RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 TTC12Q9H892 705 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 LRRFIP2Q9Y608 721 aaKnown RBP12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 A0A087WZG4 1122 aa12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 ERC2O15083 957 aa12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 FAM98CQ17RN3 349 aaKnown RBP12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 KRBA2Q6ZNG9 492 aa12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 G3BP2Q9UN86 482 aaKnown RBP12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 ARFGEF2Q9Y6D5 1785 aa12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 RAD21O60216 631 aa12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 ALDH1L2Q3SY69 923 aa12.73□□□□□ -0.37
PCDHGA1-201ENST00000378105 SNRPA1P09661 255 aaKnown RBP12.72□□□□□ -0.37
PCDHGA1-201ENST00000378105 NOLC1Q14978 699 aaKnown RBP eCLIP12.72□□□□□ -0.37
PCDHGA1-201ENST00000378105 SKIDA1Q1XH10 827 aa12.72□□□□□ -0.37
PCDHGA1-201ENST00000378105 RBSNQ9H1K0 784 aa12.72□□□□□ -0.37
PCDHGA1-201ENST00000378105 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.72□□□□□ -0.37
PCDHGA1-201ENST00000378105 ZRSR1Q15695 479 aaKnown RBP12.72□□□□□ -0.37
PCDHGA1-201ENST00000378105 BRINP3Q76B58 766 aa12.72□□□□□ -0.37
PCDHGA1-201ENST00000378105 COPS6Q7L5N1 327 aa12.72□□□□□ -0.37
PCDHGA1-201ENST00000378105 SCN7AQ01118 1682 aa12.72□□□□□ -0.37
PCDHGA1-201ENST00000378105 NBPF10Q6P3W6 841 aaKnown RBP12.72□□□□□ -0.37
PCDHGA1-201ENST00000378105 UBE3BQ7Z3V4 1068 aa12.72□□□□□ -0.37
PCDHGA1-201ENST00000378105 FEZ1Q99689 392 aa12.72□□□□□ -0.37
PCDHGA1-201ENST00000378105 LRRCC1Q9C099 1032 aa12.72□□□□□ -0.37
PCDHGA1-201ENST00000378105 ZPR1O75312 459 aa12.71□□□□□ -0.37
PCDHGA1-201ENST00000378105 NEBLO76041 1014 aa12.71□□□□□ -0.37
PCDHGA1-201ENST00000378105 MAP2K2P36507 400 aa12.71□□□□□ -0.37
PCDHGA1-201ENST00000378105 NUTM1Q86Y26 1132 aa12.71□□□□□ -0.37
PCDHGA1-201ENST00000378105 CCDC191Q8NCU4 936 aa12.71□□□□□ -0.37
PCDHGA1-201ENST00000378105 XAGE3Q8WTP9 111 aa12.71□□□□□ -0.37
PCDHGA1-201ENST00000378105 GTF3C6Q969F1 213 aa12.71□□□□□ -0.37
PCDHGA1-201ENST00000378105 TRMT112Q9UI30 125 aaKnown RBP12.71□□□□□ -0.37
PCDHGA1-201ENST00000378105 DDX60Q8IY21 1712 aaKnown RBP12.71□□□□□ -0.37
PCDHGA1-201ENST00000378105 DLEC1Q9Y238 1755 aa12.71□□□□□ -0.37
PCDHGA1-201ENST00000378105 REC8O95072 547 aa12.71□□□□□ -0.37
PCDHGA1-201ENST00000378105 RUFY2Q8WXA3 655 aa12.71□□□□□ -0.37
PCDHGA1-201ENST00000378105 ZC3H12AQ5D1E8 599 aaKnown RBP12.71□□□□□ -0.38
PCDHGA1-201ENST00000378105 AACSQ86V21 672 aa12.71□□□□□ -0.38
PCDHGA1-201ENST00000378105 LTBP1Q14766 1721 aa12.71□□□□□ -0.38
PCDHGA1-201ENST00000378105 PSMD2Q13200 908 aa12.7□□□□□ -0.38
PCDHGA1-201ENST00000378105 RPS6KL1Q9Y6S9 549 aa12.7□□□□□ -0.38
PCDHGA1-201ENST00000378105 ST18O60284 1047 aa12.7□□□□□ -0.38
PCDHGA1-201ENST00000378105 ATP6V1AP38606 617 aa12.7□□□□□ -0.38
PCDHGA1-201ENST00000378105 CHAF1AQ13111 956 aaPredicted RBP12.7□□□□□ -0.38
PCDHGA1-201ENST00000378105 PROCA1Q8NCQ7 364 aaPredicted RBP12.7□□□□□ -0.38
PCDHGA1-201ENST00000378105 THOC1Q96FV9 657 aaKnown RBP12.7□□□□□ -0.38
PCDHGA1-201ENST00000378105 CACNA1FO60840 1977 aa12.7□□□□□ -0.38
PCDHGA1-201ENST00000378105 GCC1Q96CN9 775 aa12.7□□□□□ -0.38
PCDHGA1-201ENST00000378105 HYPKQ9NX55 129 aa12.7□□□□□ -0.38
PCDHGA1-201ENST00000378105 TBC1D2BQ9UPU7 963 aa12.7□□□□□ -0.38
PCDHGA1-201ENST00000378105 MEIS3Q99687 375 aa12.69□□□□□ -0.38
PCDHGA1-201ENST00000378105 MEGF6O75095 1541 aa12.69□□□□□ -0.38
PCDHGA1-201ENST00000378105 FKBP4Q02790 459 aaKnown RBP eCLIP12.69□□□□□ -0.38
PCDHGA1-201ENST00000378105 KRT222Q8N1A0 295 aa12.69□□□□□ -0.38
PCDHGA1-201ENST00000378105 ANKRD20A12PQ8NF67 263 aa12.69□□□□□ -0.38
PCDHGA1-201ENST00000378105 PRIMPOLQ96LW4 560 aa12.69□□□□□ -0.38
PCDHGA1-201ENST00000378105 CEP126Q9P2H0 1117 aa12.69□□□□□ -0.38
PCDHGA1-201ENST00000378105 CCDC96Q2M329 555 aa12.69□□□□□ -0.38
PCDHGA1-201ENST00000378105 INTS3Q68E01 1043 aaKnown RBP12.69□□□□□ -0.38
PCDHGA1-201ENST00000378105 ANKRD13DQ6ZTN6 518 aa12.69□□□□□ -0.38
PCDHGA1-201ENST00000378105 CHD1LQ86WJ1 897 aa12.69□□□□□ -0.38
PCDHGA1-201ENST00000378105 PLEKHF1Q96S99 279 aa12.69□□□□□ -0.38
PCDHGA1-201ENST00000378105 WWC3Q9ULE0 1092 aa12.69□□□□□ -0.38
PCDHGA1-201ENST00000378105 RNMTO43148 476 aaKnown RBP12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 ZKSCAN1P17029 563 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 CCDC91Q7Z6B0 441 aa12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 STK11IPQ8N1F8 1099 aa12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 ZNF219Q9P2Y4 722 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 VAMP4O75379 141 aa12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 TPM3P06753 285 aa12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 RPAP2Q8IXW5 612 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 FAM184AQ8NB25 1140 aa12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 ACRBPQ8NEB7 543 aa12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 TRIM35Q9UPQ4 493 aa12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 PHAXQ9H814 394 aaKnown RBP12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 CCDC39Q9UFE4 941 aa12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 KIAA0232Q92628 1395 aa12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 MAP3K5Q99683 1374 aa12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 IL16Q14005 1332 aa12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 RNF123Q5XPI4 1314 aa12.68□□□□□ -0.38
PCDHGA1-201ENST00000378105 PPP1R12AO14974 1030 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA1-201ENST00000378105 RLBP1P12271 317 aa12.67□□□□□ -0.38
PCDHGA1-201ENST00000378105 PRIM1P49642 420 aaKnown RBP12.67□□□□□ -0.38
PCDHGA1-201ENST00000378105 TTC31Q49AM3 519 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA1-201ENST00000378105 FAM182BQ5T319 152 aa12.67□□□□□ -0.38
PCDHGA1-201ENST00000378105 DCAF5Q96JK2 942 aa12.67□□□□□ -0.38
PCDHGA1-201ENST00000378105 CTNNA3Q9UI47 895 aa12.67□□□□□ -0.38
PCDHGA1-201ENST00000378105 LRRFIP1Q32MZ4 808 aaKnown RBP12.67□□□□□ -0.38
PCDHGA1-201ENST00000378105 RINLQ6ZS11 566 aa12.67□□□□□ -0.38
PCDHGA1-201ENST00000378105 ZNF446Q9NWS9 450 aa12.67□□□□□ -0.38
PCDHGA1-201ENST00000378105 MTMR7Q9Y216 660 aa12.67□□□□□ -0.38
PCDHGA1-201ENST00000378105 CDC45O75419 566 aa12.67□□□□□ -0.38
PCDHGA1-201ENST00000378105 AK7Q96M32 723 aa12.67□□□□□ -0.38
PCDHGA1-201ENST00000378105 C22orf23Q9BZE7 217 aa12.67□□□□□ -0.38
PCDHGA1-201ENST00000378105 CTR9Q6PD62 1173 aa12.66□□□□□ -0.38
PCDHGA1-201ENST00000378105 CNTROBQ8N137 903 aa12.66□□□□□ -0.38
PCDHGA1-201ENST00000378105 RBM27Q9P2N5 1060 aaKnown RBP12.66□□□□□ -0.38
PCDHGA1-201ENST00000378105 TSHZ3Q63HK5 1081 aa12.66□□□□□ -0.38
PCDHGA1-201ENST00000378105 G2E3Q7L622 706 aa12.66□□□□□ -0.38
PCDHGA1-201ENST00000378105 PACS2Q86VP3 889 aa12.66□□□□□ -0.38
PCDHGA1-201ENST00000378105 CCDC8Q9H0W5 538 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms