RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 CTAGE15A4D2H0 777 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 CTAGE8P0CG41 777 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 PKP1Q13835 747 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 CTAGE6Q86UF2 777 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 CTAGE4Q8IX94 777 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 LINS1Q8NG48 757 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 HELLSQ9NRZ9 838 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 ZRANB1Q9UGI0 708 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 EFCAB6Q5THR3 1501 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 ZCCHC11Q5TAX3 1644 aaKnown RBP10.08□□□□□ -0.8
PCDH9-202ENST00000377865 CDK12Q9NYV4 1490 aaPredicted RBP10.08□□□□□ -0.8
PCDH9-202ENST00000377865 METTL24Q5JXM2 366 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 IFNKQ9P0W0 207 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 TRHP20396 242 aaPredicted RBP10.08□□□□□ -0.8
PCDH9-202ENST00000377865 NAA16Q6N069 864 aaPredicted RBP10.08□□□□□ -0.8
PCDH9-202ENST00000377865 TMEM87AQ8NBN3 555 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 AMOTL2Q9Y2J4 779 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 ELP1O95163 1332 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 A0A087WZG4 1122 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 KLF18A0A0U1RQI7 1052 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 GOLGA6L7A0A1B0GV03 622 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 NAPBQ9H115 298 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 RMND1Q9NWS8 449 aa10.08□□□□□ -0.8
PCDH9-202ENST00000377865 IDH1O75874 414 aaKnown RBP10.07□□□□□ -0.8
PCDH9-202ENST00000377865 FGFR1OPO95684 399 aaKnown RBP10.07□□□□□ -0.8
PCDH9-202ENST00000377865 SPAG1Q07617 926 aa10.07□□□□□ -0.8
PCDH9-202ENST00000377865 C17orf53Q8N3J3 647 aaPredicted RBP10.07□□□□□ -0.8
PCDH9-202ENST00000377865 TAF4BQ92750 862 aa10.07□□□□□ -0.8
PCDH9-202ENST00000377865 PHF8Q9UPP1 1060 aa10.07□□□□□ -0.8
PCDH9-202ENST00000377865 FAM114A1Q8IWE2 563 aa10.07□□□□□ -0.8
PCDH9-202ENST00000377865 IQSEC2Q5JU85 1478 aa10.07□□□□□ -0.8
PCDH9-202ENST00000377865 FAM177BA6PVY3 158 aa10.07□□□□□ -0.8
PCDH9-202ENST00000377865 KLHL10Q6JEL2 608 aa10.07□□□□□ -0.8
PCDH9-202ENST00000377865 ALS2CR12Q96Q35 445 aa10.07□□□□□ -0.8
PCDH9-202ENST00000377865 CWC25Q9NXE8 425 aaPredicted RBP10.07□□□□□ -0.8
PCDH9-202ENST00000377865 MED14O60244 1454 aa10.07□□□□□ -0.8
PCDH9-202ENST00000377865 ERBB4Q15303 1308 aa10.07□□□□□ -0.8
PCDH9-202ENST00000377865 UGGT1Q9NYU2 1555 aa10.07□□□□□ -0.8
PCDH9-202ENST00000377865 CTAGE9A4FU28 777 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 ALG1Q9BT22 464 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.06□□□□□ -0.8
PCDH9-202ENST00000377865 ZNF853P0CG23 659 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 MYL5Q02045 173 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 MAP3K12Q12852 859 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 PDLIM2Q96JY6 352 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 TCEANC2Q96MN5 208 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 TRIM34Q9BYJ4 488 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 RAI14Q9P0K7 980 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 IFIT3O14879 490 aaKnown RBP10.06□□□□□ -0.8
PCDH9-202ENST00000377865 HDXQ7Z353 690 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 TMX1Q9H3N1 280 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 PNMA6EA0A0J9YXQ4 647 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 G3V3G9 751 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 PAFAH1B1P43034 410 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 TMEM67Q5HYA8 995 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 DCAF8Q5TAQ9 597 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 MRFAP1L1Q96HT8 127 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 TANGO6Q9C0B7 1094 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 PAG1Q9NWQ8 432 aa10.06□□□□□ -0.8
PCDH9-202ENST00000377865 NLRP12P59046 1061 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 SOGA3Q5TF21 947 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 CDC37L1Q7L3B6 337 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 NBPF11Q86T75 865 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 GIMAP7Q8NHV1 300 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 SSH3Q8TE77 659 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 ZSWIM6Q9HCJ5 1215 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 MTMR6Q9Y217 621 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 ARHGAP31Q2M1Z3 1444 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 RNF113AO15541 343 aaKnown RBP10.05□□□□□ -0.8
PCDH9-202ENST00000377865 IFIT5Q13325 482 aaKnown RBP10.05□□□□□ -0.8
PCDH9-202ENST00000377865 MPHOSPH8Q99549 860 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 NAA15Q9BXJ9 866 aaKnown RBP10.05□□□□□ -0.8
PCDH9-202ENST00000377865 GLI2P10070 1586 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 SNRPA1P09661 255 aaKnown RBP10.05□□□□□ -0.8
PCDH9-202ENST00000377865 IL15P40933 162 aaPredicted RBP10.05□□□□□ -0.8
PCDH9-202ENST00000377865 HSP90AB3PQ58FF7 597 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 DDX46Q7L014 1031 aaKnown RBP10.05□□□□□ -0.8
PCDH9-202ENST00000377865 CTCFLQ8NI51 663 aaPredicted RBP10.05□□□□□ -0.8
PCDH9-202ENST00000377865 CPLX3Q8WVH0 158 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 NCOA3Q9Y6Q9 1424 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 PPP2R3AQ06190 1150 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 ELF2Q15723 593 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 EYA1Q99502 592 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 CNNM2Q9H8M5 875 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 PALD1Q9ULE6 856 aa10.05□□□□□ -0.8
PCDH9-202ENST00000377865 PA2G4Q9UQ80 394 aaKnown RBP10.05□□□□□ -0.8
PCDH9-202ENST00000377865 PATL2C9JE40 543 aaKnown RBP10.04□□□□□ -0.8
PCDH9-202ENST00000377865 CPA1P15085 419 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 APOBRQ0VD83 1088 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 TSG101Q99816 390 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 KRT23Q9C075 422 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 ODF2Q5BJF6 829 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 ANKRD13DQ6ZTN6 518 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 TDRD7Q8NHU6 1098 aaKnown RBP10.04□□□□□ -0.8
PCDH9-202ENST00000377865 BBXQ8WY36 941 aaPredicted RBP10.04□□□□□ -0.8
PCDH9-202ENST00000377865 SIRT1Q96EB6 747 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 FOXO3O43524 673 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 EVCP57679 992 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 SKIDA1Q1XH10 827 aa10.04□□□□□ -0.8
PCDH9-202ENST00000377865 ANKLE2Q86XL3 938 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms