RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 GPSM2P81274 684 aa16.55■□□□□ 0.24
CKAP2-202ENST00000378034 MTX1Q13505 466 aa16.55■□□□□ 0.24
CKAP2-202ENST00000378034 ANKRD2Q9GZV1 360 aa16.55■□□□□ 0.24
CKAP2-202ENST00000378034 MINPP1Q9UNW1 487 aa16.55■□□□□ 0.24
CKAP2-202ENST00000378034 XDHP47989 1333 aa16.55■□□□□ 0.24
CKAP2-202ENST00000378034 IARSP41252 1262 aaKnown RBP16.55■□□□□ 0.24
CKAP2-202ENST00000378034 PRELPP51888 382 aa16.55■□□□□ 0.24
CKAP2-202ENST00000378034 LDHAL6AQ6ZMR3 332 aa16.55■□□□□ 0.24
CKAP2-202ENST00000378034 SLC51AQ86UW1 340 aa16.55■□□□□ 0.24
CKAP2-202ENST00000378034 ANKIB1Q9P2G1 1089 aa16.55■□□□□ 0.24
CKAP2-202ENST00000378034 ZNF277Q9NRM2 450 aaPredicted RBP16.54■□□□□ 0.24
CKAP2-202ENST00000378034 COG6Q9Y2V7 657 aa16.54■□□□□ 0.24
CKAP2-202ENST00000378034 UTRNP46939 3433 aa16.54■□□□□ 0.24
CKAP2-202ENST00000378034 DUOX1Q9NRD9 1551 aa16.54■□□□□ 0.24
CKAP2-202ENST00000378034 YY1P25490 414 aa16.53■□□□□ 0.24
CKAP2-202ENST00000378034 ZNF594Q96JF6 807 aaPredicted RBP16.53■□□□□ 0.24
CKAP2-202ENST00000378034 EYA3Q99504 573 aa16.53■□□□□ 0.24
CKAP2-202ENST00000378034 GGA1Q9UJY5 639 aa16.53■□□□□ 0.24
CKAP2-202ENST00000378034 ATP2B4P23634 1241 aa16.53■□□□□ 0.24
CKAP2-202ENST00000378034 RFX5P48382 616 aaPredicted RBP16.53■□□□□ 0.24
CKAP2-202ENST00000378034 CNNM1Q9NRU3 951 aa16.53■□□□□ 0.24
CKAP2-202ENST00000378034 FBXO3Q9UK99 471 aa16.53■□□□□ 0.24
CKAP2-202ENST00000378034 C20orf194Q5TEA3 1177 aa16.52■□□□□ 0.24
CKAP2-202ENST00000378034 TBC1D16Q8TBP0 767 aa16.52■□□□□ 0.24
CKAP2-202ENST00000378034 LEMD3Q9Y2U8 911 aa16.52■□□□□ 0.24
CKAP2-202ENST00000378034 TIAM2Q8IVF5 1701 aa16.52■□□□□ 0.24
CKAP2-202ENST00000378034 C6orf229H3BNL8 230 aa16.51■□□□□ 0.23
CKAP2-202ENST00000378034 CHRNDQ07001 517 aa16.51■□□□□ 0.23
CKAP2-202ENST00000378034 KIAA2012Q0VF49 1180 aa16.51■□□□□ 0.23
CKAP2-202ENST00000378034 JDP2Q8WYK2 163 aa16.51■□□□□ 0.23
CKAP2-202ENST00000378034 POLLQ9UGP5 575 aa16.51■□□□□ 0.23
CKAP2-202ENST00000378034 MROH5Q6ZUA9 1318 aa16.51■□□□□ 0.23
CKAP2-202ENST00000378034 SRGAP3O43295 1099 aa16.51■□□□□ 0.23
CKAP2-202ENST00000378034 PPIP5K2O43314 1243 aa16.51■□□□□ 0.23
CKAP2-202ENST00000378034 PTPN12Q05209 780 aaKnown RBP16.51■□□□□ 0.23
CKAP2-202ENST00000378034 WASHC4Q2M389 1173 aa16.51■□□□□ 0.23
CKAP2-202ENST00000378034 LARGE2Q8N3Y3 721 aa16.51■□□□□ 0.23
CKAP2-202ENST00000378034 UFL1O94874 794 aa16.5■□□□□ 0.23
CKAP2-202ENST00000378034 COPRSQ9NQ92 184 aa16.5■□□□□ 0.23
CKAP2-202ENST00000378034 ZBTB40Q9NUA8 1239 aa16.5■□□□□ 0.23
CKAP2-202ENST00000378034 RIPOR2Q9Y4F9 1068 aa16.5■□□□□ 0.23
CKAP2-202ENST00000378034 A0A1B0GUL6 1792 aa16.5■□□□□ 0.23
CKAP2-202ENST00000378034 ATP8B2P98198 1209 aa16.49■□□□□ 0.23
CKAP2-202ENST00000378034 EYA2O00167 538 aa16.49■□□□□ 0.23
CKAP2-202ENST00000378034 CIAO1O76071 339 aa16.49■□□□□ 0.23
CKAP2-202ENST00000378034 AOC3Q16853 763 aa16.49■□□□□ 0.23
CKAP2-202ENST00000378034 ZC3H12CQ9C0D7 883 aaKnown RBP16.49■□□□□ 0.23
CKAP2-202ENST00000378034 NIM1KQ8IY84 436 aa16.48■□□□□ 0.23
CKAP2-202ENST00000378034 KLHDC4Q8TBB5 520 aa16.48■□□□□ 0.23
CKAP2-202ENST00000378034 PUS3Q9BZE2 481 aaKnown RBP16.48■□□□□ 0.23
CKAP2-202ENST00000378034 ZNF804BA4D1E1 1349 aa16.48■□□□□ 0.23
CKAP2-202ENST00000378034 FZD9O00144 591 aa16.47■□□□□ 0.23
CKAP2-202ENST00000378034 LRRC24Q50LG9 513 aa16.47■□□□□ 0.23
CKAP2-202ENST00000378034 C1orf115Q9H7X2 142 aa16.47■□□□□ 0.23
CKAP2-202ENST00000378034 MED23Q9ULK4 1368 aa16.47■□□□□ 0.23
CKAP2-202ENST00000378034 KCNJ4P48050 445 aa16.47■□□□□ 0.23
CKAP2-202ENST00000378034 POLA2Q14181 598 aa16.47■□□□□ 0.23
CKAP2-202ENST00000378034 DPY19L2Q6NUT2 758 aa16.47■□□□□ 0.23
CKAP2-202ENST00000378034 SSH3Q8TE77 659 aa16.47■□□□□ 0.23
CKAP2-202ENST00000378034 PNMA6EA0A0J9YXQ4 647 aa16.46■□□□□ 0.23
CKAP2-202ENST00000378034 COL4A5P29400 1685 aa16.46■□□□□ 0.23
CKAP2-202ENST00000378034 METTL24Q5JXM2 366 aa16.46■□□□□ 0.23
CKAP2-202ENST00000378034 CEP85Q6P2H3 762 aa16.46■□□□□ 0.23
CKAP2-202ENST00000378034 RPAP2Q8IXW5 612 aaPredicted RBP16.46■□□□□ 0.23
CKAP2-202ENST00000378034 ZNRF3Q9ULT6 936 aa16.46■□□□□ 0.23
CKAP2-202ENST00000378034 RIMBP2O15034 1052 aa16.46■□□□□ 0.22
CKAP2-202ENST00000378034 TAF5LO75529 589 aa16.46■□□□□ 0.22
CKAP2-202ENST00000378034 IL15P40933 162 aaPredicted RBP16.46■□□□□ 0.22
CKAP2-202ENST00000378034 UBE4AQ14139 1066 aa16.46■□□□□ 0.22
CKAP2-202ENST00000378034 C15orf52Q6ZUT6 534 aaKnown RBP16.46■□□□□ 0.22
CKAP2-202ENST00000378034 HELBQ8NG08 1087 aaPredicted RBP16.46■□□□□ 0.22
CKAP2-202ENST00000378034 KDM2BQ8NHM5 1336 aa16.45■□□□□ 0.22
CKAP2-202ENST00000378034 GLTPD2A6NH11 291 aa16.45■□□□□ 0.22
CKAP2-202ENST00000378034 PDE8BO95263 885 aa16.45■□□□□ 0.22
CKAP2-202ENST00000378034 EIF6P56537 245 aaKnown RBP16.45■□□□□ 0.22
CKAP2-202ENST00000378034 ATG9AQ7Z3C6 839 aa16.45■□□□□ 0.22
CKAP2-202ENST00000378034 VGLL2Q8N8G2 317 aa16.44■□□□□ 0.22
CKAP2-202ENST00000378034 SIL1Q9H173 461 aa16.44■□□□□ 0.22
CKAP2-202ENST00000378034 PA2G4Q9UQ80 394 aaKnown RBP16.44■□□□□ 0.22
CKAP2-202ENST00000378034 SUPT16HQ9Y5B9 1047 aaKnown RBP16.44■□□□□ 0.22
CKAP2-202ENST00000378034 G3V3G9 751 aa16.44■□□□□ 0.22
CKAP2-202ENST00000378034 DCAF8Q5TAQ9 597 aa16.44■□□□□ 0.22
CKAP2-202ENST00000378034 GPR101Q96P66 508 aaPredicted RBP16.44■□□□□ 0.22
CKAP2-202ENST00000378034 HMMRO75330 724 aa16.43■□□□□ 0.22
CKAP2-202ENST00000378034 AAMPQ13685 434 aa16.43■□□□□ 0.22
CKAP2-202ENST00000378034 CEP126Q9P2H0 1117 aa16.43■□□□□ 0.22
CKAP2-202ENST00000378034 WTIPA6NIX2 430 aaPredicted RBP16.42■□□□□ 0.22
CKAP2-202ENST00000378034 ECE2O60344 883 aa16.42■□□□□ 0.22
CKAP2-202ENST00000378034 G3BP1Q13283 466 aaKnown RBP eCLIP16.42■□□□□ 0.22
CKAP2-202ENST00000378034 PODNQ7Z5L7 613 aa16.42■□□□□ 0.22
CKAP2-202ENST00000378034 ZNF784Q8NCA9 323 aaPredicted RBP16.42■□□□□ 0.22
CKAP2-202ENST00000378034 COA1Q9GZY4 146 aa16.42■□□□□ 0.22
CKAP2-202ENST00000378034 IRS2Q9Y4H2 1338 aa16.42■□□□□ 0.22
CKAP2-202ENST00000378034 TNIP1Q15025 636 aa16.42■□□□□ 0.22
CKAP2-202ENST00000378034 PUM3Q15397 648 aaKnown RBP16.42■□□□□ 0.22
CKAP2-202ENST00000378034 GPC2Q8N158 579 aa16.42■□□□□ 0.22
CKAP2-202ENST00000378034 DBNDD1Q9H9R9 158 aa16.42■□□□□ 0.22
CKAP2-202ENST00000378034 NOP58Q9Y2X3 529 aaKnown RBP16.42■□□□□ 0.22
CKAP2-202ENST00000378034 ZNF541Q9H0D2 1346 aa16.41■□□□□ 0.22
CKAP2-202ENST00000378034 DOK7Q18PE1 504 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms