ENST00000379500 VPS33BQ9H267 617 aa17.44■□□□□ 0.38
CMTM1-205ENST00000379500 CEP126Q9P2H0 1117 aa17.44■□□□□ 0.38
CMTM1-205ENST00000379500 LEMD3Q9Y2U8 911 aa17.44■□□□□ 0.38
CMTM1-205ENST00000379500 RIPOR2Q9Y4F9 1068 aa17.44■□□□□ 0.38
CMTM1-205ENST00000379500 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
CMTM1-205ENST00000379500 LRRC37AA6NMS7 1700 aa17.44■□□□□ 0.38
CMTM1-205ENST00000379500 C6orf229H3BNL8 230 aa17.43■□□□□ 0.38
CMTM1-205ENST00000379500 GPSM2P81274 684 aa17.43■□□□□ 0.38
CMTM1-205ENST00000379500 RWDD1Q9H446 243 aaPredicted RBP17.43■□□□□ 0.38
CMTM1-205ENST00000379500 PA2G4Q9UQ80 394 aaKnown RBP17.43■□□□□ 0.38
CMTM1-205ENST00000379500 NOP58Q9Y2X3 529 aaKnown RBP17.43■□□□□ 0.38
CMTM1-205ENST00000379500 UFL1O94874 794 aa17.42■□□□□ 0.38
CMTM1-205ENST00000379500 LRRC24Q50LG9 513 aa17.42■□□□□ 0.38
CMTM1-205ENST00000379500 OLFM4Q6UX06 510 aa17.42■□□□□ 0.38
CMTM1-205ENST00000379500 RTFDC1Q9BY42 306 aaPredicted RBP17.42■□□□□ 0.38
CMTM1-205ENST00000379500 PUS3Q9BZE2 481 aaKnown RBP17.42■□□□□ 0.38
CMTM1-205ENST00000379500 AKAP2Q9Y2D5 859 aa17.42■□□□□ 0.38
CMTM1-205ENST00000379500 PCDHB15Q9Y5E8 787 aa17.42■□□□□ 0.38
CMTM1-205ENST00000379500 RAB11FIP3O75154 756 aa17.41■□□□□ 0.38
CMTM1-205ENST00000379500 ERICH6BQ5W0A0 696 aa17.41■□□□□ 0.38
CMTM1-205ENST00000379500 SIRT2Q8IXJ6 389 aa17.41■□□□□ 0.38
CMTM1-205ENST00000379500 FER1L6Q2WGJ9 1857 aa17.41■□□□□ 0.38
CMTM1-205ENST00000379500 PDE8BO95263 885 aa17.4■□□□□ 0.38
CMTM1-205ENST00000379500 LMNB1P20700 586 aa17.4■□□□□ 0.38
CMTM1-205ENST00000379500 HDAC1Q13547 482 aaPredicted RBP17.4■□□□□ 0.38
CMTM1-205ENST00000379500 UBE4AQ14139 1066 aa17.4■□□□□ 0.38
CMTM1-205ENST00000379500 PUM3Q15397 648 aaKnown RBP17.4■□□□□ 0.38
CMTM1-205ENST00000379500 ATG9AQ7Z3C6 839 aa17.4■□□□□ 0.38
CMTM1-205ENST00000379500 TBC1D16Q8TBP0 767 aa17.4■□□□□ 0.38
CMTM1-205ENST00000379500 ZC3H12CQ9C0D7 883 aaKnown RBP17.4■□□□□ 0.38
CMTM1-205ENST00000379500 ZBTB47Q9UFB7 747 aaPredicted RBP17.4■□□□□ 0.38
CMTM1-205ENST00000379500 ZNF804BA4D1E1 1349 aa17.4■□□□□ 0.38
CMTM1-205ENST00000379500 COL4A1P02462 1669 aa17.39■□□□□ 0.37
CMTM1-205ENST00000379500 G3V3G9 751 aa17.39■□□□□ 0.37
CMTM1-205ENST00000379500 NFKBIEO00221 500 aa17.39■□□□□ 0.37
CMTM1-205ENST00000379500 WASHC4Q2M389 1173 aa17.39■□□□□ 0.37
CMTM1-205ENST00000379500 DCAF8Q5TAQ9 597 aa17.39■□□□□ 0.37
CMTM1-205ENST00000379500 HELBQ8NG08 1087 aaPredicted RBP17.39■□□□□ 0.37
CMTM1-205ENST00000379500 TAF5LO75529 589 aa17.38■□□□□ 0.37
CMTM1-205ENST00000379500 IFIT1P09914 478 aaKnown RBP17.38■□□□□ 0.37
CMTM1-205ENST00000379500 SLC5A1P13866 664 aa17.38■□□□□ 0.37
CMTM1-205ENST00000379500 JDP2Q8WYK2 163 aa17.38■□□□□ 0.37
CMTM1-205ENST00000379500 KIF1BPQ96EK5 621 aa17.38■□□□□ 0.37
CMTM1-205ENST00000379500 POLLQ9UGP5 575 aa17.38■□□□□ 0.37
CMTM1-205ENST00000379500 EXOC6BQ9Y2D4 811 aa17.38■□□□□ 0.37
CMTM1-205ENST00000379500 PPIP5K2O43314 1243 aa17.37■□□□□ 0.37
CMTM1-205ENST00000379500 IARSP41252 1262 aaKnown RBP17.37■□□□□ 0.37
CMTM1-205ENST00000379500 LARGE2Q8N3Y3 721 aa17.37■□□□□ 0.37
CMTM1-205ENST00000379500 LPIN2Q92539 896 aa17.37■□□□□ 0.37
CMTM1-205ENST00000379500 GCC1Q96CN9 775 aa17.37■□□□□ 0.37
CMTM1-205ENST00000379500 DCTPP1Q9H773 170 aa17.37■□□□□ 0.37
CMTM1-205ENST00000379500 ZNF277Q9NRM2 450 aaPredicted RBP17.37■□□□□ 0.37
CMTM1-205ENST00000379500 SNED1Q8TER0 1413 aa17.37■□□□□ 0.37
CMTM1-205ENST00000379500 RASSF7Q02833 373 aa17.36■□□□□ 0.37
CMTM1-205ENST00000379500 KIAA2012Q0VF49 1180 aa17.36■□□□□ 0.37
CMTM1-205ENST00000379500 TFCP2Q12800 502 aa17.36■□□□□ 0.37
CMTM1-205ENST00000379500 ATP2B3Q16720 1220 aa17.36■□□□□ 0.37
CMTM1-205ENST00000379500 CAVIN4Q5BKX8 364 aa17.36■□□□□ 0.37
CMTM1-205ENST00000379500 VGLL2Q8N8G2 317 aa17.36■□□□□ 0.37
CMTM1-205ENST00000379500 GPR108Q9NPR9 543 aa17.36■□□□□ 0.37
CMTM1-205ENST00000379500 MED23Q9ULK4 1368 aa17.36■□□□□ 0.37
CMTM1-205ENST00000379500 C15orf52Q6ZUT6 534 aaKnown RBP17.35■□□□□ 0.37
CMTM1-205ENST00000379500 ZNF804AQ7Z570 1209 aa17.35■□□□□ 0.37
CMTM1-205ENST00000379500 VPS37DQ86XT2 251 aa17.35■□□□□ 0.37
CMTM1-205ENST00000379500 NIM1KQ8IY84 436 aa17.35■□□□□ 0.37
CMTM1-205ENST00000379500 CLASRPQ8N2M8 674 aaKnown RBP17.35■□□□□ 0.37
CMTM1-205ENST00000379500 LRRCC1Q9C099 1032 aa17.35■□□□□ 0.37
CMTM1-205ENST00000379500 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
CMTM1-205ENST00000379500 A0A1B0GUL6 1792 aa17.34■□□□□ 0.37
CMTM1-205ENST00000379500 APBB1O00213 710 aa17.34■□□□□ 0.37
CMTM1-205ENST00000379500 RIMBP2O15034 1052 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms