RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 CCDC178Q5BJE1 867 aa22.48■■□□□ 1.19
TGFBR1-201ENST00000374990 BICC1Q9H694 974 aaKnown RBP22.48■■□□□ 1.19
TGFBR1-201ENST00000374990 USO1O60763 962 aaKnown RBP22.48■■□□□ 1.19
TGFBR1-201ENST00000374990 RTN1Q16799 776 aa22.48■■□□□ 1.19
TGFBR1-201ENST00000374990 CACNA2D4Q7Z3S7 1137 aa22.48■■□□□ 1.19
TGFBR1-201ENST00000374990 KAT14Q9H8E8 782 aa22.48■■□□□ 1.19
TGFBR1-201ENST00000374990 SPTLC2O15270 562 aa22.47■■□□□ 1.19
TGFBR1-201ENST00000374990 SPAG1Q07617 926 aa22.47■■□□□ 1.19
TGFBR1-201ENST00000374990 ZNF790Q6PG37 636 aa22.47■■□□□ 1.19
TGFBR1-201ENST00000374990 CCDC102AQ96A19 550 aa22.47■■□□□ 1.19
TGFBR1-201ENST00000374990 ABCA8O94911 1581 aa22.47■■□□□ 1.19
TGFBR1-201ENST00000374990 KDM5CP41229 1560 aa22.47■■□□□ 1.19
TGFBR1-201ENST00000374990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.47■■□□□ 1.195e-7■■■■□ 23.8
TGFBR1-201ENST00000374990 NUP88Q99567 741 aaPredicted RBP22.47■■□□□ 1.19
TGFBR1-201ENST00000374990 VPS36Q86VN1 386 aa22.47■■□□□ 1.19
TGFBR1-201ENST00000374990 GNAQP50148 359 aa22.46■■□□□ 1.19
TGFBR1-201ENST00000374990 JAKMIP3Q5VZ66 844 aa22.46■■□□□ 1.19
TGFBR1-201ENST00000374990 BRAPQ7Z569 592 aa22.46■■□□□ 1.19
TGFBR1-201ENST00000374990 PPFIA3O75145 1194 aa22.46■■□□□ 1.19
TGFBR1-201ENST00000374990 GNAT2P19087 354 aa22.46■■□□□ 1.19
TGFBR1-201ENST00000374990 RAB11FIP4Q86YS3 637 aa22.46■■□□□ 1.19
TGFBR1-201ENST00000374990 RPGRQ92834 1020 aaKnown RBP22.46■■□□□ 1.19
TGFBR1-201ENST00000374990 TSPYL1Q9H0U9 437 aa22.46■■□□□ 1.19
TGFBR1-201ENST00000374990 TFCP2Q12800 502 aa22.46■■□□□ 1.19
TGFBR1-201ENST00000374990 ANKRD18AQ8IVF6 992 aa22.46■■□□□ 1.19
TGFBR1-201ENST00000374990 SKILP12757 684 aa22.45■■□□□ 1.18
TGFBR1-201ENST00000374990 CALML4Q96GE6 196 aa22.45■■□□□ 1.18
TGFBR1-201ENST00000374990 HELLSQ9NRZ9 838 aa22.45■■□□□ 1.18
TGFBR1-201ENST00000374990 KDM5AP29375 1690 aaKnown RBP22.45■■□□□ 1.18
TGFBR1-201ENST00000374990 ARHGEF10O15013 1369 aa22.45■■□□□ 1.18
TGFBR1-201ENST00000374990 CYP7A1P22680 504 aa22.45■■□□□ 1.18
TGFBR1-201ENST00000374990 UBASH3AP57075 661 aa22.45■■□□□ 1.18
TGFBR1-201ENST00000374990 METTL22Q9BUU2 404 aaPredicted RBP22.45■■□□□ 1.18
TGFBR1-201ENST00000374990 PRM3Q9NNZ6 103 aa22.45■■□□□ 1.18
TGFBR1-201ENST00000374990 PIP4K2BP78356 416 aa22.45■■□□□ 1.18
TGFBR1-201ENST00000374990 KLHL34Q8N239 644 aa22.45■■□□□ 1.18
TGFBR1-201ENST00000374990 DNAJC25Q9H1X3 360 aa22.45■■□□□ 1.18
TGFBR1-201ENST00000374990 POTEB2H3BUK9 544 aa22.44■■□□□ 1.18
TGFBR1-201ENST00000374990 SMARCC1Q92922 1105 aaPredicted RBP22.44■■□□□ 1.18
TGFBR1-201ENST00000374990 RMND1Q9NWS8 449 aa22.44■■□□□ 1.18
TGFBR1-201ENST00000374990 CPLX3Q8WVH0 158 aa22.44■■□□□ 1.18
TGFBR1-201ENST00000374990 KDM5DQ9BY66 1539 aa22.44■■□□□ 1.18
TGFBR1-201ENST00000374990 MPHOSPH10O00566 681 aaKnown RBP22.44■■□□□ 1.18
TGFBR1-201ENST00000374990 CEP135Q66GS9 1140 aa22.44■■□□□ 1.18
TGFBR1-201ENST00000374990 PTPDC1A2A3K4 754 aa22.44■■□□□ 1.18
TGFBR1-201ENST00000374990 PAFAH1B1P43034 410 aa22.44■■□□□ 1.18
TGFBR1-201ENST00000374990 FAM114A1Q8IWE2 563 aa22.44■■□□□ 1.18
TGFBR1-201ENST00000374990 USP19O94966 1318 aa22.43■■□□□ 1.18
TGFBR1-201ENST00000374990 PLBD2Q8NHP8 589 aa22.43■■□□□ 1.18
TGFBR1-201ENST00000374990 SLC4A4Q9Y6R1 1079 aa22.43■■□□□ 1.18
TGFBR1-201ENST00000374990 ERVK-7P63135 1459 aa22.43■■□□□ 1.18
TGFBR1-201ENST00000374990 TMEM132AQ24JP5 1023 aa22.43■■□□□ 1.18
TGFBR1-201ENST00000374990 EYA2O00167 538 aa22.43■■□□□ 1.18
TGFBR1-201ENST00000374990 PNMA6EA0A0J9YXQ4 647 aa22.42■■□□□ 1.18
TGFBR1-201ENST00000374990 KIAA0754O94854 1291 aa22.42■■□□□ 1.18
TGFBR1-201ENST00000374990 MTIF2P46199 727 aaKnown RBP22.42■■□□□ 1.18
TGFBR1-201ENST00000374990 NGLY1Q96IV0 654 aa22.42■■□□□ 1.18
TGFBR1-201ENST00000374990 CTAGE1Q96RT6 745 aa22.42■■□□□ 1.18
TGFBR1-201ENST00000374990 KDM6BO15054 1643 aa22.42■■□□□ 1.18
TGFBR1-201ENST00000374990 ZNF445P59923 1031 aa22.42■■□□□ 1.18
TGFBR1-201ENST00000374990 LRRC27Q9C0I9 530 aa22.42■■□□□ 1.18
TGFBR1-201ENST00000374990 CCDC96Q2M329 555 aa22.42■■□□□ 1.18
TGFBR1-201ENST00000374990 MYOM2P54296 1465 aa22.42■■□□□ 1.18
TGFBR1-201ENST00000374990 N4BP3O15049 544 aa22.42■■□□□ 1.18
TGFBR1-201ENST00000374990 GSTO1P78417 241 aa22.42■■□□□ 1.18
TGFBR1-201ENST00000374990 TTC12Q9H892 705 aaPredicted RBP22.42■■□□□ 1.18
TGFBR1-201ENST00000374990 TMEM2Q9UHN6 1383 aa22.41■■□□□ 1.18
TGFBR1-201ENST00000374990 TNIP1Q15025 636 aa22.41■■□□□ 1.18
TGFBR1-201ENST00000374990 TM6SF1Q9BZW5 370 aa22.41■■□□□ 1.18
TGFBR1-201ENST00000374990 TRIM75PA6NK02 468 aa22.41■■□□□ 1.18
TGFBR1-201ENST00000374990 LLPHQ9BRT6 129 aaKnown RBP22.41■■□□□ 1.18
TGFBR1-201ENST00000374990 PATL2C9JE40 543 aaKnown RBP22.41■■□□□ 1.18
TGFBR1-201ENST00000374990 IFIT1BQ5T764 474 aaKnown RBP22.41■■□□□ 1.18
TGFBR1-201ENST00000374990 NLRP3Q96P20 1036 aa22.41■■□□□ 1.18
TGFBR1-201ENST00000374990 SNX14Q9Y5W7 946 aa22.41■■□□□ 1.18
TGFBR1-201ENST00000374990 CALM1P0DP23 149 aa22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 CALM2P0DP24 149 aa22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 CALM3P0DP25 149 aa22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 CCDC191Q8NCU4 936 aa22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 RPS6KB1P23443 525 aa22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 PCDH11XQ9BZA7 1347 aa22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 PCDH11YQ9BZA8 1340 aa22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 IDEP14735 1019 aa22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 GNG11P61952 73 aa22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 APOBRQ0VD83 1088 aa22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 RTL1A6NKG5 1358 aa22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 AATKQ6ZMQ8 1374 aa22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 C6orf229H3BNL8 230 aa22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 ISM2Q6H9L7 571 aa22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 NAA16Q6N069 864 aaPredicted RBP22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 STX8Q9UNK0 236 aa22.4■■□□□ 1.18
TGFBR1-201ENST00000374990 PRKCSHP14314 528 aaPredicted RBP22.39■■□□□ 1.18
TGFBR1-201ENST00000374990 NBPF6Q5VWK0 638 aa22.39■■□□□ 1.18
TGFBR1-201ENST00000374990 NBPF5PQ86XG9 351 aaPredicted RBP22.39■■□□□ 1.18
TGFBR1-201ENST00000374990 SSH3Q8TE77 659 aa22.39■■□□□ 1.18
TGFBR1-201ENST00000374990 NBPF4Q96M43 638 aa22.39■■□□□ 1.18
TGFBR1-201ENST00000374990 TNNI3KQ59H18 835 aa22.39■■□□□ 1.17
TGFBR1-201ENST00000374990 FPGT-TNNI3KV9GXZ4 949 aa22.39■■□□□ 1.17
TGFBR1-201ENST00000374990 HSPA4P34932 840 aa22.39■■□□□ 1.17
TGFBR1-201ENST00000374990 AOPEPQ8N6M6 819 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms