RNA–Protein interactions for RNA: ENST00000378389.5

PRDM16-202, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-202ENST00000378389 MYD88Q99836 296 aa24.79■■□□□ 1.56
PRDM16-202ENST00000378389 CWC25Q9NXE8 425 aaPredicted RBP24.79■■□□□ 1.56
PRDM16-202ENST00000378389 ZBTB12Q9Y330 459 aaPredicted RBP24.79■■□□□ 1.56
PRDM16-202ENST00000378389 DDX58O95786 925 aaKnown RBP24.78■■□□□ 1.56
PRDM16-202ENST00000378389 CCDC152Q4G0S7 254 aa24.78■■□□□ 1.56
PRDM16-202ENST00000378389 NCBP3Q53F19 620 aaKnown RBP24.78■■□□□ 1.56
PRDM16-202ENST00000378389 SEC31BQ9NQW1 1179 aa24.78■■□□□ 1.56
PRDM16-202ENST00000378389 ELL2O00472 640 aaPredicted RBP24.77■■□□□ 1.56
PRDM16-202ENST00000378389 VIL1P09327 827 aaKnown RBP24.77■■□□□ 1.56
PRDM16-202ENST00000378389 RIMBP2O15034 1052 aa24.75■■□□□ 1.55
PRDM16-202ENST00000378389 CA12O43570 354 aa24.75■■□□□ 1.55
PRDM16-202ENST00000378389 TSPYL6Q8N831 410 aa24.75■■□□□ 1.55
PRDM16-202ENST00000378389 ZC3H12CQ9C0D7 883 aaKnown RBP24.75■■□□□ 1.55
PRDM16-202ENST00000378389 BRPF1P55201 1214 aaPredicted RBP24.74■■□□□ 1.55
PRDM16-202ENST00000378389 KSR2Q6VAB6 950 aa24.74■■□□□ 1.55
PRDM16-202ENST00000378389 PAXIP1Q6ZW49 1069 aaPredicted RBP24.74■■□□□ 1.55
PRDM16-202ENST00000378389 SAMD7Q7Z3H4 446 aa24.74■■□□□ 1.55
PRDM16-202ENST00000378389 KCNQ5Q9NR82 932 aa24.74■■□□□ 1.55
PRDM16-202ENST00000378389 GGA1Q9UJY5 639 aa24.74■■□□□ 1.55
PRDM16-202ENST00000378389 MYH3P11055 1940 aa24.74■■□□□ 1.55
PRDM16-202ENST00000378389 POLR2AP24928 1970 aaKnown RBP24.74■■□□□ 1.55
PRDM16-202ENST00000378389 AOC2O75106 756 aa24.73■■□□□ 1.55
PRDM16-202ENST00000378389 EGFRP00533 1210 aa24.73■■□□□ 1.55
PRDM16-202ENST00000378389 IGKV5-2P06315 115 aa24.73■■□□□ 1.55
PRDM16-202ENST00000378389 DOK7Q18PE1 504 aa24.73■■□□□ 1.55
PRDM16-202ENST00000378389 BEGAINQ9BUH8 593 aa24.73■■□□□ 1.55
PRDM16-202ENST00000378389 MAP3K2Q9Y2U5 619 aa24.73■■□□□ 1.55
PRDM16-202ENST00000378389 XDHP47989 1333 aa24.72■■□□□ 1.55
PRDM16-202ENST00000378389 IL16Q14005 1332 aa24.72■■□□□ 1.55
PRDM16-202ENST00000378389 UFL1O94874 794 aa24.72■■□□□ 1.55
PRDM16-202ENST00000378389 USP48Q86UV5 1035 aa24.72■■□□□ 1.55
PRDM16-202ENST00000378389 ZNF280AP59817 542 aaPredicted RBP24.71■■□□□ 1.55
PRDM16-202ENST00000378389 TBC1D10BQ4KMP7 808 aaPredicted RBP24.71■■□□□ 1.55
PRDM16-202ENST00000378389 CTSWP56202 376 aa24.7■■□□□ 1.54
PRDM16-202ENST00000378389 KRT26Q7Z3Y9 468 aa24.7■■□□□ 1.54
PRDM16-202ENST00000378389 ANKRD18AQ8IVF6 992 aa24.7■■□□□ 1.54
PRDM16-202ENST00000378389 WWC1Q8IX03 1113 aa24.7■■□□□ 1.54
PRDM16-202ENST00000378389 AGBL3Q8NEM8 1001 aa24.7■■□□□ 1.54
PRDM16-202ENST00000378389 GMLQ99445 158 aa24.7■■□□□ 1.54
PRDM16-202ENST00000378389 ANKIB1Q9P2G1 1089 aa24.7■■□□□ 1.54
PRDM16-202ENST00000378389 PI4KAP2A4QPH2 592 aa24.69■■□□□ 1.54
PRDM16-202ENST00000378389 NOGQ13253 232 aa24.69■■□□□ 1.54
PRDM16-202ENST00000378389 PI4KAP1Q8N8J0 262 aa24.69■■□□□ 1.54
PRDM16-202ENST00000378389 CACNA1FO60840 1977 aa24.69■■□□□ 1.54
PRDM16-202ENST00000378389 ATP2B4P23634 1241 aa24.68■■□□□ 1.54
PRDM16-202ENST00000378389 GRM1Q13255 1194 aa24.68■■□□□ 1.54
PRDM16-202ENST00000378389 KIF4BQ2VIQ3 1234 aa24.68■■□□□ 1.54
PRDM16-202ENST00000378389 CCDC184Q52MB2 194 aa24.68■■□□□ 1.54
PRDM16-202ENST00000378389 RSBN1LQ6PCB5 846 aaPredicted RBP24.68■■□□□ 1.54
PRDM16-202ENST00000378389 TTLL11Q8NHH1 800 aa24.68■■□□□ 1.54
PRDM16-202ENST00000378389 ABHD8Q96I13 439 aa24.68■■□□□ 1.54
PRDM16-202ENST00000378389 CDC5LQ99459 802 aaKnown RBP24.68■■□□□ 1.54
PRDM16-202ENST00000378389 ZNF408Q9H9D4 720 aa24.68■■□□□ 1.54
PRDM16-202ENST00000378389 ZNF646O15015 1829 aaPredicted RBP24.68■■□□□ 1.54
PRDM16-202ENST00000378389 JARID2Q92833 1246 aaPredicted RBP24.67■■□□□ 1.54
PRDM16-202ENST00000378389 TSR2Q969E8 191 aaKnown RBP24.67■■□□□ 1.54
PRDM16-202ENST00000378389 DCPSQ96C86 337 aaKnown RBP24.67■■□□□ 1.54
PRDM16-202ENST00000378389 BSDC1Q9NW68 430 aaPredicted RBP24.67■■□□□ 1.54
PRDM16-202ENST00000378389 MED23Q9ULK4 1368 aa24.67■■□□□ 1.54
PRDM16-202ENST00000378389 NEURL1BA8MQ27 555 aa24.66■■□□□ 1.54
PRDM16-202ENST00000378389 HUNKP57058 714 aa24.66■■□□□ 1.54
PRDM16-202ENST00000378389 PODNQ7Z5L7 613 aa24.66■■□□□ 1.54
PRDM16-202ENST00000378389 STK31Q9BXU1 1019 aa24.66■■□□□ 1.54
PRDM16-202ENST00000378389 GBA2Q9HCG7 927 aaPredicted RBP24.66■■□□□ 1.54
PRDM16-202ENST00000378389 FAM155AB1AL88 458 aaPredicted RBP24.65■■□□□ 1.54
PRDM16-202ENST00000378389 H7C1W4 665 aa24.65■■□□□ 1.54
PRDM16-202ENST00000378389 NEXNQ0ZGT2 675 aa24.65■■□□□ 1.54
PRDM16-202ENST00000378389 TWISTNBQ3B726 338 aaPredicted RBP24.65■■□□□ 1.54
PRDM16-202ENST00000378389 DLK2Q6UY11 383 aa24.65■■□□□ 1.54
PRDM16-202ENST00000378389 PLA2G12BQ9BX93 195 aa24.65■■□□□ 1.54
PRDM16-202ENST00000378389 ADM5C9JUS6 153 aa24.64■■□□□ 1.54
PRDM16-202ENST00000378389 GGA3Q9NZ52 723 aa24.64■■□□□ 1.54
PRDM16-202ENST00000378389 MINPP1Q9UNW1 487 aa24.64■■□□□ 1.54
PRDM16-202ENST00000378389 PITPNM2Q9BZ72 1349 aa24.63■■□□□ 1.53
PRDM16-202ENST00000378389 RGMBQ6NW40 437 aa24.63■■□□□ 1.53
PRDM16-202ENST00000378389 C2orf69Q8N8R5 385 aa24.63■■□□□ 1.53
PRDM16-202ENST00000378389 CCDC85AQ96PX6 553 aaPredicted RBP24.63■■□□□ 1.53
PRDM16-202ENST00000378389 GREM2Q9H772 168 aa24.63■■□□□ 1.53
PRDM16-202ENST00000378389 G3V3G9 751 aa24.62■■□□□ 1.53
PRDM16-202ENST00000378389 CWF19L2Q2TBE0 894 aaKnown RBP24.62■■□□□ 1.53
PRDM16-202ENST00000378389 RBM26Q5T8P6 1007 aaKnown RBP24.62■■□□□ 1.53
PRDM16-202ENST00000378389 DCAF8Q5TAQ9 597 aa24.62■■□□□ 1.53
PRDM16-202ENST00000378389 G2E3Q7L622 706 aa24.62■■□□□ 1.53
PRDM16-202ENST00000378389 SULF1Q8IWU6 871 aa24.62■■□□□ 1.53
PRDM16-202ENST00000378389 SPEF2Q9C093 1822 aa24.61■■□□□ 1.53
PRDM16-202ENST00000378389 USP17L3A6NCW0 530 aa24.61■■□□□ 1.53
PRDM16-202ENST00000378389 USP17L4A6NCW7 530 aa24.61■■□□□ 1.53
PRDM16-202ENST00000378389 CASP7P55210 303 aa24.61■■□□□ 1.53
PRDM16-202ENST00000378389 USP17L1Q7RTZ2 530 aa24.61■■□□□ 1.53
PRDM16-202ENST00000378389 CCDC102AQ96A19 550 aa24.61■■□□□ 1.53
PRDM16-202ENST00000378389 ZIC5Q96T25 663 aa24.61■■□□□ 1.53
PRDM16-202ENST00000378389 ASTN2O75129 1339 aaPredicted RBP24.61■■□□□ 1.53
PRDM16-202ENST00000378389 SLC4A2P04920 1241 aa24.6■■□□□ 1.53
PRDM16-202ENST00000378389 USP17L8P0C7I0 530 aa24.6■■□□□ 1.53
PRDM16-202ENST00000378389 MMP14P50281 582 aa24.59■■□□□ 1.53
PRDM16-202ENST00000378389 CCT4P50991 539 aaKnown RBP24.59■■□□□ 1.53
PRDM16-202ENST00000378389 FLIIQ13045 1269 aa24.59■■□□□ 1.53
PRDM16-202ENST00000378389 GCKRQ14397 625 aa24.59■■□□□ 1.53
PRDM16-202ENST00000378389 CDCA5Q96FF9 252 aa24.59■■□□□ 1.53
PRDM16-202ENST00000378389 MYOZ2Q9NPC6 264 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms