RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 ZNF609O15014 1411 aa12.89□□□□□ -0.35
PDPN-203ENST00000376061 SF3B3Q15393 1217 aaKnown RBP12.89□□□□□ -0.35
PDPN-203ENST00000376061 LRRC24Q50LG9 513 aa12.89□□□□□ -0.35
PDPN-203ENST00000376061 TAF7LQ5H9L4 462 aa12.89□□□□□ -0.35
PDPN-203ENST00000376061 NLGN1Q8N2Q7 840 aa12.89□□□□□ -0.35
PDPN-203ENST00000376061 FBXO3Q9UK99 471 aa12.89□□□□□ -0.35
PDPN-203ENST00000376061 AK9Q5TCS8 1911 aa12.89□□□□□ -0.35
PDPN-203ENST00000376061 NPHP1O15259 732 aa12.88□□□□□ -0.35
PDPN-203ENST00000376061 SERPINB2P05120 415 aa12.88□□□□□ -0.35
PDPN-203ENST00000376061 IL15P40933 162 aaPredicted RBP12.88□□□□□ -0.35
PDPN-203ENST00000376061 MSL1Q68DK7 614 aa12.88□□□□□ -0.35
PDPN-203ENST00000376061 CLASRPQ8N2M8 674 aaKnown RBP12.88□□□□□ -0.35
PDPN-203ENST00000376061 UPF1Q92900 1129 aaKnown RBP eCLIP12.88□□□□□ -0.35
PDPN-203ENST00000376061 PUS3Q9BZE2 481 aaKnown RBP12.88□□□□□ -0.35
PDPN-203ENST00000376061 SEC31BQ9NQW1 1179 aa12.88□□□□□ -0.35
PDPN-203ENST00000376061 MX1P20591 662 aa12.87□□□□□ -0.35
PDPN-203ENST00000376061 PDE1AP54750 535 aa12.87□□□□□ -0.35
PDPN-203ENST00000376061 ST5P78524 1137 aa12.87□□□□□ -0.35
PDPN-203ENST00000376061 TFCP2Q12800 502 aa12.87□□□□□ -0.35
PDPN-203ENST00000376061 MMP10P09238 476 aa12.86□□□□□ -0.35
PDPN-203ENST00000376061 TTC22Q5TAA0 569 aa12.86□□□□□ -0.35
PDPN-203ENST00000376061 TSHZ3Q63HK5 1081 aa12.86□□□□□ -0.35
PDPN-203ENST00000376061 AACSQ86V21 672 aa12.86□□□□□ -0.35
PDPN-203ENST00000376061 EAF2Q96CJ1 260 aaPredicted RBP12.86□□□□□ -0.35
PDPN-203ENST00000376061 NLRP3Q96P20 1036 aa12.86□□□□□ -0.35
PDPN-203ENST00000376061 PDGFDQ9GZP0 370 aaPredicted RBP12.86□□□□□ -0.35
PDPN-203ENST00000376061 OSBPL3Q9H4L5 887 aa12.86□□□□□ -0.35
PDPN-203ENST00000376061 STAP2Q9UGK3 403 aa12.86□□□□□ -0.35
PDPN-203ENST00000376061 AOX1Q06278 1338 aa12.86□□□□□ -0.35
PDPN-203ENST00000376061 LRRC37AA6NMS7 1700 aa12.86□□□□□ -0.35
PDPN-203ENST00000376061 GSPT1P15170 499 aaKnown RBP12.85□□□□□ -0.35
PDPN-203ENST00000376061 TNNI3KQ59H18 835 aa12.85□□□□□ -0.35
PDPN-203ENST00000376061 BMP2KLQ5H9B9 411 aa12.85□□□□□ -0.35
PDPN-203ENST00000376061 LDHAL6AQ6ZMR3 332 aa12.85□□□□□ -0.35
PDPN-203ENST00000376061 CDC5LQ99459 802 aaKnown RBP12.85□□□□□ -0.35
PDPN-203ENST00000376061 CNNM1Q9NRU3 951 aa12.85□□□□□ -0.35
PDPN-203ENST00000376061 TLR7Q9NYK1 1049 aaKnown RBP12.85□□□□□ -0.35
PDPN-203ENST00000376061 RIPOR2Q9Y4F9 1068 aa12.85□□□□□ -0.35
PDPN-203ENST00000376061 FPGT-TNNI3KV9GXZ4 949 aa12.85□□□□□ -0.35
PDPN-203ENST00000376061 CACNA1SQ13698 1873 aa12.84□□□□□ -0.35
PDPN-203ENST00000376061 IFIT2P09913 472 aaKnown RBP12.84□□□□□ -0.35
PDPN-203ENST00000376061 TPRNQ4KMQ1 711 aa12.84□□□□□ -0.35
PDPN-203ENST00000376061 VGLL2Q8N8G2 317 aa12.84□□□□□ -0.35
PDPN-203ENST00000376061 GPR108Q9NPR9 543 aa12.84□□□□□ -0.35
PDPN-203ENST00000376061 DLEC1Q9Y238 1755 aa12.84□□□□□ -0.35
PDPN-203ENST00000376061 IGHMBP2P38935 993 aaKnown RBP12.83□□□□□ -0.36
PDPN-203ENST00000376061 C8orf34Q49A92 452 aa12.83□□□□□ -0.36
PDPN-203ENST00000376061 CRY2Q49AN0 593 aa12.83□□□□□ -0.36
PDPN-203ENST00000376061 METTL24Q5JXM2 366 aa12.83□□□□□ -0.36
PDPN-203ENST00000376061 PI4K2BQ8TCG2 481 aa12.83□□□□□ -0.36
PDPN-203ENST00000376061 CEP126Q9P2H0 1117 aa12.83□□□□□ -0.36
PDPN-203ENST00000376061 DBNLQ9UJU6 430 aaKnown RBP12.83□□□□□ -0.36
PDPN-203ENST00000376061 PARP3Q9Y6F1 533 aa12.83□□□□□ -0.36
PDPN-203ENST00000376061 TTC41PQ6P2S7 1318 aa12.83□□□□□ -0.36
PDPN-203ENST00000376061 MROH5Q6ZUA9 1318 aa12.83□□□□□ -0.36
PDPN-203ENST00000376061 KIF13BQ9NQT8 1826 aa12.83□□□□□ -0.36
PDPN-203ENST00000376061 ANKRD18AQ8IVF6 992 aa12.82□□□□□ -0.36
PDPN-203ENST00000376061 CELF1Q92879 486 aaKnown RBP12.82□□□□□ -0.36
PDPN-203ENST00000376061 GPATCH3Q96I76 525 aa12.82□□□□□ -0.36
PDPN-203ENST00000376061 MPHOSPH8Q99549 860 aa12.82□□□□□ -0.36
PDPN-203ENST00000376061 CCDC8Q9H0W5 538 aaPredicted RBP12.82□□□□□ -0.36
PDPN-203ENST00000376061 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
PDPN-203ENST00000376061 KLRG2A4D1S0 409 aaPredicted RBP12.81□□□□□ -0.36
PDPN-203ENST00000376061 CHADLQ6NUI6 762 aa12.81□□□□□ -0.36
PDPN-203ENST00000376061 DDX46Q7L014 1031 aaKnown RBP12.81□□□□□ -0.36
PDPN-203ENST00000376061 DBNDD2Q9BQY9 259 aa12.81□□□□□ -0.36
PDPN-203ENST00000376061 BRIP1Q9BX63 1249 aa12.81□□□□□ -0.36
PDPN-203ENST00000376061 ECHDC1Q9NTX5 307 aa12.81□□□□□ -0.36
PDPN-203ENST00000376061 C10orf71Q711Q0 1435 aa12.81□□□□□ -0.36
PDPN-203ENST00000376061 LTBP1Q14766 1721 aa12.81□□□□□ -0.36
PDPN-203ENST00000376061 ATP2B3Q16720 1220 aa12.81□□□□□ -0.36
PDPN-203ENST00000376061 SLC16A10Q8TF71 515 aa12.81□□□□□ -0.36
PDPN-203ENST00000376061 RPGRQ92834 1020 aaKnown RBP12.81□□□□□ -0.36
PDPN-203ENST00000376061 BACH2Q9BYV9 841 aa12.81□□□□□ -0.36
PDPN-203ENST00000376061 AKAP2Q9Y2D5 859 aa12.81□□□□□ -0.36
PDPN-203ENST00000376061 TULP1O00294 542 aaPredicted RBP12.8□□□□□ -0.36
PDPN-203ENST00000376061 GLRX3O76003 335 aaKnown RBP12.8□□□□□ -0.36
PDPN-203ENST00000376061 PDE8BO95263 885 aa12.8□□□□□ -0.36
PDPN-203ENST00000376061 SDSP20132 328 aa12.8□□□□□ -0.36
PDPN-203ENST00000376061 TIMM10P62072 90 aa12.8□□□□□ -0.36
PDPN-203ENST00000376061 RPS8P62241 208 aaKnown RBP12.8□□□□□ -0.36
PDPN-203ENST00000376061 CHRNDQ07001 517 aa12.8□□□□□ -0.36
PDPN-203ENST00000376061 GRAPQ13588 217 aa12.8□□□□□ -0.36
PDPN-203ENST00000376061 PUM3Q15397 648 aaKnown RBP12.8□□□□□ -0.36
PDPN-203ENST00000376061 GRAPLQ8TC17 118 aaPredicted RBP12.8□□□□□ -0.36
PDPN-203ENST00000376061 BSDC1Q9NW68 430 aaPredicted RBP12.8□□□□□ -0.36
PDPN-203ENST00000376061 SSUH2Q9Y2M2 353 aa12.8□□□□□ -0.36
PDPN-203ENST00000376061 KIAA1551Q9HCM1 1747 aa12.8□□□□□ -0.36
PDPN-203ENST00000376061 AKAP11Q9UKA4 1901 aa12.79□□□□□ -0.36
PDPN-203ENST00000376061 ERC2O15083 957 aa12.79□□□□□ -0.36
PDPN-203ENST00000376061 FGFR2P21802 821 aa12.79□□□□□ -0.36
PDPN-203ENST00000376061 ADORA1P30542 326 aa12.79□□□□□ -0.36
PDPN-203ENST00000376061 HOXA10P31260 410 aaPredicted RBP12.79□□□□□ -0.36
PDPN-203ENST00000376061 HELBQ8NG08 1087 aaPredicted RBP12.79□□□□□ -0.36
PDPN-203ENST00000376061 RBM17Q96I25 401 aaKnown RBP12.79□□□□□ -0.36
PDPN-203ENST00000376061 NEUROD6Q96NK8 337 aa12.79□□□□□ -0.36
PDPN-203ENST00000376061 TSHZ2Q9NRE2 1034 aa12.79□□□□□ -0.36
PDPN-203ENST00000376061 MYH13Q9UKX3 1938 aa12.78□□□□□ -0.36
PDPN-203ENST00000376061 MKRN4PQ13434 485 aaPredicted RBP12.78□□□□□ -0.36
PDPN-203ENST00000376061 R3HDM1Q15032 1099 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms