RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 ISM2Q6H9L7 571 aa24.24■■□□□ 1.47
TGFBR1-202ENST00000374994 RNF187Q5TA31 235 aaPredicted RBP24.23■■□□□ 1.47
TGFBR1-202ENST00000374994 WTAPQ15007 396 aa24.23■■□□□ 1.47
TGFBR1-202ENST00000374994 HLTFQ14527 1009 aaKnown RBP eCLIP24.23■■□□□ 1.47
TGFBR1-202ENST00000374994 TRIM47Q96LD4 638 aa24.23■■□□□ 1.47
TGFBR1-202ENST00000374994 SPATA31E1Q6ZUB1 1445 aa24.23■■□□□ 1.47
TGFBR1-202ENST00000374994 AKR1B10O60218 316 aa24.23■■□□□ 1.47
TGFBR1-202ENST00000374994 TRERF1Q96PN7 1200 aa24.23■■□□□ 1.47
TGFBR1-202ENST00000374994 ZSWIM4Q9H7M6 989 aa24.23■■□□□ 1.47
TGFBR1-202ENST00000374994 HMGB2P26583 209 aaKnown RBP24.22■■□□□ 1.47
TGFBR1-202ENST00000374994 FAM160A1Q05DH4 1040 aa24.22■■□□□ 1.47
TGFBR1-202ENST00000374994 PHACTR3Q96KR7 559 aa24.22■■□□□ 1.47
TGFBR1-202ENST00000374994 HSF2BPO75031 334 aa24.22■■□□□ 1.47
TGFBR1-202ENST00000374994 CTAGE9A4FU28 777 aa24.22■■□□□ 1.47
TGFBR1-202ENST00000374994 RRAGBQ5VZM2 374 aa24.22■■□□□ 1.47
TGFBR1-202ENST00000374994 PDE4BQ07343 736 aa24.22■■□□□ 1.47
TGFBR1-202ENST00000374994 MTHFSDQ2M296 383 aaKnown RBP24.22■■□□□ 1.47
TGFBR1-202ENST00000374994 CCDC40Q4G0X9 1142 aa24.22■■□□□ 1.47
TGFBR1-202ENST00000374994 DZIP1Q86YF9 867 aaKnown RBP24.22■■□□□ 1.47
TGFBR1-202ENST00000374994 ZBTB3Q9H5J0 574 aa24.22■■□□□ 1.47
TGFBR1-202ENST00000374994 LMBRD1Q9NUN5 540 aa24.22■■□□□ 1.47
TGFBR1-202ENST00000374994 WWC2Q6AWC2 1192 aa24.22■■□□□ 1.47
TGFBR1-202ENST00000374994 GOLGA6L10A0A0M3HER8 536 aa24.21■■□□□ 1.47
TGFBR1-202ENST00000374994 SPECC1Q5M775 1068 aa24.21■■□□□ 1.47
TGFBR1-202ENST00000374994 V9GYY5 206 aaPredicted RBP24.21■■□□□ 1.47
TGFBR1-202ENST00000374994 DESP17661 470 aa24.21■■□□□ 1.47
TGFBR1-202ENST00000374994 KRT83P78385 493 aa24.21■■□□□ 1.47
TGFBR1-202ENST00000374994 ANKRD62A6NC57 917 aa24.21■■□□□ 1.47
TGFBR1-202ENST00000374994 OPA1O60313 960 aa24.21■■□□□ 1.47
TGFBR1-202ENST00000374994 TRIM21P19474 475 aaKnown RBP24.21■■□□□ 1.47
TGFBR1-202ENST00000374994 FBLN1P23142 703 aa24.21■■□□□ 1.47
TGFBR1-202ENST00000374994 CCDC91Q7Z6B0 441 aa24.21■■□□□ 1.47
TGFBR1-202ENST00000374994 KIAA0556O60303 1618 aa24.21■■□□□ 1.47
TGFBR1-202ENST00000374994 PTPDC1A2A3K4 754 aa24.2■■□□□ 1.47
TGFBR1-202ENST00000374994 ATP5J2-PTCD1G3V325 749 aa24.2■■□□□ 1.47
TGFBR1-202ENST00000374994 MEX3CQ5U5Q3 659 aaKnown RBP24.2■■□□□ 1.47
TGFBR1-202ENST00000374994 GIGYF2Q6Y7W6 1299 aaKnown RBP24.2■■□□□ 1.46
TGFBR1-202ENST00000374994 MSH6P52701 1360 aa24.2■■□□□ 1.46
TGFBR1-202ENST00000374994 LMOD1P29536 600 aaPredicted RBP24.2■■□□□ 1.46
TGFBR1-202ENST00000374994 LRRC2Q9BYS8 371 aa24.2■■□□□ 1.46
TGFBR1-202ENST00000374994 SPECC1LQ69YQ0 1117 aa24.2■■□□□ 1.46
TGFBR1-202ENST00000374994 PRC1O43663 620 aa24.19■■□□□ 1.46
TGFBR1-202ENST00000374994 ANXA1P04083 346 aa24.19■■□□□ 1.46
TGFBR1-202ENST00000374994 RTN1Q16799 776 aa24.19■■□□□ 1.46
TGFBR1-202ENST00000374994 SLF2Q8IX21 1173 aa24.19■■□□□ 1.46
TGFBR1-202ENST00000374994 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.19■■□□□ 1.46
TGFBR1-202ENST00000374994 CLSTN2Q9H4D0 955 aa24.19■■□□□ 1.46
TGFBR1-202ENST00000374994 TNIP1Q15025 636 aa24.19■■□□□ 1.46
TGFBR1-202ENST00000374994 CETN1Q12798 172 aa24.19■■□□□ 1.46
TGFBR1-202ENST00000374994 LLPHQ9BRT6 129 aaKnown RBP24.19■■□□□ 1.46
TGFBR1-202ENST00000374994 XAGE3Q8WTP9 111 aa24.18■■□□□ 1.46
TGFBR1-202ENST00000374994 PPP1R9BQ96SB3 815 aa24.18■■□□□ 1.46
TGFBR1-202ENST00000374994 PAG1Q9NWQ8 432 aa24.18■■□□□ 1.46
TGFBR1-202ENST00000374994 ESR2Q92731 530 aa24.18■■□□□ 1.46
TGFBR1-202ENST00000374994 PSMA7O14818 248 aa24.18■■□□□ 1.46
TGFBR1-202ENST00000374994 RNF113AO15541 343 aaKnown RBP24.18■■□□□ 1.46
TGFBR1-202ENST00000374994 CCDC144CPQ8IYA2 1237 aa24.18■■□□□ 1.46
TGFBR1-202ENST00000374994 LDHCP07864 332 aa24.18■■□□□ 1.46
TGFBR1-202ENST00000374994 GABPB1Q06547 395 aaPredicted RBP24.18■■□□□ 1.46
TGFBR1-202ENST00000374994 TUBB2AQ13885 445 aa24.18■■□□□ 1.46
TGFBR1-202ENST00000374994 TUBB2BQ9BVA1 445 aa24.18■■□□□ 1.46
TGFBR1-202ENST00000374994 CCDC113Q9H0I3 377 aa24.18■■□□□ 1.46
TGFBR1-202ENST00000374994 IFNKQ9P0W0 207 aa24.18■■□□□ 1.46
TGFBR1-202ENST00000374994 EXOC1Q9NV70 894 aa24.18■■□□□ 1.46
TGFBR1-202ENST00000374994 TACC1O75410 805 aa24.17■■□□□ 1.46
TGFBR1-202ENST00000374994 MAATS1Q7Z4T9 603 aa24.17■■□□□ 1.46
TGFBR1-202ENST00000374994 MCM6Q14566 821 aa24.17■■□□□ 1.46
TGFBR1-202ENST00000374994 CDC5LQ99459 802 aaKnown RBP24.17■■□□□ 1.46
TGFBR1-202ENST00000374994 KAT14Q9H8E8 782 aa24.17■■□□□ 1.46
TGFBR1-202ENST00000374994 MAP3K5Q99683 1374 aa24.17■■□□□ 1.46
TGFBR1-202ENST00000374994 TRIM75PA6NK02 468 aa24.17■■□□□ 1.46
TGFBR1-202ENST00000374994 KRT86O43790 486 aa24.17■■□□□ 1.46
TGFBR1-202ENST00000374994 MYL5Q02045 173 aa24.17■■□□□ 1.46
TGFBR1-202ENST00000374994 IDEP14735 1019 aa24.17■■□□□ 1.46
TGFBR1-202ENST00000374994 ZNF518AQ6AHZ1 1483 aa24.16■■□□□ 1.46
TGFBR1-202ENST00000374994 SYT10Q6XYQ8 523 aa24.16■■□□□ 1.46
TGFBR1-202ENST00000374994 ATP2B3Q16720 1220 aa24.16■■□□□ 1.46
TGFBR1-202ENST00000374994 TRIM35Q9UPQ4 493 aa24.16■■□□□ 1.46
TGFBR1-202ENST00000374994 COPS6Q7L5N1 327 aa24.16■■□□□ 1.46
TGFBR1-202ENST00000374994 ABCC1P33527 1531 aa24.16■■□□□ 1.46
TGFBR1-202ENST00000374994 BRD1O95696 1058 aa24.16■■□□□ 1.46
TGFBR1-202ENST00000374994 HOXB7P09629 217 aa24.16■■□□□ 1.46
TGFBR1-202ENST00000374994 LIG1P18858 919 aa24.16■■□□□ 1.46
TGFBR1-202ENST00000374994 SGSM2O43147 1006 aa24.15■■□□□ 1.46
TGFBR1-202ENST00000374994 ZNF500O60304 480 aaPredicted RBP24.15■■□□□ 1.46
TGFBR1-202ENST00000374994 MARCKSP29966 332 aaPredicted RBP24.15■■□□□ 1.46
TGFBR1-202ENST00000374994 LMBR1LQ6UX01 489 aa24.15■■□□□ 1.46
TGFBR1-202ENST00000374994 FOXO3O43524 673 aa24.15■■□□□ 1.46
TGFBR1-202ENST00000374994 GNAQP50148 359 aa24.15■■□□□ 1.46
TGFBR1-202ENST00000374994 RAB11FIP4Q86YS3 637 aa24.15■■□□□ 1.46
TGFBR1-202ENST00000374994 TMCO5BA8MYB1 307 aa24.15■■□□□ 1.46
TGFBR1-202ENST00000374994 RPS6KB1P23443 525 aa24.15■■□□□ 1.46
TGFBR1-202ENST00000374994 STXBP4Q6ZWJ1 553 aa24.15■■□□□ 1.46
TGFBR1-202ENST00000374994 ZSCAN29Q8IWY8 852 aaPredicted RBP24.15■■□□□ 1.46
TGFBR1-202ENST00000374994 RIMS2Q9UQ26 1411 aa24.14■■□□□ 1.46
TGFBR1-202ENST00000374994 TRAPPC8Q9Y2L5 1435 aa24.14■■□□□ 1.46
TGFBR1-202ENST00000374994 CCDC172P0C7W6 258 aa24.14■■□□□ 1.46
TGFBR1-202ENST00000374994 ELP1O95163 1332 aa24.14■■□□□ 1.46
TGFBR1-202ENST00000374994 CAPN2P17655 700 aa24.14■■□□□ 1.45
TGFBR1-202ENST00000374994 HELLSQ9NRZ9 838 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms