RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 GRM8O00222 908 aa19.33■□□□□ 0.69
TRIM39-201ENST00000376656 KINO60870 393 aaKnown RBP19.33■□□□□ 0.69
TRIM39-201ENST00000376656 TEFQ10587 303 aa19.33■□□□□ 0.69
TRIM39-201ENST00000376656 CCDC129Q6ZRS4 1044 aa19.33■□□□□ 0.69
TRIM39-201ENST00000376656 LRRN4CLQ8ND94 238 aa19.33■□□□□ 0.69
TRIM39-201ENST00000376656 ENGASEQ8NFI3 743 aa19.33■□□□□ 0.69
TRIM39-201ENST00000376656 NDUFB9Q9Y6M9 179 aa19.33■□□□□ 0.69
TRIM39-201ENST00000376656 UBR1Q8IWV7 1749 aa19.33■□□□□ 0.68
TRIM39-201ENST00000376656 MARF1Q9Y4F3 1742 aaKnown RBP19.33■□□□□ 0.68
TRIM39-201ENST00000376656 PRAMEF22A3QJZ6 481 aa19.33■□□□□ 0.68
TRIM39-201ENST00000376656 SMARCC2Q8TAQ2 1214 aa19.33■□□□□ 0.68
TRIM39-201ENST00000376656 KCND1Q9NSA2 647 aa19.33■□□□□ 0.68
TRIM39-201ENST00000376656 MYH15Q9Y2K3 1946 aa19.32■□□□□ 0.68
TRIM39-201ENST00000376656 ERICH4A6NGS2 130 aa19.32■□□□□ 0.68
TRIM39-201ENST00000376656 FAM69CQ0P6D2 419 aa19.32■□□□□ 0.68
TRIM39-201ENST00000376656 CHMP4AQ9BY43 222 aa19.32■□□□□ 0.68
TRIM39-201ENST00000376656 AMOTL2Q9Y2J4 779 aa19.32■□□□□ 0.68
TRIM39-201ENST00000376656 PPFIA3O75145 1194 aa19.32■□□□□ 0.68
TRIM39-201ENST00000376656 ERCC6LQ2NKX8 1250 aa19.32■□□□□ 0.68
TRIM39-201ENST00000376656 E4F1Q66K89 784 aaPredicted RBP19.32■□□□□ 0.68
TRIM39-201ENST00000376656 MPRIPQ6WCQ1 1025 aa19.32■□□□□ 0.68
TRIM39-201ENST00000376656 CEP57L1Q8IYX8 460 aa19.32■□□□□ 0.68
TRIM39-201ENST00000376656 TMEM51Q9NW97 253 aa19.32■□□□□ 0.68
TRIM39-201ENST00000376656 TSPOAP1O95153 1857 aa19.32■□□□□ 0.68
TRIM39-201ENST00000376656 CYP21A2P08686 494 aa19.31■□□□□ 0.68
TRIM39-201ENST00000376656 BBXQ8WY36 941 aaPredicted RBP19.31■□□□□ 0.68
TRIM39-201ENST00000376656 SEC62Q99442 399 aaKnown RBP19.31■□□□□ 0.68
TRIM39-201ENST00000376656 FAM160A1Q05DH4 1040 aa19.31■□□□□ 0.68
TRIM39-201ENST00000376656 NBPF6Q5VWK0 638 aa19.31■□□□□ 0.68
TRIM39-201ENST00000376656 ABTB2Q8N961 1025 aa19.31■□□□□ 0.68
TRIM39-201ENST00000376656 FSIP1Q8NA03 581 aa19.31■□□□□ 0.68
TRIM39-201ENST00000376656 NSUN7Q8NE18 718 aaKnown RBP19.31■□□□□ 0.68
TRIM39-201ENST00000376656 NBPF4Q96M43 638 aa19.31■□□□□ 0.68
TRIM39-201ENST00000376656 HDAC5Q9UQL6 1122 aa19.31■□□□□ 0.68
TRIM39-201ENST00000376656 CTDNEP1O95476 244 aa19.3■□□□□ 0.68
TRIM39-201ENST00000376656 GTF2E1P29083 439 aaPredicted RBP19.3■□□□□ 0.68
TRIM39-201ENST00000376656 GSDMDP57764 484 aa19.3■□□□□ 0.68
TRIM39-201ENST00000376656 PPP1R13BQ96KQ4 1090 aa19.3■□□□□ 0.68
TRIM39-201ENST00000376656 OSBPL5Q9H0X9 879 aaPredicted RBP19.3■□□□□ 0.68
TRIM39-201ENST00000376656 SETD1BQ9UPS6 1966 aaKnown RBP19.3■□□□□ 0.68
TRIM39-201ENST00000376656 DIP2AQ14689 1571 aa19.3■□□□□ 0.68
TRIM39-201ENST00000376656 PLEKHG1Q9ULL1 1385 aa19.3■□□□□ 0.68
TRIM39-201ENST00000376656 CCDC66A2RUB6 948 aa19.3■□□□□ 0.68
TRIM39-201ENST00000376656 FGD1P98174 961 aa19.3■□□□□ 0.68
TRIM39-201ENST00000376656 GUCY1B3Q02153 619 aa19.3■□□□□ 0.68
TRIM39-201ENST00000376656 NAA16Q6N069 864 aaPredicted RBP19.3■□□□□ 0.68
TRIM39-201ENST00000376656 SYT10Q6XYQ8 523 aa19.3■□□□□ 0.68
TRIM39-201ENST00000376656 LINS1Q8NG48 757 aa19.3■□□□□ 0.68
TRIM39-201ENST00000376656 L2HGDHQ9H9P8 463 aa19.3■□□□□ 0.68
TRIM39-201ENST00000376656 KIF2AO00139 706 aaPredicted RBP19.29■□□□□ 0.68
TRIM39-201ENST00000376656 H2AFXP16104 143 aaPredicted RBP19.29■□□□□ 0.68
TRIM39-201ENST00000376656 ME1P48163 572 aa19.29■□□□□ 0.68
TRIM39-201ENST00000376656 AIMP1Q12904 312 aaKnown RBP19.29■□□□□ 0.68
TRIM39-201ENST00000376656 PTPDC1A2A3K4 754 aa19.29■□□□□ 0.68
TRIM39-201ENST00000376656 STOX1Q6ZVD7 989 aa19.29■□□□□ 0.68
TRIM39-201ENST00000376656 PFKFB2O60825 505 aa19.28■□□□□ 0.68
TRIM39-201ENST00000376656 ARMCX5Q6P1M9 558 aa19.28■□□□□ 0.68
TRIM39-201ENST00000376656 ZNF609O15014 1411 aa19.28■□□□□ 0.68
TRIM39-201ENST00000376656 ZNF530Q6P9A1 599 aaPredicted RBP19.28■□□□□ 0.68
TRIM39-201ENST00000376656 C14orf37Q86TY3 774 aa19.28■□□□□ 0.68
TRIM39-201ENST00000376656 UTYO14607 1347 aa19.28■□□□□ 0.68
TRIM39-201ENST00000376656 CCT2P78371 535 aaKnown RBP19.28■□□□□ 0.68
TRIM39-201ENST00000376656 APOBRQ0VD83 1088 aa19.28■□□□□ 0.68
TRIM39-201ENST00000376656 ILDR1Q86SU0 546 aaPredicted RBP19.28■□□□□ 0.68
TRIM39-201ENST00000376656 LLPHQ9BRT6 129 aaKnown RBP19.28■□□□□ 0.68
TRIM39-201ENST00000376656 TMC6Q7Z403 805 aa19.27■□□□□ 0.68
TRIM39-201ENST00000376656 XPO4Q9C0E2 1151 aaKnown RBP19.27■□□□□ 0.68
TRIM39-201ENST00000376656 U3KPZ7 1027 aaPredicted RBP19.27■□□□□ 0.68
TRIM39-201ENST00000376656 NAT10Q9H0A0 1025 aaKnown RBP19.27■□□□□ 0.68
TRIM39-201ENST00000376656 DBNLQ9UJU6 430 aaKnown RBP19.27■□□□□ 0.68
TRIM39-201ENST00000376656 SMC2O95347 1197 aa19.27■□□□□ 0.67
TRIM39-201ENST00000376656 CLCN6P51797 869 aa19.27■□□□□ 0.67
TRIM39-201ENST00000376656 BMS1Q14692 1282 aaKnown RBP19.27■□□□□ 0.67
TRIM39-201ENST00000376656 CCDC93Q567U6 631 aa19.27■□□□□ 0.67
TRIM39-201ENST00000376656 ZNF396Q96N95 335 aaPredicted RBP19.27■□□□□ 0.67
TRIM39-201ENST00000376656 NCOA5Q9HCD5 579 aaKnown RBP19.27■□□□□ 0.67
TRIM39-201ENST00000376656 IFNKQ9P0W0 207 aa19.27■□□□□ 0.67
TRIM39-201ENST00000376656 IMPACTQ9P2X3 320 aa19.27■□□□□ 0.67
TRIM39-201ENST00000376656 FHOD1Q9Y613 1164 aa19.27■□□□□ 0.67
TRIM39-201ENST00000376656 DPCR1Q3MIW9 517 aa19.26■□□□□ 0.67
TRIM39-201ENST00000376656 FMR1NBQ8N0W7 255 aaPredicted RBP19.26■□□□□ 0.67
TRIM39-201ENST00000376656 SDF4Q9BRK5 362 aa19.26■□□□□ 0.67
TRIM39-201ENST00000376656 A0A1B0GVL5 298 aa19.26■□□□□ 0.67
TRIM39-201ENST00000376656 EPHA10Q5JZY3 1008 aa19.26■□□□□ 0.67
TRIM39-201ENST00000376656 PCDHA7Q9UN72 937 aa19.26■□□□□ 0.67
TRIM39-201ENST00000376656 IGKV5-2P06315 115 aa19.25■□□□□ 0.67
TRIM39-201ENST00000376656 DNAJC2Q99543 621 aaKnown RBP19.25■□□□□ 0.67
TRIM39-201ENST00000376656 NOL10Q9BSC4 688 aaKnown RBP19.25■□□□□ 0.67
TRIM39-201ENST00000376656 IRX5P78411 483 aaPredicted RBP19.25■□□□□ 0.67
TRIM39-201ENST00000376656 AKAP4Q5JQC9 854 aa19.25■□□□□ 0.67
TRIM39-201ENST00000376656 ATP5JP18859 108 aa19.25■□□□□ 0.67
TRIM39-201ENST00000376656 TIGD1Q96MW7 591 aa19.25■□□□□ 0.67
TRIM39-201ENST00000376656 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.25■□□□□ 0.67
TRIM39-201ENST00000376656 SLIT1O75093 1534 aa19.25■□□□□ 0.67
TRIM39-201ENST00000376656 MRPS27Q92552 414 aaKnown RBP19.24■□□□□ 0.67
TRIM39-201ENST00000376656 NAP1L2Q9ULW6 460 aaPredicted RBP19.24■□□□□ 0.67
TRIM39-201ENST00000376656 ARHGAP29Q52LW3 1261 aa19.24■□□□□ 0.67
TRIM39-201ENST00000376656 CCDC150Q8NCX0 1101 aa19.24■□□□□ 0.67
TRIM39-201ENST00000376656 LRRC59Q96AG4 307 aaKnown RBP19.24■□□□□ 0.67
TRIM39-201ENST00000376656 LAMA4Q16363 1823 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms