RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 Q6ZUG5 572 aa13.92□□□□□ -0.18
TNFRSF9-201ENST00000377507 STOX1Q6ZVD7 989 aa13.92□□□□□ -0.18
TNFRSF9-201ENST00000377507 FERMT3Q86UX7 667 aa13.92□□□□□ -0.18
TNFRSF9-201ENST00000377507 PAG1Q9NWQ8 432 aa13.92□□□□□ -0.18
TNFRSF9-201ENST00000377507 RRP9O43818 475 aaKnown RBP13.92□□□□□ -0.18
TNFRSF9-201ENST00000377507 PFKFB2O60825 505 aa13.92□□□□□ -0.18
TNFRSF9-201ENST00000377507 CCDC192P0DO97 292 aa13.92□□□□□ -0.18
TNFRSF9-201ENST00000377507 FAM173BQ6P4H8 233 aa13.92□□□□□ -0.18
TNFRSF9-201ENST00000377507 DHX32Q7L7V1 743 aaKnown RBP13.92□□□□□ -0.18
TNFRSF9-201ENST00000377507 A1BGP04217 495 aa13.91□□□□□ -0.18
TNFRSF9-201ENST00000377507 PTMAP06454 111 aaKnown RBP13.91□□□□□ -0.18
TNFRSF9-201ENST00000377507 TIMM10P62072 90 aa13.91□□□□□ -0.18
TNFRSF9-201ENST00000377507 EXOSC10Q01780 885 aaKnown RBP13.91□□□□□ -0.18
TNFRSF9-201ENST00000377507 RESTQ13127 1097 aa13.91□□□□□ -0.18
TNFRSF9-201ENST00000377507 BRINP3Q76B58 766 aa13.91□□□□□ -0.18
TNFRSF9-201ENST00000377507 LEO1Q8WVC0 666 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF9-201ENST00000377507 COL5A2P05997 1499 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF9-201ENST00000377507 SPEF2Q9C093 1822 aa13.91□□□□□ -0.18
TNFRSF9-201ENST00000377507 GOLIM4O00461 696 aa13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 JAK2O60674 1132 aa13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 LIG1P18858 919 aa13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 KIAA2012Q0VF49 1180 aa13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 SCRN1Q12765 414 aa13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 STK3Q13188 491 aa13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 TRIM28Q13263 835 aaKnown RBP13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 FBXL16Q8N461 479 aa13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 SPATA32Q96LK8 384 aa13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 ISCA1Q9BUE6 129 aa13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 ZSCAN16Q9H4T2 348 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 FBXO3Q9UK99 471 aa13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 MAP3K11Q16584 847 aa13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 LRRC24Q50LG9 513 aa13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 TOM1L2Q6ZVM7 507 aa13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 CARD10Q9BWT7 1032 aa13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 NUP62CLQ9H1M0 184 aa13.9□□□□□ -0.18
TNFRSF9-201ENST00000377507 SOS2Q07890 1332 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF9-201ENST00000377507 IL2RBP14784 551 aa13.89□□□□□ -0.19
TNFRSF9-201ENST00000377507 PIBF1Q8WXW3 757 aa13.89□□□□□ -0.19
TNFRSF9-201ENST00000377507 BRF1Q92994 677 aa13.89□□□□□ -0.19
TNFRSF9-201ENST00000377507 NEUROD6Q96NK8 337 aa13.89□□□□□ -0.19
TNFRSF9-201ENST00000377507 PRDM11Q9NQV5 511 aa13.89□□□□□ -0.19
TNFRSF9-201ENST00000377507 DDX19AQ9NUU7 478 aaKnown RBP13.89□□□□□ -0.19
TNFRSF9-201ENST00000377507 CHMP3Q9Y3E7 222 aa13.89□□□□□ -0.19
TNFRSF9-201ENST00000377507 R3HCC1Q9Y3T6 440 aaKnown RBP13.89□□□□□ -0.19
TNFRSF9-201ENST00000377507 A0A1B0GUL7 405 aa13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 RNF113AO15541 343 aaKnown RBP13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 AP5Z1O43299 807 aa13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 HSPD1P10809 573 aaKnown RBP13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 TPRNQ4KMQ1 711 aa13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 NAA16Q6N069 864 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 FAM200AQ8TCP9 573 aa13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 PGBD1Q96JS3 809 aa13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 TFIP11Q9UBB9 837 aaKnown RBP13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 ADD1P35611 737 aaKnown RBP13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 TCIRG1Q13488 830 aa13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 NSUN7Q8NE18 718 aaKnown RBP13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 CLSTN2Q9H4D0 955 aa13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 ZBTB3Q9H5J0 574 aa13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 DACT1Q9NYF0 836 aa13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 MRVI1Q9Y6F6 885 aa13.88□□□□□ -0.19
TNFRSF9-201ENST00000377507 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
TNFRSF9-201ENST00000377507 XIRP1Q702N8 1843 aaKnown RBP13.87□□□□□ -0.19
TNFRSF9-201ENST00000377507 CTDNEP1O95476 244 aa13.87□□□□□ -0.19
TNFRSF9-201ENST00000377507 IFIT1P09914 478 aaKnown RBP13.87□□□□□ -0.19
TNFRSF9-201ENST00000377507 EVCP57679 992 aa13.87□□□□□ -0.19
TNFRSF9-201ENST00000377507 TYRO3Q06418 890 aa13.87□□□□□ -0.19
TNFRSF9-201ENST00000377507 ZNF594Q96JF6 807 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF9-201ENST00000377507 PLA2G12BQ9BX93 195 aa13.87□□□□□ -0.19
TNFRSF9-201ENST00000377507 CFAP45Q9UL16 551 aa13.87□□□□□ -0.19
TNFRSF9-201ENST00000377507 MAST3O60307 1309 aa13.87□□□□□ -0.19
TNFRSF9-201ENST00000377507 SALL1Q9NSC2 1324 aa13.87□□□□□ -0.19
TNFRSF9-201ENST00000377507 LAMA4Q16363 1823 aa13.86□□□□□ -0.19
TNFRSF9-201ENST00000377507 E7EWF7 191 aa13.86□□□□□ -0.19
TNFRSF9-201ENST00000377507 HSP90B1P14625 803 aaKnown RBP13.86□□□□□ -0.19
TNFRSF9-201ENST00000377507 HMGN5P82970 282 aaKnown RBP13.86□□□□□ -0.19
TNFRSF9-201ENST00000377507 HSP90AA2PQ14568 343 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF9-201ENST00000377507 SLFNL1Q499Z3 407 aa13.86□□□□□ -0.19
TNFRSF9-201ENST00000377507 ZNF274Q96GC6 653 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF9-201ENST00000377507 TNMDQ9H2S6 317 aa13.86□□□□□ -0.19
TNFRSF9-201ENST00000377507 SPTLC3Q9NUV7 552 aa13.86□□□□□ -0.19
TNFRSF9-201ENST00000377507 GOLGA6L4A6NEF3 574 aa13.86□□□□□ -0.19
TNFRSF9-201ENST00000377507 TPM3P06753 285 aa13.86□□□□□ -0.19
TNFRSF9-201ENST00000377507 CSF1RP07333 972 aa13.86□□□□□ -0.19
TNFRSF9-201ENST00000377507 ATL3Q6DD88 541 aa13.86□□□□□ -0.19
TNFRSF9-201ENST00000377507 PUS3Q9BZE2 481 aaKnown RBP13.86□□□□□ -0.19
TNFRSF9-201ENST00000377507 CEP126Q9P2H0 1117 aa13.86□□□□□ -0.19
TNFRSF9-201ENST00000377507 H3BQV1 296 aa13.85□□□□□ -0.19
TNFRSF9-201ENST00000377507 NOLC1Q14978 699 aaKnown RBP eCLIP13.85□□□□□ -0.19
TNFRSF9-201ENST00000377507 IFFO2Q5TF58 517 aa13.85□□□□□ -0.19
TNFRSF9-201ENST00000377507 SASS6Q6UVJ0 657 aa13.85□□□□□ -0.19
TNFRSF9-201ENST00000377507 VSIG10Q8N0Z9 540 aa13.85□□□□□ -0.19
TNFRSF9-201ENST00000377507 CHMP4CQ96CF2 233 aa13.85□□□□□ -0.19
TNFRSF9-201ENST00000377507 LRRC2Q9BYS8 371 aa13.85□□□□□ -0.19
TNFRSF9-201ENST00000377507 TTC12Q9H892 705 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF9-201ENST00000377507 RCOR1Q9UKL0 485 aa13.85□□□□□ -0.19
TNFRSF9-201ENST00000377507 AKAP2Q9Y2D5 859 aa13.85□□□□□ -0.19
TNFRSF9-201ENST00000377507 ABCC12Q96J65 1359 aa13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 NR1I2O75469 434 aa13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 PCCAP05165 728 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF9-201ENST00000377507 ZFYP08048 801 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms