RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 PSMD1Q99460 953 aa14.17□□□□□ -0.14
HSPG2-202ENST00000374676 COPRSQ9NQ92 184 aa14.17□□□□□ -0.14
HSPG2-202ENST00000374676 PODXL2Q9NZ53 605 aa14.17□□□□□ -0.14
HSPG2-202ENST00000374676 MINPP1Q9UNW1 487 aa14.17□□□□□ -0.14
HSPG2-202ENST00000374676 CHD4Q14839 1912 aa14.16□□□□□ -0.14
HSPG2-202ENST00000374676 NFKBIEO00221 500 aa14.16□□□□□ -0.14
HSPG2-202ENST00000374676 FKBP4Q02790 459 aaKnown RBP eCLIP14.16□□□□□ -0.14
HSPG2-202ENST00000374676 POLA2Q14181 598 aa14.16□□□□□ -0.14
HSPG2-202ENST00000374676 CEP85Q6P2H3 762 aa14.16□□□□□ -0.14
HSPG2-202ENST00000374676 RTFDC1Q9BY42 306 aaPredicted RBP14.16□□□□□ -0.14
HSPG2-202ENST00000374676 ANKRD2Q9GZV1 360 aa14.16□□□□□ -0.14
HSPG2-202ENST00000374676 RIPOR2Q9Y4F9 1068 aa14.16□□□□□ -0.14
HSPG2-202ENST00000374676 PNMA6EA0A0J9YXQ4 647 aa14.15□□□□□ -0.14
HSPG2-202ENST00000374676 EYA2O00167 538 aa14.15□□□□□ -0.14
HSPG2-202ENST00000374676 GPSM2P81274 684 aa14.15□□□□□ -0.14
HSPG2-202ENST00000374676 DPP8Q6V1X1 898 aaPredicted RBP14.15□□□□□ -0.14
HSPG2-202ENST00000374676 SLC51AQ86UW1 340 aa14.15□□□□□ -0.14
HSPG2-202ENST00000374676 SUPT20HQ8NEM7 779 aa14.15□□□□□ -0.14
HSPG2-202ENST00000374676 KLHDC4Q8TBB5 520 aa14.15□□□□□ -0.14
HSPG2-202ENST00000374676 PUS3Q9BZE2 481 aaKnown RBP14.15□□□□□ -0.14
HSPG2-202ENST00000374676 TAOK3Q9H2K8 898 aa14.15□□□□□ -0.14
HSPG2-202ENST00000374676 CNNM1Q9NRU3 951 aa14.15□□□□□ -0.14
HSPG2-202ENST00000374676 NSFL1CQ9UNZ2 370 aaKnown RBP14.15□□□□□ -0.14
HSPG2-202ENST00000374676 XDHP47989 1333 aa14.15□□□□□ -0.15
HSPG2-202ENST00000374676 DICER1Q9UPY3 1922 aaKnown RBP14.14□□□□□ -0.15
HSPG2-202ENST00000374676 CIAO1O76071 339 aa14.14□□□□□ -0.15
HSPG2-202ENST00000374676 CHRNDQ07001 517 aa14.14□□□□□ -0.15
HSPG2-202ENST00000374676 VPS33BQ9H267 617 aa14.14□□□□□ -0.15
HSPG2-202ENST00000374676 LTBP1Q14766 1721 aa14.14□□□□□ -0.15
HSPG2-202ENST00000374676 MROH5Q6ZUA9 1318 aa14.14□□□□□ -0.15
HSPG2-202ENST00000374676 UTRNP46939 3433 aa14.13□□□□□ -0.15
HSPG2-202ENST00000374676 LRRC24Q50LG9 513 aa14.13□□□□□ -0.15
HSPG2-202ENST00000374676 ATG9AQ7Z3C6 839 aa14.13□□□□□ -0.15
HSPG2-202ENST00000374676 TBC1D16Q8TBP0 767 aa14.13□□□□□ -0.15
HSPG2-202ENST00000374676 ANKIB1Q9P2G1 1089 aa14.13□□□□□ -0.15
HSPG2-202ENST00000374676 PA2G4Q9UQ80 394 aaKnown RBP14.13□□□□□ -0.15
HSPG2-202ENST00000374676 LEMD3Q9Y2U8 911 aa14.13□□□□□ -0.15
HSPG2-202ENST00000374676 A0A1B0GUL6 1792 aa14.12□□□□□ -0.15
HSPG2-202ENST00000374676 HMMRO75330 724 aa14.12□□□□□ -0.15
HSPG2-202ENST00000374676 LMNB1P20700 586 aa14.12□□□□□ -0.15
HSPG2-202ENST00000374676 ATP2B4P23634 1241 aa14.12□□□□□ -0.15
HSPG2-202ENST00000374676 IL15P40933 162 aaPredicted RBP14.12□□□□□ -0.15
HSPG2-202ENST00000374676 RASSF7Q02833 373 aa14.12□□□□□ -0.15
HSPG2-202ENST00000374676 SIRT2Q8IXJ6 389 aa14.12□□□□□ -0.15
HSPG2-202ENST00000374676 POLLQ9UGP5 575 aa14.12□□□□□ -0.15
HSPG2-202ENST00000374676 GGA1Q9UJY5 639 aa14.12□□□□□ -0.15
HSPG2-202ENST00000374676 NOP58Q9Y2X3 529 aaKnown RBP14.12□□□□□ -0.15
HSPG2-202ENST00000374676 C6orf229H3BNL8 230 aa14.11□□□□□ -0.15
HSPG2-202ENST00000374676 PRELPP51888 382 aa14.11□□□□□ -0.15
HSPG2-202ENST00000374676 G3BP1Q13283 466 aaKnown RBP eCLIP14.11□□□□□ -0.15
HSPG2-202ENST00000374676 EXOC6Q8TAG9 804 aa14.11□□□□□ -0.15
HSPG2-202ENST00000374676 EYA3Q99504 573 aa14.11□□□□□ -0.15
HSPG2-202ENST00000374676 DUOX1Q9NRD9 1551 aa14.11□□□□□ -0.15
HSPG2-202ENST00000374676 TAF5LO75529 589 aa14.1□□□□□ -0.15
HSPG2-202ENST00000374676 UFL1O94874 794 aa14.1□□□□□ -0.15
HSPG2-202ENST00000374676 PDE8BO95263 885 aa14.1□□□□□ -0.15
HSPG2-202ENST00000374676 IARSP41252 1262 aaKnown RBP14.1□□□□□ -0.15
HSPG2-202ENST00000374676 UBE4AQ14139 1066 aa14.1□□□□□ -0.15
HSPG2-202ENST00000374676 METTL24Q5JXM2 366 aa14.1□□□□□ -0.15
HSPG2-202ENST00000374676 VGLL2Q8N8G2 317 aa14.1□□□□□ -0.15
HSPG2-202ENST00000374676 HELBQ8NG08 1087 aaPredicted RBP14.1□□□□□ -0.15
HSPG2-202ENST00000374676 SIL1Q9H173 461 aa14.1□□□□□ -0.15
HSPG2-202ENST00000374676 ZNF277Q9NRM2 450 aaPredicted RBP14.1□□□□□ -0.15
HSPG2-202ENST00000374676 PCDHB15Q9Y5E8 787 aa14.1□□□□□ -0.15
HSPG2-202ENST00000374676 ZNF804BA4D1E1 1349 aa14.1□□□□□ -0.15
HSPG2-202ENST00000374676 SURF6O75683 361 aaKnown RBP14.09□□□□□ -0.15
HSPG2-202ENST00000374676 KIAA2012Q0VF49 1180 aa14.09□□□□□ -0.15
HSPG2-202ENST00000374676 WASHC4Q2M389 1173 aa14.09□□□□□ -0.15
HSPG2-202ENST00000374676 C9orf131Q5VYM1 1079 aa14.09□□□□□ -0.15
HSPG2-202ENST00000374676 C15orf52Q6ZUT6 534 aaKnown RBP14.09□□□□□ -0.15
HSPG2-202ENST00000374676 ZC3H12CQ9C0D7 883 aaKnown RBP14.09□□□□□ -0.15
HSPG2-202ENST00000374676 CEP126Q9P2H0 1117 aa14.09□□□□□ -0.15
HSPG2-202ENST00000374676 WTIPA6NIX2 430 aaPredicted RBP14.08□□□□□ -0.16
HSPG2-202ENST00000374676 PPIP5K2O43314 1243 aa14.08□□□□□ -0.16
HSPG2-202ENST00000374676 IRX6P78412 446 aaPredicted RBP14.08□□□□□ -0.16
HSPG2-202ENST00000374676 HSP90AB4PQ58FF6 505 aa14.08□□□□□ -0.16
HSPG2-202ENST00000374676 LARGE2Q8N3Y3 721 aa14.08□□□□□ -0.16
HSPG2-202ENST00000374676 RNF181Q9P0P0 153 aa14.08□□□□□ -0.16
HSPG2-202ENST00000374676 MED23Q9ULK4 1368 aa14.08□□□□□ -0.16
HSPG2-202ENST00000374676 FGFR2P21802 821 aa14.07□□□□□ -0.16
HSPG2-202ENST00000374676 KCNJ4P48050 445 aa14.07□□□□□ -0.16
HSPG2-202ENST00000374676 ZC3H4Q9UPT8 1303 aaKnown RBP14.07□□□□□ -0.16
HSPG2-202ENST00000374676 IRS2Q9Y4H2 1338 aa14.07□□□□□ -0.16
HSPG2-202ENST00000374676 SNAP23O00161 211 aa14.06□□□□□ -0.16
HSPG2-202ENST00000374676 RIMBP2O15034 1052 aa14.06□□□□□ -0.16
HSPG2-202ENST00000374676 SASH1O94885 1247 aa14.06□□□□□ -0.16
HSPG2-202ENST00000374676 PUM3Q15397 648 aaKnown RBP14.06□□□□□ -0.16
HSPG2-202ENST00000374676 AOC3Q16853 763 aa14.06□□□□□ -0.16
HSPG2-202ENST00000374676 ERC1Q8IUD2 1116 aa14.06□□□□□ -0.16
HSPG2-202ENST00000374676 JDP2Q8WYK2 163 aa14.06□□□□□ -0.16
HSPG2-202ENST00000374676 GPR101Q96P66 508 aaPredicted RBP14.06□□□□□ -0.16
HSPG2-202ENST00000374676 DCTPP1Q9H773 170 aa14.06□□□□□ -0.16
HSPG2-202ENST00000374676 GPR108Q9NPR9 543 aa14.06□□□□□ -0.16
HSPG2-202ENST00000374676 RAB11FIP3O75154 756 aa14.05□□□□□ -0.16
HSPG2-202ENST00000374676 TFCP2Q12800 502 aa14.05□□□□□ -0.16
HSPG2-202ENST00000374676 OS9Q13438 667 aaPredicted RBP14.05□□□□□ -0.16
HSPG2-202ENST00000374676 HDAC1Q13547 482 aaPredicted RBP14.05□□□□□ -0.16
HSPG2-202ENST00000374676 TXNRD3Q86VQ6 643 aa14.05□□□□□ -0.16
HSPG2-202ENST00000374676 NIM1KQ8IY84 436 aa14.05□□□□□ -0.16
HSPG2-202ENST00000374676 LPIN2Q92539 896 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms