RNA–Protein interactions for RNA: ENST00000375300.5

SIK3-201, Transcript of SIK family kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SIK3, Length 6,213 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-201ENST00000375300 MTIF2P46199 727 aaKnown RBP18.35■□□□□ 0.53
SIK3-201ENST00000375300 MAP3K19Q56UN5 1328 aa18.35■□□□□ 0.53
SIK3-201ENST00000375300 RNF41Q9H4P4 317 aaPredicted RBP18.35■□□□□ 0.53
SIK3-201ENST00000375300 SOS1Q07889 1333 aaPredicted RBP18.35■□□□□ 0.53
SIK3-201ENST00000375300 CCDC171Q6TFL3 1326 aa18.35■□□□□ 0.53
SIK3-201ENST00000375300 TTC21AQ8NDW8 1320 aa18.35■□□□□ 0.53
SIK3-201ENST00000375300 CCDC129Q6ZRS4 1044 aa18.35■□□□□ 0.53
SIK3-201ENST00000375300 SHANK2Q9UPX8 1470 aa18.34■□□□□ 0.53
SIK3-201ENST00000375300 GADD45BO75293 160 aaPredicted RBP18.34■□□□□ 0.53
SIK3-201ENST00000375300 CCDC178Q5BJE1 867 aa18.34■□□□□ 0.53
SIK3-201ENST00000375300 ZNF444Q8N0Y2 327 aaPredicted RBP18.34■□□□□ 0.53
SIK3-201ENST00000375300 LMAN1P49257 510 aa18.34■□□□□ 0.53
SIK3-201ENST00000375300 RPGRQ92834 1020 aaKnown RBP18.34■□□□□ 0.53
SIK3-201ENST00000375300 PAG1Q9NWQ8 432 aa18.34■□□□□ 0.53
SIK3-201ENST00000375300 NPHP3Q7Z494 1330 aa18.34■□□□□ 0.53
SIK3-201ENST00000375300 BCCIPQ9P287 314 aaKnown RBP eCLIP18.33■□□□□ 0.53
SIK3-201ENST00000375300 RTL1A6NKG5 1358 aa18.33■□□□□ 0.53
SIK3-201ENST00000375300 ZBTB43O43298 467 aa18.33■□□□□ 0.53
SIK3-201ENST00000375300 TTF1Q15361 905 aaPredicted RBP18.33■□□□□ 0.52
SIK3-201ENST00000375300 SSR1P43307 286 aaKnown RBP18.33■□□□□ 0.52
SIK3-201ENST00000375300 CCDC113Q9H0I3 377 aa18.33■□□□□ 0.52
SIK3-201ENST00000375300 PRC1O43663 620 aa18.33■□□□□ 0.52
SIK3-201ENST00000375300 KLHDC4Q8TBB5 520 aa18.33■□□□□ 0.52
SIK3-201ENST00000375300 C6orf229H3BNL8 230 aa18.32■□□□□ 0.52
SIK3-201ENST00000375300 PTPDC1A2A3K4 754 aa18.32■□□□□ 0.52
SIK3-201ENST00000375300 ALDH1L1O75891 902 aa18.32■□□□□ 0.52
SIK3-201ENST00000375300 YEATS2Q9ULM3 1422 aa18.32■□□□□ 0.52
SIK3-201ENST00000375300 PNMA6EA0A0J9YXQ4 647 aa18.32■□□□□ 0.52
SIK3-201ENST00000375300 CCDC96Q2M329 555 aa18.32■□□□□ 0.52
SIK3-201ENST00000375300 AKAP4Q5JQC9 854 aa18.32■□□□□ 0.52
SIK3-201ENST00000375300 ANKRD62A6NC57 917 aa18.32■□□□□ 0.52
SIK3-201ENST00000375300 IDEP14735 1019 aa18.32■□□□□ 0.52
SIK3-201ENST00000375300 KCNG4Q8TDN1 519 aa18.32■□□□□ 0.52
SIK3-201ENST00000375300 INTS4Q96HW7 963 aaKnown RBP18.32■□□□□ 0.52
SIK3-201ENST00000375300 IL13P35225 146 aa18.31■□□□□ 0.52
SIK3-201ENST00000375300 TSG101Q99816 390 aa18.31■□□□□ 0.52
SIK3-201ENST00000375300 TTC41PQ6P2S7 1318 aa18.31■□□□□ 0.52
SIK3-201ENST00000375300 N4BP3O15049 544 aa18.31■□□□□ 0.52
SIK3-201ENST00000375300 MAP9Q49MG5 647 aa18.31■□□□□ 0.52
SIK3-201ENST00000375300 JAG2Q9Y219 1238 aa18.31■□□□□ 0.52
SIK3-201ENST00000375300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.31■□□□□ 0.52
SIK3-201ENST00000375300 TSPY2A6NKD2 308 aa18.31■□□□□ 0.52
SIK3-201ENST00000375300 WTAPQ15007 396 aa18.31■□□□□ 0.52
SIK3-201ENST00000375300 RFC4P35249 363 aa18.31■□□□□ 0.52
SIK3-201ENST00000375300 BMS1Q14692 1282 aaKnown RBP18.31■□□□□ 0.52
SIK3-201ENST00000375300 SEPT7Q16181 437 aaKnown RBP18.31■□□□□ 0.52
SIK3-201ENST00000375300 BTG4Q9NY30 223 aa18.31■□□□□ 0.52
SIK3-201ENST00000375300 MAP3K5Q99683 1374 aa18.31■□□□□ 0.52
SIK3-201ENST00000375300 CHAMP1Q96JM3 812 aa18.3■□□□□ 0.52
SIK3-201ENST00000375300 SNX14Q9Y5W7 946 aa18.3■□□□□ 0.52
SIK3-201ENST00000375300 ZFYVE9O95405 1425 aa18.3■□□□□ 0.52
SIK3-201ENST00000375300 SLC9C2Q5TAH2 1124 aa18.3■□□□□ 0.52
SIK3-201ENST00000375300 CAVIN2O95810 425 aa18.3■□□□□ 0.52
SIK3-201ENST00000375300 RRAGBQ5VZM2 374 aa18.3■□□□□ 0.52
SIK3-201ENST00000375300 TRMT1LQ7Z2T5 733 aaKnown RBP18.3■□□□□ 0.52
SIK3-201ENST00000375300 GOPCQ9HD26 462 aa18.3■□□□□ 0.52
SIK3-201ENST00000375300 IFNKQ9P0W0 207 aa18.3■□□□□ 0.52
SIK3-201ENST00000375300 HELBQ8NG08 1087 aaPredicted RBP18.3■□□□□ 0.52
SIK3-201ENST00000375300 ZNF622Q969S3 477 aaKnown RBP eCLIP18.3■□□□□ 0.522e-6■■□□□ 12.7
SIK3-201ENST00000375300 JADE2Q9NQC1 790 aa18.3■□□□□ 0.52
SIK3-201ENST00000375300 NDUFB9Q9Y6M9 179 aa18.3■□□□□ 0.52
SIK3-201ENST00000375300 SPTLC2O15270 562 aa18.3■□□□□ 0.52
SIK3-201ENST00000375300 ATP2B3Q16720 1220 aa18.29■□□□□ 0.52
SIK3-201ENST00000375300 FLT4P35916 1363 aa18.29■□□□□ 0.52
SIK3-201ENST00000375300 SPATA31E1Q6ZUB1 1445 aa18.29■□□□□ 0.52
SIK3-201ENST00000375300 SHTN1A0MZ66 631 aa18.29■□□□□ 0.52
SIK3-201ENST00000375300 FAM227BQ96M60 508 aa18.29■□□□□ 0.52
SIK3-201ENST00000375300 C19orf44Q9H6X5 657 aa18.29■□□□□ 0.52
SIK3-201ENST00000375300 SLC4A4Q9Y6R1 1079 aa18.29■□□□□ 0.52
SIK3-201ENST00000375300 SPTY2D1Q68D10 685 aaPredicted RBP18.29■□□□□ 0.52
SIK3-201ENST00000375300 KRT222Q8N1A0 295 aa18.29■□□□□ 0.52
SIK3-201ENST00000375300 A0A1B0GVL5 298 aa18.29■□□□□ 0.52
SIK3-201ENST00000375300 LGR6Q9HBX8 967 aa18.29■□□□□ 0.52
SIK3-201ENST00000375300 KARSQ15046 597 aaKnown RBP18.29■□□□□ 0.52
SIK3-201ENST00000375300 F8W031 263 aaPredicted RBP18.28■□□□□ 0.52
SIK3-201ENST00000375300 USO1O60763 962 aaKnown RBP18.28■□□□□ 0.52
SIK3-201ENST00000375300 DHX58Q96C10 678 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 DRC1Q96MC2 740 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 LTKP29376 864 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 STX17P56962 302 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 LMBRD1Q9NUN5 540 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 CALCOCO1Q9P1Z2 691 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 UGGT1Q9NYU2 1555 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 ATP10AO60312 1499 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 CRACR2BQ8N4Y2 399 aaPredicted RBP18.28■□□□□ 0.52
SIK3-201ENST00000375300 PODXL2Q9NZ53 605 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 RTN1Q16799 776 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 CTR9Q6PD62 1173 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 SYT10Q6XYQ8 523 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 LINS1Q8NG48 757 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 SIRT1Q96EB6 747 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 GSPT1P15170 499 aaKnown RBP18.28■□□□□ 0.52
SIK3-201ENST00000375300 PKP1Q13835 747 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 TRIM47Q96LD4 638 aa18.28■□□□□ 0.52
SIK3-201ENST00000375300 UBA7P41226 1012 aa18.27■□□□□ 0.52
SIK3-201ENST00000375300 MCM6Q14566 821 aa18.27■□□□□ 0.52
SIK3-201ENST00000375300 KAT14Q9H8E8 782 aa18.27■□□□□ 0.52
SIK3-201ENST00000375300 PAFAH1B1P43034 410 aa18.27■□□□□ 0.52
SIK3-201ENST00000375300 HS1BP3Q53T59 392 aa18.27■□□□□ 0.52
SIK3-201ENST00000375300 DDB1Q16531 1140 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms