RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 HLFQ16534 295 aa13.73□□□□□ -0.21
DDR1-227ENST00000376570 CCAR2Q8N163 923 aaKnown RBP13.73□□□□□ -0.21
DDR1-227ENST00000376570 DNAJC25Q9H1X3 360 aa13.73□□□□□ -0.21
DDR1-227ENST00000376570 OVOS2A0A0J9YW53 1432 aa13.73□□□□□ -0.21
DDR1-227ENST00000376570 OVOS2Q6IE36 1432 aa13.73□□□□□ -0.21
DDR1-227ENST00000376570 NBPF26B4DH59 902 aa13.73□□□□□ -0.21
DDR1-227ENST00000376570 ATP2B2Q01814 1243 aa13.73□□□□□ -0.21
DDR1-227ENST00000376570 NBPF14Q5TI25 921 aa13.73□□□□□ -0.21
DDR1-227ENST00000376570 NBPF10Q6P3W6 841 aaKnown RBP13.73□□□□□ -0.21
DDR1-227ENST00000376570 NBPF15Q8N660 670 aa13.73□□□□□ -0.21
DDR1-227ENST00000376570 XAGE2Q96GT9 111 aa13.73□□□□□ -0.21
DDR1-227ENST00000376570 TRMT1Q9NXH9 659 aaKnown RBP13.73□□□□□ -0.21
DDR1-227ENST00000376570 CDC42BPGQ6DT37 1551 aa13.72□□□□□ -0.21
DDR1-227ENST00000376570 RANBP6O60518 1105 aaKnown RBP13.72□□□□□ -0.21
DDR1-227ENST00000376570 IGSF3O75054 1194 aa13.72□□□□□ -0.21
DDR1-227ENST00000376570 PDCP20941 246 aa13.72□□□□□ -0.21
DDR1-227ENST00000376570 IMMTQ16891 758 aaKnown RBP13.72□□□□□ -0.21
DDR1-227ENST00000376570 FSD2A1L4K1 749 aa13.72□□□□□ -0.21
DDR1-227ENST00000376570 G3V3G9 751 aa13.72□□□□□ -0.21
DDR1-227ENST00000376570 FAM98CQ17RN3 349 aaKnown RBP13.72□□□□□ -0.21
DDR1-227ENST00000376570 DCAF8Q5TAQ9 597 aa13.72□□□□□ -0.21
DDR1-227ENST00000376570 ORC3Q9UBD5 711 aaPredicted RBP13.72□□□□□ -0.21
DDR1-227ENST00000376570 LIG1P18858 919 aa13.72□□□□□ -0.21
DDR1-227ENST00000376570 PTPN12Q05209 780 aaKnown RBP13.72□□□□□ -0.21
DDR1-227ENST00000376570 BRINP3Q76B58 766 aa13.72□□□□□ -0.21
DDR1-227ENST00000376570 PLBD2Q8NHP8 589 aa13.72□□□□□ -0.21
DDR1-227ENST00000376570 PHKBQ93100 1093 aa13.72□□□□□ -0.21
DDR1-227ENST00000376570 UIMC1Q96RL1 719 aa13.72□□□□□ -0.21
DDR1-227ENST00000376570 GREM2Q9H772 168 aa13.72□□□□□ -0.21
DDR1-227ENST00000376570 LRSAM1Q6UWE0 723 aa13.71□□□□□ -0.21
DDR1-227ENST00000376570 NAPBQ9H115 298 aa13.71□□□□□ -0.21
DDR1-227ENST00000376570 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
DDR1-227ENST00000376570 SEC31BQ9NQW1 1179 aa13.71□□□□□ -0.21
DDR1-227ENST00000376570 B4E1Z4 1266 aa13.71□□□□□ -0.22
DDR1-227ENST00000376570 CCDC192P0DO97 292 aa13.71□□□□□ -0.22
DDR1-227ENST00000376570 ZSCAN31Q96LW9 406 aaPredicted RBP13.71□□□□□ -0.22
DDR1-227ENST00000376570 MAP3K11Q16584 847 aa13.7□□□□□ -0.22
DDR1-227ENST00000376570 CCDC183Q5T5S1 534 aa13.7□□□□□ -0.22
DDR1-227ENST00000376570 CPLX2Q6PUV4 134 aaKnown RBP13.7□□□□□ -0.22
DDR1-227ENST00000376570 FSIP1Q8NA03 581 aa13.7□□□□□ -0.22
DDR1-227ENST00000376570 C8orf76Q96K31 380 aa13.7□□□□□ -0.22
DDR1-227ENST00000376570 KIF3AQ9Y496 699 aa13.7□□□□□ -0.22
DDR1-227ENST00000376570 NPHP4O75161 1426 aaPredicted RBP13.7□□□□□ -0.22
DDR1-227ENST00000376570 EYA2O00167 538 aa13.7□□□□□ -0.22
DDR1-227ENST00000376570 BRD1O95696 1058 aa13.7□□□□□ -0.22
DDR1-227ENST00000376570 CBX1P83916 185 aa13.7□□□□□ -0.22
DDR1-227ENST00000376570 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
DDR1-227ENST00000376570 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
DDR1-227ENST00000376570 TTC41PQ6P2S7 1318 aa13.7□□□□□ -0.22
DDR1-227ENST00000376570 PTPDC1A2A3K4 754 aa13.7□□□□□ -0.22
DDR1-227ENST00000376570 IFIT3O14879 490 aaKnown RBP13.7□□□□□ -0.22
DDR1-227ENST00000376570 CYP21A2P08686 494 aa13.7□□□□□ -0.22
DDR1-227ENST00000376570 MAGEB6Q8N7X4 407 aa13.7□□□□□ -0.22
DDR1-227ENST00000376570 KAZALD1Q96I82 304 aa13.7□□□□□ -0.22
DDR1-227ENST00000376570 A0A1B0GVL5 298 aa13.69□□□□□ -0.22
DDR1-227ENST00000376570 ERICH2A1L162 156 aa13.69□□□□□ -0.22
DDR1-227ENST00000376570 CTDSPL2Q05D32 466 aa13.69□□□□□ -0.22
DDR1-227ENST00000376570 DDB1Q16531 1140 aa13.69□□□□□ -0.22
DDR1-227ENST00000376570 ANO6Q4KMQ2 910 aa13.69□□□□□ -0.22
DDR1-227ENST00000376570 TFCP2L1Q9NZI6 479 aa13.69□□□□□ -0.22
DDR1-227ENST00000376570 MAPK8IP2Q13387 824 aaPredicted RBP13.69□□□□□ -0.22
DDR1-227ENST00000376570 KLHL10Q6JEL2 608 aa13.69□□□□□ -0.22
DDR1-227ENST00000376570 PIGBQ92521 554 aa13.69□□□□□ -0.22
DDR1-227ENST00000376570 ARMT1Q9H993 441 aa13.69□□□□□ -0.22
DDR1-227ENST00000376570 SHPRHQ149N8 1683 aa13.69□□□□□ -0.22
DDR1-227ENST00000376570 PRC1O43663 620 aa13.69□□□□□ -0.22
DDR1-227ENST00000376570 ANKRD1Q15327 319 aa13.69□□□□□ -0.22
DDR1-227ENST00000376570 F8W031 263 aaPredicted RBP13.68□□□□□ -0.22
DDR1-227ENST00000376570 IGHMBP2P38935 993 aaKnown RBP13.68□□□□□ -0.22
DDR1-227ENST00000376570 ANAPC15P60006 121 aa13.68□□□□□ -0.22
DDR1-227ENST00000376570 SCARF1Q14162 830 aa13.68□□□□□ -0.22
DDR1-227ENST00000376570 POLA2Q14181 598 aa13.68□□□□□ -0.22
DDR1-227ENST00000376570 DHX8Q14562 1220 aaKnown RBP13.68□□□□□ -0.22
DDR1-227ENST00000376570 AIFM3Q96NN9 605 aa13.68□□□□□ -0.22
DDR1-227ENST00000376570 SLC26A6Q9BXS9 759 aa13.68□□□□□ -0.22
DDR1-227ENST00000376570 MED14O60244 1454 aa13.68□□□□□ -0.22
DDR1-227ENST00000376570 KDRP35968 1356 aa13.68□□□□□ -0.22
DDR1-227ENST00000376570 IL15P40933 162 aaPredicted RBP13.68□□□□□ -0.22
DDR1-227ENST00000376570 CCAR1Q8IX12 1150 aaKnown RBP13.68□□□□□ -0.22
DDR1-227ENST00000376570 C16orf45Q96MC5 204 aaPredicted RBP13.68□□□□□ -0.22
DDR1-227ENST00000376570 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.68□□□□□ -0.222e-7■■■■□ 25.7
DDR1-227ENST00000376570 STAP2Q9UGK3 403 aa13.68□□□□□ -0.22
DDR1-227ENST00000376570 CCDC69A6NI79 296 aa13.68□□□□□ -0.22
DDR1-227ENST00000376570 CDK11BP21127 795 aaKnown RBP13.68□□□□□ -0.22
DDR1-227ENST00000376570 RPS6KB1P23443 525 aa13.68□□□□□ -0.22
DDR1-227ENST00000376570 PDE4CQ08493 712 aa13.68□□□□□ -0.22
DDR1-227ENST00000376570 SH2B1Q9NRF2 756 aaPredicted RBP13.68□□□□□ -0.22
DDR1-227ENST00000376570 CCDC39Q9UFE4 941 aa13.68□□□□□ -0.22
DDR1-227ENST00000376570 RIMS1Q86UR5 1692 aaKnown RBP13.68□□□□□ -0.22
DDR1-227ENST00000376570 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
DDR1-227ENST00000376570 PHKA1P46020 1223 aa13.67□□□□□ -0.22
DDR1-227ENST00000376570 UBE2HP62256 183 aa13.67□□□□□ -0.22
DDR1-227ENST00000376570 TTC6Q86TZ1 520 aa13.67□□□□□ -0.22
DDR1-227ENST00000376570 OSBPL3Q9H4L5 887 aa13.67□□□□□ -0.22
DDR1-227ENST00000376570 DENND2AQ9ULE3 1009 aa13.67□□□□□ -0.22
DDR1-227ENST00000376570 USP31Q70CQ4 1352 aa13.67□□□□□ -0.22
DDR1-227ENST00000376570 DLC1Q96QB1 1528 aa13.67□□□□□ -0.22
DDR1-227ENST00000376570 GPIHBP1Q8IV16 184 aa13.67□□□□□ -0.22
DDR1-227ENST00000376570 LRRFIP1Q32MZ4 808 aaKnown RBP13.66□□□□□ -0.22
DDR1-227ENST00000376570 TMEM67Q5HYA8 995 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms