RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 AACSQ86V21 672 aa13.11□□□□□ -0.31
CCDC40-203ENST00000374877 KLHL34Q8N239 644 aa13.11□□□□□ -0.31
CCDC40-203ENST00000374877 TNNT1P13805 278 aa13.1□□□□□ -0.31
CCDC40-203ENST00000374877 TTC5Q8N0Z6 440 aa13.1□□□□□ -0.31
CCDC40-203ENST00000374877 TOGARAM1Q9Y4F4 1720 aa13.1□□□□□ -0.31
CCDC40-203ENST00000374877 C9orf78Q9NZ63 289 aaPredicted RBP13.1□□□□□ -0.31
CCDC40-203ENST00000374877 NCBP1Q09161 790 aaKnown RBP13.1□□□□□ -0.31
CCDC40-203ENST00000374877 BLOC1S2Q6QNY1 142 aa13.1□□□□□ -0.31
CCDC40-203ENST00000374877 EVI5LQ96CN4 794 aa13.1□□□□□ -0.31
CCDC40-203ENST00000374877 FMNL2Q96PY5 1086 aa13.1□□□□□ -0.31
CCDC40-203ENST00000374877 SCAND2PQ9GZW5 306 aaPredicted RBP13.1□□□□□ -0.31
CCDC40-203ENST00000374877 DNAJC25Q9H1X3 360 aa13.1□□□□□ -0.31
CCDC40-203ENST00000374877 ELP1O95163 1332 aa13.09□□□□□ -0.31
CCDC40-203ENST00000374877 USP42Q9H9J4 1324 aaKnown RBP13.09□□□□□ -0.31
CCDC40-203ENST00000374877 PSMA5P28066 241 aa13.09□□□□□ -0.31
CCDC40-203ENST00000374877 NMIQ13287 307 aaPredicted RBP13.09□□□□□ -0.31
CCDC40-203ENST00000374877 DDB1Q16531 1140 aa13.09□□□□□ -0.31
CCDC40-203ENST00000374877 ZNF592Q92610 1267 aa13.09□□□□□ -0.31
CCDC40-203ENST00000374877 USP21Q9UK80 565 aa13.09□□□□□ -0.31
CCDC40-203ENST00000374877 CACNA1FO60840 1977 aa13.09□□□□□ -0.31
CCDC40-203ENST00000374877 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.09□□□□□ -0.31
CCDC40-203ENST00000374877 ZNF165P49910 485 aa13.09□□□□□ -0.31
CCDC40-203ENST00000374877 ZNF75DP51815 510 aa13.09□□□□□ -0.31
CCDC40-203ENST00000374877 TPD52L1Q16890 204 aaPredicted RBP13.09□□□□□ -0.31
CCDC40-203ENST00000374877 MEX3CQ5U5Q3 659 aaKnown RBP13.09□□□□□ -0.31
CCDC40-203ENST00000374877 ZSCAN25Q6NSZ9 544 aa13.09□□□□□ -0.31
CCDC40-203ENST00000374877 DDX19AQ9NUU7 478 aaKnown RBP13.09□□□□□ -0.31
CCDC40-203ENST00000374877 SLC27A2O14975 620 aa13.09□□□□□ -0.31
CCDC40-203ENST00000374877 CCDC9Q9Y3X0 531 aaKnown RBP13.09□□□□□ -0.31
CCDC40-203ENST00000374877 UBR2Q8IWV8 1755 aa13.08□□□□□ -0.31
CCDC40-203ENST00000374877 LEO1Q8WVC0 666 aaPredicted RBP13.08□□□□□ -0.32
CCDC40-203ENST00000374877 CLIP2Q9UDT6 1046 aa13.08□□□□□ -0.32
CCDC40-203ENST00000374877 GLI3P10071 1580 aa13.08□□□□□ -0.32
CCDC40-203ENST00000374877 SMTNL1A8MU46 457 aa13.08□□□□□ -0.32
CCDC40-203ENST00000374877 NR1I2O75469 434 aa13.08□□□□□ -0.32
CCDC40-203ENST00000374877 SNRPA1P09661 255 aaKnown RBP13.08□□□□□ -0.32
CCDC40-203ENST00000374877 NAA30Q147X3 362 aaPredicted RBP13.08□□□□□ -0.32
CCDC40-203ENST00000374877 KCNB2Q92953 911 aa13.08□□□□□ -0.32
CCDC40-203ENST00000374877 CCDC8Q9H0W5 538 aaPredicted RBP13.08□□□□□ -0.32
CCDC40-203ENST00000374877 SLC39A6Q13433 755 aa13.08□□□□□ -0.32
CCDC40-203ENST00000374877 CCDC112Q8NEF3 446 aa13.08□□□□□ -0.32
CCDC40-203ENST00000374877 CLSTN2Q9H4D0 955 aa13.08□□□□□ -0.32
CCDC40-203ENST00000374877 TMOD3Q9NYL9 352 aa13.08□□□□□ -0.32
CCDC40-203ENST00000374877 DBF4Q9UBU7 674 aaPredicted RBP13.08□□□□□ -0.32
CCDC40-203ENST00000374877 KCPQ6ZWJ8 1503 aa13.07□□□□□ -0.32
CCDC40-203ENST00000374877 RNF20Q5VTR2 975 aa13.07□□□□□ -0.32
CCDC40-203ENST00000374877 MAP4K1Q92918 833 aa13.07□□□□□ -0.32
CCDC40-203ENST00000374877 ZNF496Q96IT1 587 aaPredicted RBP13.07□□□□□ -0.32
CCDC40-203ENST00000374877 FSD1Q9BTV5 496 aa13.07□□□□□ -0.32
CCDC40-203ENST00000374877 TAF6LQ9Y6J9 622 aa13.07□□□□□ -0.32
CCDC40-203ENST00000374877 ATRNO75882 1429 aa13.07□□□□□ -0.32
CCDC40-203ENST00000374877 CACTINQ8WUQ7 758 aaKnown RBP13.07□□□□□ -0.32
CCDC40-203ENST00000374877 KIF20AO95235 890 aa13.06□□□□□ -0.32
CCDC40-203ENST00000374877 ANKRD1Q15327 319 aa13.06□□□□□ -0.32
CCDC40-203ENST00000374877 PLA2G4DQ86XP0 818 aa13.06□□□□□ -0.32
CCDC40-203ENST00000374877 ERC1Q8IUD2 1116 aa13.06□□□□□ -0.32
CCDC40-203ENST00000374877 BOLA2Q9H3K6 86 aa13.06□□□□□ -0.32
CCDC40-203ENST00000374877 THSD7AQ9UPZ6 1657 aa13.06□□□□□ -0.32
CCDC40-203ENST00000374877 A0A0D9SFI3 127 aa13.06□□□□□ -0.32
CCDC40-203ENST00000374877 FEZ1Q99689 392 aa13.06□□□□□ -0.32
CCDC40-203ENST00000374877 BCL9O00512 1426 aa13.06□□□□□ -0.32
CCDC40-203ENST00000374877 PDIA4P13667 645 aaKnown RBP13.06□□□□□ -0.32
CCDC40-203ENST00000374877 CEBPZQ03701 1054 aaKnown RBP13.06□□□□□ -0.32
CCDC40-203ENST00000374877 TDRD7Q8NHU6 1098 aaKnown RBP13.06□□□□□ -0.32
CCDC40-203ENST00000374877 MAP3K2Q9Y2U5 619 aa13.06□□□□□ -0.32
CCDC40-203ENST00000374877 LAMB4A4D0S4 1761 aa13.06□□□□□ -0.32
CCDC40-203ENST00000374877 AFF2P51816 1311 aa13.06□□□□□ -0.32
CCDC40-203ENST00000374877 GOLGA6L19H0YKK7 550 aa13.05□□□□□ -0.32
CCDC40-203ENST00000374877 CWF19L2Q2TBE0 894 aaKnown RBP13.05□□□□□ -0.32
CCDC40-203ENST00000374877 CCDC144BQ3MJ40 725 aa13.05□□□□□ -0.32
CCDC40-203ENST00000374877 CCDC144CPQ8IYA2 1237 aa13.05□□□□□ -0.32
CCDC40-203ENST00000374877 DDX11Q96FC9 970 aa13.05□□□□□ -0.32
CCDC40-203ENST00000374877 C5P01031 1676 aa13.05□□□□□ -0.32
CCDC40-203ENST00000374877 HIP1O00291 1037 aa13.05□□□□□ -0.32
CCDC40-203ENST00000374877 JAK2O60674 1132 aa13.05□□□□□ -0.32
CCDC40-203ENST00000374877 RPS6KB1P23443 525 aa13.05□□□□□ -0.32
CCDC40-203ENST00000374877 ZNF771Q7L3S4 317 aaPredicted RBP13.05□□□□□ -0.32
CCDC40-203ENST00000374877 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.05□□□□□ -0.32
CCDC40-203ENST00000374877 PGBD1Q96JS3 809 aa13.05□□□□□ -0.32
CCDC40-203ENST00000374877 SIL1Q9H173 461 aa13.05□□□□□ -0.32
CCDC40-203ENST00000374877 DDX21Q9NR30 783 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCDC40-203ENST00000374877 ADCY9O60503 1353 aa13.05□□□□□ -0.32
CCDC40-203ENST00000374877 H3BQV1 296 aa13.05□□□□□ -0.32
CCDC40-203ENST00000374877 IFFO2Q5TF58 517 aa13.05□□□□□ -0.32
CCDC40-203ENST00000374877 OGFRQ9NZT2 677 aa13.05□□□□□ -0.32
CCDC40-203ENST00000374877 G3BP1Q13283 466 aaKnown RBP eCLIP13.04□□□□□ -0.32
CCDC40-203ENST00000374877 TOB2Q14106 344 aaPredicted RBP13.04□□□□□ -0.32
CCDC40-203ENST00000374877 EAF2Q96CJ1 260 aaPredicted RBP13.04□□□□□ -0.32
CCDC40-203ENST00000374877 TLR7Q9NYK1 1049 aaKnown RBP13.04□□□□□ -0.32
CCDC40-203ENST00000374877 PAXBP1Q9Y5B6 917 aa13.04□□□□□ -0.32
CCDC40-203ENST00000374877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.04□□□□□ -0.32
CCDC40-203ENST00000374877 HSP90B1P14625 803 aaKnown RBP13.04□□□□□ -0.32
CCDC40-203ENST00000374877 MTX1Q13505 466 aa13.04□□□□□ -0.32
CCDC40-203ENST00000374877 MARCH10Q8NA82 808 aaPredicted RBP13.04□□□□□ -0.32
CCDC40-203ENST00000374877 PIGBQ92521 554 aa13.04□□□□□ -0.32
CCDC40-203ENST00000374877 TRPC5Q9UL62 973 aaPredicted RBP13.04□□□□□ -0.32
CCDC40-203ENST00000374877 FOSBP53539 338 aa13.04□□□□□ -0.32
CCDC40-203ENST00000374877 CEP135Q66GS9 1140 aa13.04□□□□□ -0.32
CCDC40-203ENST00000374877 CTNNA3Q9UI47 895 aa13.04□□□□□ -0.32
CCDC40-203ENST00000374877 N4BP2Q86UW6 1770 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms