RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 METTL24Q5JXM2 366 aa28.25■■■□□ 2.11
HLA-C-202ENST00000376237 CNKSR1Q969H4 720 aa28.25■■■□□ 2.11
HLA-C-202ENST00000376237 LNPKQ9C0E8 428 aa28.25■■■□□ 2.11
HLA-C-202ENST00000376237 ZNF622Q969S3 477 aaKnown RBP eCLIP28.24■■■□□ 2.11
HLA-C-202ENST00000376237 CHRNA5P30532 468 aa28.23■■■□□ 2.11
HLA-C-202ENST00000376237 IL1RAPL2Q9NP60 686 aa28.23■■■□□ 2.11
HLA-C-202ENST00000376237 AKAP2Q9Y2D5 859 aa28.23■■■□□ 2.11
HLA-C-202ENST00000376237 SMARCA5O60264 1052 aaPredicted RBP28.23■■■□□ 2.11
HLA-C-202ENST00000376237 MINPP1Q9UNW1 487 aa28.23■■■□□ 2.11
HLA-C-202ENST00000376237 KIF13BQ9NQT8 1826 aa28.22■■■□□ 2.11
HLA-C-202ENST00000376237 PDE8BO95263 885 aa28.22■■■□□ 2.11
HLA-C-202ENST00000376237 CHRNDQ07001 517 aa28.22■■■□□ 2.11
HLA-C-202ENST00000376237 ANKRD2Q9GZV1 360 aa28.22■■■□□ 2.11
HLA-C-202ENST00000376237 VGLL2Q8N8G2 317 aa28.21■■■□□ 2.11
HLA-C-202ENST00000376237 PPEF1O14829 653 aaPredicted RBP28.2■■■□□ 2.1
HLA-C-202ENST00000376237 SP8Q8IXZ3 490 aa28.2■■■□□ 2.1
HLA-C-202ENST00000376237 COL4A1P02462 1669 aa28.19■■■□□ 2.1
HLA-C-202ENST00000376237 DPEP1P16444 411 aa28.19■■■□□ 2.1
HLA-C-202ENST00000376237 TNNI3KQ59H18 835 aa28.19■■■□□ 2.1
HLA-C-202ENST00000376237 TMX4Q9H1E5 349 aaPredicted RBP28.19■■■□□ 2.1
HLA-C-202ENST00000376237 PPP1R1BQ9UD71 204 aaPredicted RBP28.19■■■□□ 2.1
HLA-C-202ENST00000376237 FPGT-TNNI3KV9GXZ4 949 aa28.19■■■□□ 2.1
HLA-C-202ENST00000376237 COL11A2P13942 1736 aaPredicted RBP28.19■■■□□ 2.1
HLA-C-202ENST00000376237 ATP6V0A2Q9Y487 856 aa28.18■■■□□ 2.1
HLA-C-202ENST00000376237 A0A0G2JLW4 131 aa28.18■■■□□ 2.1
HLA-C-202ENST00000376237 AACSQ86V21 672 aa28.18■■■□□ 2.1
HLA-C-202ENST00000376237 TTLL6Q8N841 843 aa28.18■■■□□ 2.1
HLA-C-202ENST00000376237 EAF2Q96CJ1 260 aaPredicted RBP28.18■■■□□ 2.1
HLA-C-202ENST00000376237 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.18■■■□□ 2.1
HLA-C-202ENST00000376237 IFIT2P09913 472 aaKnown RBP28.17■■■□□ 2.1
HLA-C-202ENST00000376237 KCNA3P22001 575 aa28.17■■■□□ 2.1
HLA-C-202ENST00000376237 PUM3Q15397 648 aaKnown RBP28.17■■■□□ 2.1
HLA-C-202ENST00000376237 TAF1P21675 1872 aa28.16■■■□□ 2.1
HLA-C-202ENST00000376237 PRPF40BQ6NWY9 871 aaKnown RBP28.16■■■□□ 2.1
HLA-C-202ENST00000376237 HELBQ8NG08 1087 aaPredicted RBP28.16■■■□□ 2.1
HLA-C-202ENST00000376237 BCL11AQ9H165 835 aa28.16■■■□□ 2.1
HLA-C-202ENST00000376237 PDE4AP27815 886 aa28.15■■■□□ 2.1
HLA-C-202ENST00000376237 ATP2B3Q16720 1220 aa28.15■■■□□ 2.1
HLA-C-202ENST00000376237 C16orf71Q8IYS4 520 aaPredicted RBP28.15■■■□□ 2.1
HLA-C-202ENST00000376237 KLHL34Q8N239 644 aa28.15■■■□□ 2.1
HLA-C-202ENST00000376237 LPIN2Q92539 896 aa28.15■■■□□ 2.1
HLA-C-202ENST00000376237 PIM2Q9P1W9 311 aa28.15■■■□□ 2.1
HLA-C-202ENST00000376237 A0A1B0GUL7 405 aa28.14■■■□□ 2.1
HLA-C-202ENST00000376237 TAF5LO75529 589 aa28.14■■■□□ 2.1
HLA-C-202ENST00000376237 XDHP47989 1333 aa28.14■■■□□ 2.1
HLA-C-202ENST00000376237 UBE4AQ14139 1066 aa28.14■■■□□ 2.1
HLA-C-202ENST00000376237 FGFR2P21802 821 aa28.13■■■□□ 2.09
HLA-C-202ENST00000376237 CC2D2BQ6DHV5 1058 aa28.13■■■□□ 2.09
HLA-C-202ENST00000376237 ANKIB1Q9P2G1 1089 aa28.13■■■□□ 2.09
HLA-C-202ENST00000376237 LEMD3Q9Y2U8 911 aa28.13■■■□□ 2.09
HLA-C-202ENST00000376237 TIMM10P62072 90 aa28.13■■■□□ 2.09
HLA-C-202ENST00000376237 NEUROD6Q96NK8 337 aa28.13■■■□□ 2.09
HLA-C-202ENST00000376237 PODXL2Q9NZ53 605 aa28.13■■■□□ 2.09
HLA-C-202ENST00000376237 SPEF2Q9C093 1822 aa28.12■■■□□ 2.09
HLA-C-202ENST00000376237 DLEC1Q9Y238 1755 aa28.12■■■□□ 2.09
HLA-C-202ENST00000376237 ZNF609O15014 1411 aa28.12■■■□□ 2.09
HLA-C-202ENST00000376237 SALL3Q9BXA9 1300 aa28.12■■■□□ 2.09
HLA-C-202ENST00000376237 IFIT1P09914 478 aaKnown RBP28.12■■■□□ 2.09
HLA-C-202ENST00000376237 SLC5A1P13866 664 aa28.12■■■□□ 2.09
HLA-C-202ENST00000376237 GPATCH3Q96I76 525 aa28.12■■■□□ 2.09
HLA-C-202ENST00000376237 CCDC8Q9H0W5 538 aaPredicted RBP28.12■■■□□ 2.09
HLA-C-202ENST00000376237 MX1P20591 662 aa28.11■■■□□ 2.09
HLA-C-202ENST00000376237 GRIPAP1Q4V328 841 aa28.11■■■□□ 2.09
HLA-C-202ENST00000376237 PLEKHM2Q8IWE5 1019 aa28.11■■■□□ 2.09
HLA-C-202ENST00000376237 NSFL1CQ9UNZ2 370 aaKnown RBP28.11■■■□□ 2.09
HLA-C-202ENST00000376237 KCNJ4P48050 445 aa28.1■■■□□ 2.09
HLA-C-202ENST00000376237 RGS3P49796 1198 aa28.1■■■□□ 2.09
HLA-C-202ENST00000376237 C7orf43Q8WVR3 580 aa28.1■■■□□ 2.09
HLA-C-202ENST00000376237 OSBPL3Q9H4L5 887 aa28.1■■■□□ 2.09
HLA-C-202ENST00000376237 STAP2Q9UGK3 403 aa28.1■■■□□ 2.09
HLA-C-202ENST00000376237 TTC41PQ6P2S7 1318 aa28.09■■■□□ 2.09
HLA-C-202ENST00000376237 ATP2B4P23634 1241 aa28.09■■■□□ 2.09
HLA-C-202ENST00000376237 OTUD7AQ8TE49 926 aaPredicted RBP28.09■■■□□ 2.09
HLA-C-202ENST00000376237 DBNLQ9UJU6 430 aaKnown RBP28.09■■■□□ 2.09
HLA-C-202ENST00000376237 ZNF804BA4D1E1 1349 aa28.09■■■□□ 2.09
HLA-C-202ENST00000376237 PDE1AP54750 535 aa28.08■■■□□ 2.09
HLA-C-202ENST00000376237 GPSM2P81274 684 aa28.08■■■□□ 2.09
HLA-C-202ENST00000376237 DALRD3Q5D0E6 543 aaKnown RBP28.08■■■□□ 2.09
HLA-C-202ENST00000376237 KIAA1551Q9HCM1 1747 aa28.08■■■□□ 2.09
HLA-C-202ENST00000376237 SOGA3Q5TF21 947 aa28.08■■■□□ 2.08
HLA-C-202ENST00000376237 SKAP1Q86WV1 359 aa28.08■■■□□ 2.08
HLA-C-202ENST00000376237 MPNDQ8N594 471 aa28.08■■■□□ 2.08
HLA-C-202ENST00000376237 XAGE2Q96GT9 111 aa28.08■■■□□ 2.08
HLA-C-202ENST00000376237 DBNDD2Q9BQY9 259 aa28.08■■■□□ 2.08
HLA-C-202ENST00000376237 FHDC1Q9C0D6 1143 aaPredicted RBP28.08■■■□□ 2.08
HLA-C-202ENST00000376237 ECHDC1Q9NTX5 307 aa28.08■■■□□ 2.08
HLA-C-202ENST00000376237 GGA1Q9UJY5 639 aa28.08■■■□□ 2.08
HLA-C-202ENST00000376237 LRRC37AA6NMS7 1700 aa28.07■■■□□ 2.08
HLA-C-202ENST00000376237 AOX1Q06278 1338 aa28.07■■■□□ 2.08
HLA-C-202ENST00000376237 GORABQ5T7V8 394 aa28.07■■■□□ 2.08
HLA-C-202ENST00000376237 TLR7Q9NYK1 1049 aaKnown RBP28.07■■■□□ 2.08
HLA-C-202ENST00000376237 ERC2O15083 957 aa28.06■■■□□ 2.08
HLA-C-202ENST00000376237 CCDC158Q5M9N0 1113 aa28.06■■■□□ 2.08
HLA-C-202ENST00000376237 DPP8Q6V1X1 898 aaPredicted RBP28.05■■■□□ 2.08
HLA-C-202ENST00000376237 SLX4Q8IY92 1834 aa28.05■■■□□ 2.08
HLA-C-202ENST00000376237 SNAP23O00161 211 aa28.04■■■□□ 2.08
HLA-C-202ENST00000376237 NLGN2Q8NFZ4 835 aa28.04■■■□□ 2.08
HLA-C-202ENST00000376237 C21orf2O43822 256 aa28.03■■■□□ 2.08
HLA-C-202ENST00000376237 UFL1O94874 794 aa28.03■■■□□ 2.08
HLA-C-202ENST00000376237 CAVIN4Q5BKX8 364 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms