RNA–Protein interactions for RNA: ENST00000377759.8

SNX5-201, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,270 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-201ENST00000377759 TRIM28Q13263 835 aaKnown RBP28.54■■■□□ 2.16
SNX5-201ENST00000377759 FERMT3Q86UX7 667 aa28.54■■■□□ 2.16
SNX5-201ENST00000377759 TICAM2Q86XR7 235 aa28.54■■■□□ 2.16
SNX5-201ENST00000377759 PIGBQ92521 554 aa28.54■■■□□ 2.16
SNX5-201ENST00000377759 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.54■■■□□ 2.16
SNX5-201ENST00000377759 Q6ZUG5 572 aa28.53■■■□□ 2.16
SNX5-201ENST00000377759 DNAJC10Q8IXB1 793 aa28.53■■■□□ 2.16
SNX5-201ENST00000377759 GTF3C6Q969F1 213 aa28.53■■■□□ 2.16
SNX5-201ENST00000377759 NOL7Q9UMY1 257 aaKnown RBP28.53■■■□□ 2.16
SNX5-201ENST00000377759 LETM1O95202 739 aaPredicted RBP28.52■■■□□ 2.16
SNX5-201ENST00000377759 FAM173BQ6P4H8 233 aa28.52■■■□□ 2.16
SNX5-201ENST00000377759 IFIT1P09914 478 aaKnown RBP28.52■■■□□ 2.16
SNX5-201ENST00000377759 TTC6Q86TZ1 520 aa28.52■■■□□ 2.16
SNX5-201ENST00000377759 DSCC1Q9BVC3 393 aa28.52■■■□□ 2.16
SNX5-201ENST00000377759 ZNF330Q9Y3S2 320 aaPredicted RBP28.51■■■□□ 2.15
SNX5-201ENST00000377759 JAK2O60674 1132 aa28.5■■■□□ 2.15
SNX5-201ENST00000377759 VSIG10Q8N0Z9 540 aa28.5■■■□□ 2.15
SNX5-201ENST00000377759 CEP126Q9P2H0 1117 aa28.5■■■□□ 2.15
SNX5-201ENST00000377759 FAM184AQ8NB25 1140 aa28.49■■■□□ 2.15
SNX5-201ENST00000377759 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.49■■■□□ 2.15
SNX5-201ENST00000377759 FUCA2Q9BTY2 467 aa28.49■■■□□ 2.15
SNX5-201ENST00000377759 PCCAP05165 728 aaPredicted RBP28.49■■■□□ 2.15
SNX5-201ENST00000377759 KRT85P78386 507 aa28.49■■■□□ 2.15
SNX5-201ENST00000377759 CCDC57Q2TAC2 916 aa28.49■■■□□ 2.15
SNX5-201ENST00000377759 FAM89AQ96GI7 184 aa28.49■■■□□ 2.15
SNX5-201ENST00000377759 PLA2G12BQ9BX93 195 aa28.49■■■□□ 2.15
SNX5-201ENST00000377759 LRRC2Q9BYS8 371 aa28.49■■■□□ 2.15
SNX5-201ENST00000377759 A0A0G2JLW4 131 aa28.48■■■□□ 2.15
SNX5-201ENST00000377759 RNF113AO15541 343 aaKnown RBP28.48■■■□□ 2.15
SNX5-201ENST00000377759 TEX13AQ9BXU3 409 aaPredicted RBP28.48■■■□□ 2.15
SNX5-201ENST00000377759 MAST3O60307 1309 aa28.48■■■□□ 2.15
SNX5-201ENST00000377759 HSPD1P10809 573 aaKnown RBP28.48■■■□□ 2.15
SNX5-201ENST00000377759 CSF1RP07333 972 aa28.47■■■□□ 2.15
SNX5-201ENST00000377759 MSNP26038 577 aaKnown RBP28.47■■■□□ 2.15
SNX5-201ENST00000377759 UVSSAQ2YD98 709 aa28.47■■■□□ 2.15
SNX5-201ENST00000377759 BRF1Q92994 677 aa28.47■■■□□ 2.15
SNX5-201ENST00000377759 NAP1L5Q96NT1 182 aaPredicted RBP28.47■■■□□ 2.15
SNX5-201ENST00000377759 ELP1O95163 1332 aa28.47■■■□□ 2.15
SNX5-201ENST00000377759 NHSL1Q5SYE7 1610 aa28.47■■■□□ 2.15
SNX5-201ENST00000377759 ADORA1P30542 326 aa28.46■■■□□ 2.15
SNX5-201ENST00000377759 FBXO3Q9UK99 471 aa28.46■■■□□ 2.15
SNX5-201ENST00000377759 GIMAP6Q6P9H5 292 aa28.46■■■□□ 2.15
SNX5-201ENST00000377759 DHX32Q7L7V1 743 aaKnown RBP28.46■■■□□ 2.15
SNX5-201ENST00000377759 LAMA4Q16363 1823 aa28.46■■■□□ 2.15
SNX5-201ENST00000377759 SPEF2Q9C093 1822 aa28.46■■■□□ 2.15
SNX5-201ENST00000377759 EXOSC10Q01780 885 aaKnown RBP28.45■■■□□ 2.15
SNX5-201ENST00000377759 SCRN1Q12765 414 aa28.45■■■□□ 2.15
SNX5-201ENST00000377759 KIF6Q6ZMV9 814 aa28.45■■■□□ 2.15
SNX5-201ENST00000377759 ZBTB38Q8NAP3 1195 aaPredicted RBP28.45■■■□□ 2.15
SNX5-201ENST00000377759 CCDC85AQ96PX6 553 aaPredicted RBP28.45■■■□□ 2.15
SNX5-201ENST00000377759 HMGB1P09429 215 aaKnown RBP28.45■■■□□ 2.14
SNX5-201ENST00000377759 HCLS1P14317 486 aaPredicted RBP28.45■■■□□ 2.14
SNX5-201ENST00000377759 KLHL34Q8N239 644 aa28.45■■■□□ 2.14
SNX5-201ENST00000377759 XAGE2Q96GT9 111 aa28.45■■■□□ 2.14
SNX5-201ENST00000377759 BTG4Q9NY30 223 aa28.45■■■□□ 2.14
SNX5-201ENST00000377759 M0R2C6 588 aa28.44■■■□□ 2.14
SNX5-201ENST00000377759 SYNE4Q8N205 404 aa28.44■■■□□ 2.14
SNX5-201ENST00000377759 OSBP2Q969R2 916 aa28.44■■■□□ 2.14
SNX5-201ENST00000377759 AGXT2Q9BYV1 514 aa28.44■■■□□ 2.14
SNX5-201ENST00000377759 ZKSCAN5Q9Y2L8 839 aa28.44■■■□□ 2.14
SNX5-201ENST00000377759 MAP3K15Q6ZN16 1313 aa28.43■■■□□ 2.14
SNX5-201ENST00000377759 PFKFB2O60825 505 aa28.43■■■□□ 2.14
SNX5-201ENST00000377759 STARD3NLO95772 234 aa28.43■■■□□ 2.14
SNX5-201ENST00000377759 HSP90B1P14625 803 aaKnown RBP28.43■■■□□ 2.14
SNX5-201ENST00000377759 HLFQ16534 295 aa28.43■■■□□ 2.14
SNX5-201ENST00000377759 GIGYF2Q6Y7W6 1299 aaKnown RBP28.43■■■□□ 2.14
SNX5-201ENST00000377759 SMARCC2Q8TAQ2 1214 aa28.43■■■□□ 2.14
SNX5-201ENST00000377759 SLC4A9Q96Q91 983 aa28.43■■■□□ 2.14
SNX5-201ENST00000377759 CCDC39Q9UFE4 941 aa28.43■■■□□ 2.14
SNX5-201ENST00000377759 E7EWF7 191 aa28.42■■■□□ 2.14
SNX5-201ENST00000377759 FKBP4Q02790 459 aaKnown RBP eCLIP28.42■■■□□ 2.14
SNX5-201ENST00000377759 TFIP11Q9UBB9 837 aaKnown RBP28.42■■■□□ 2.14
SNX5-201ENST00000377759 AKAP2Q9Y2D5 859 aa28.42■■■□□ 2.14
SNX5-201ENST00000377759 ZNF500O60304 480 aaPredicted RBP28.41■■■□□ 2.14
SNX5-201ENST00000377759 SCARF1Q14162 830 aa28.41■■■□□ 2.14
SNX5-201ENST00000377759 ITGB4P16144 1822 aa28.41■■■□□ 2.14
SNX5-201ENST00000377759 RESTQ13127 1097 aa28.41■■■□□ 2.14
SNX5-201ENST00000377759 CCDC158Q5M9N0 1113 aa28.41■■■□□ 2.14
SNX5-201ENST00000377759 DISP2A7MBM2 1401 aa28.41■■■□□ 2.14
SNX5-201ENST00000377759 LIG1P18858 919 aa28.4■■■□□ 2.14
SNX5-201ENST00000377759 SCAND2PQ9GZW5 306 aaPredicted RBP28.4■■■□□ 2.14
SNX5-201ENST00000377759 FOXP2O15409 715 aa28.4■■■□□ 2.14
SNX5-201ENST00000377759 IFIT5Q13325 482 aaKnown RBP28.4■■■□□ 2.14
SNX5-201ENST00000377759 TTC39AQ5SRH9 613 aa28.4■■■□□ 2.14
SNX5-201ENST00000377759 TTLL5Q6EMB2 1281 aa28.4■■■□□ 2.14
SNX5-201ENST00000377759 LEO1Q8WVC0 666 aaPredicted RBP28.4■■■□□ 2.14
SNX5-201ENST00000377759 DDX11Q96FC9 970 aa28.4■■■□□ 2.14
SNX5-201ENST00000377759 KDM4FA0A1W2PPD8 638 aa28.39■■■□□ 2.14
SNX5-201ENST00000377759 CTDNEP1O95476 244 aa28.39■■■□□ 2.14
SNX5-201ENST00000377759 APOBRQ0VD83 1088 aa28.39■■■□□ 2.14
SNX5-201ENST00000377759 NLRP10Q86W26 655 aa28.39■■■□□ 2.14
SNX5-201ENST00000377759 LLPHQ9BRT6 129 aaKnown RBP28.39■■■□□ 2.14
SNX5-201ENST00000377759 USP25Q9UHP3 1055 aa28.39■■■□□ 2.14
SNX5-201ENST00000377759 CDHR2Q9BYE9 1310 aa28.39■■■□□ 2.14
SNX5-201ENST00000377759 FGD1P98174 961 aa28.39■■■□□ 2.13
SNX5-201ENST00000377759 NSUN7Q8NE18 718 aaKnown RBP28.39■■■□□ 2.13
SNX5-201ENST00000377759 BCL9O00512 1426 aa28.38■■■□□ 2.13
SNX5-201ENST00000377759 OFD1O75665 1012 aa28.38■■■□□ 2.13
SNX5-201ENST00000377759 CYP19A1P11511 503 aaPredicted RBP28.38■■■□□ 2.13
SNX5-201ENST00000377759 GORABQ5T7V8 394 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms