RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 CNKSR1Q969H4 720 aa21.76■■□□□ 1.07
PFDN6-201ENST00000374606 CHMP3Q9Y3E7 222 aa21.76■■□□□ 1.07
PFDN6-201ENST00000374606 CNTNAP1P78357 1384 aa21.75■■□□□ 1.07
PFDN6-201ENST00000374606 CACNA1SQ13698 1873 aa21.75■■□□□ 1.07
PFDN6-201ENST00000374606 POTEIP0CG38 1075 aa21.75■■□□□ 1.07
PFDN6-201ENST00000374606 POTEJP0CG39 1038 aa21.75■■□□□ 1.07
PFDN6-201ENST00000374606 ST5P78524 1137 aa21.75■■□□□ 1.07
PFDN6-201ENST00000374606 STYK1Q6J9G0 422 aa21.75■■□□□ 1.07
PFDN6-201ENST00000374606 SLX4Q8IY92 1834 aa21.75■■□□□ 1.07
PFDN6-201ENST00000374606 IQCA1LA6NCM1 817 aa21.74■■□□□ 1.07
PFDN6-201ENST00000374606 SLC10A5Q5PT55 438 aa21.73■■□□□ 1.07
PFDN6-201ENST00000374606 PRPF40BQ6NWY9 871 aaKnown RBP21.73■■□□□ 1.07
PFDN6-201ENST00000374606 LDHDQ86WU2 507 aa21.73■■□□□ 1.07
PFDN6-201ENST00000374606 SCN4AP35499 1836 aa21.72■■□□□ 1.07
PFDN6-201ENST00000374606 FOXN1O15353 648 aa21.72■■□□□ 1.07
PFDN6-201ENST00000374606 CSF1RP07333 972 aa21.72■■□□□ 1.07
PFDN6-201ENST00000374606 FAM161AQ3B820 660 aa21.72■■□□□ 1.07
PFDN6-201ENST00000374606 TTLL11Q8NHH1 800 aa21.72■■□□□ 1.07
PFDN6-201ENST00000374606 GCC1Q96CN9 775 aa21.72■■□□□ 1.07
PFDN6-201ENST00000374606 MASTLQ96GX5 879 aa21.72■■□□□ 1.07
PFDN6-201ENST00000374606 PRDM10Q9NQV6 1147 aa21.72■■□□□ 1.07
PFDN6-201ENST00000374606 PASKQ96RG2 1323 aa21.72■■□□□ 1.07
PFDN6-201ENST00000374606 SRGNP10124 158 aa21.71■■□□□ 1.07
PFDN6-201ENST00000374606 SMC5Q8IY18 1101 aa21.71■■□□□ 1.07
PFDN6-201ENST00000374606 CCDC85AQ96PX6 553 aaPredicted RBP21.71■■□□□ 1.07
PFDN6-201ENST00000374606 CCDC57Q2TAC2 916 aa21.7■■□□□ 1.06
PFDN6-201ENST00000374606 CCDC152Q4G0S7 254 aa21.7■■□□□ 1.06
PFDN6-201ENST00000374606 AIDAQ96BJ3 306 aa21.7■■□□□ 1.06
PFDN6-201ENST00000374606 L3MBTL3Q96JM7 780 aaPredicted RBP21.7■■□□□ 1.06
PFDN6-201ENST00000374606 NLRP3Q96P20 1036 aa21.7■■□□□ 1.06
PFDN6-201ENST00000374606 DCTPP1Q9H773 170 aa21.7■■□□□ 1.06
PFDN6-201ENST00000374606 RTL9Q8NET4 1388 aa21.7■■□□□ 1.06
PFDN6-201ENST00000374606 SURF6O75683 361 aaKnown RBP21.69■■□□□ 1.06
PFDN6-201ENST00000374606 IFIT5Q13325 482 aaKnown RBP21.69■■□□□ 1.06
PFDN6-201ENST00000374606 TAF1DQ9H5J8 278 aaPredicted RBP21.69■■□□□ 1.06
PFDN6-201ENST00000374606 GREM2Q9H772 168 aa21.69■■□□□ 1.06
PFDN6-201ENST00000374606 RFX5P48382 616 aaPredicted RBP21.68■■□□□ 1.06
PFDN6-201ENST00000374606 CTCFP49711 727 aaPredicted RBP21.68■■□□□ 1.06
PFDN6-201ENST00000374606 SF3B3Q15393 1217 aaKnown RBP21.68■■□□□ 1.06
PFDN6-201ENST00000374606 CCDC93Q567U6 631 aa21.68■■□□□ 1.06
PFDN6-201ENST00000374606 TAF7LQ5H9L4 462 aa21.68■■□□□ 1.06
PFDN6-201ENST00000374606 EXOC6BQ9Y2D4 811 aa21.68■■□□□ 1.06
PFDN6-201ENST00000374606 ANKRD18BA2A2Z9 1011 aa21.67■■□□□ 1.06
PFDN6-201ENST00000374606 TMEM88BA6NKF7 163 aa21.67■■□□□ 1.06
PFDN6-201ENST00000374606 ITGA6P23229 1130 aa21.67■■□□□ 1.06
PFDN6-201ENST00000374606 HSP90AB4PQ58FF6 505 aa21.67■■□□□ 1.06
PFDN6-201ENST00000374606 C3orf67Q6ZVT6 689 aa21.67■■□□□ 1.06
PFDN6-201ENST00000374606 COPRSQ9NQ92 184 aa21.67■■□□□ 1.06
PFDN6-201ENST00000374606 PA2G4Q9UQ80 394 aaKnown RBP21.67■■□□□ 1.06
PFDN6-201ENST00000374606 SPEF2Q9C093 1822 aa21.66■■□□□ 1.06
PFDN6-201ENST00000374606 VEGFBP49765 207 aa21.66■■□□□ 1.06
PFDN6-201ENST00000374606 OS9Q13438 667 aaPredicted RBP21.66■■□□□ 1.06
PFDN6-201ENST00000374606 KLHDC4Q8TBB5 520 aa21.66■■□□□ 1.06
PFDN6-201ENST00000374606 NOP58Q9Y2X3 529 aaKnown RBP21.66■■□□□ 1.06
PFDN6-201ENST00000374606 PTPN12Q05209 780 aaKnown RBP21.65■■□□□ 1.06
PFDN6-201ENST00000374606 EAPPQ56P03 285 aaPredicted RBP21.65■■□□□ 1.06
PFDN6-201ENST00000374606 SIL1Q9H173 461 aa21.65■■□□□ 1.06
PFDN6-201ENST00000374606 ZBTB47Q9UFB7 747 aaPredicted RBP21.65■■□□□ 1.06
PFDN6-201ENST00000374606 APBB1O00213 710 aa21.64■■□□□ 1.05
PFDN6-201ENST00000374606 ITGBL1O95965 494 aaPredicted RBP21.64■■□□□ 1.05
PFDN6-201ENST00000374606 G3BP1Q13283 466 aaKnown RBP eCLIP21.64■■□□□ 1.05
PFDN6-201ENST00000374606 ERC1Q8IUD2 1116 aa21.64■■□□□ 1.05
PFDN6-201ENST00000374606 C7orf43Q8WVR3 580 aa21.64■■□□□ 1.05
PFDN6-201ENST00000374606 HACL1Q9UJ83 578 aa21.64■■□□□ 1.05
PFDN6-201ENST00000374606 ZNF541Q9H0D2 1346 aa21.63■■□□□ 1.05
PFDN6-201ENST00000374606 RAB11FIP3O75154 756 aa21.63■■□□□ 1.05
PFDN6-201ENST00000374606 NPR1P16066 1061 aa21.63■■□□□ 1.05
PFDN6-201ENST00000374606 FKBP4Q02790 459 aaKnown RBP eCLIP21.63■■□□□ 1.05
PFDN6-201ENST00000374606 ZNF594Q96JF6 807 aaPredicted RBP21.63■■□□□ 1.05
PFDN6-201ENST00000374606 CDC5LQ99459 802 aaKnown RBP21.63■■□□□ 1.05
PFDN6-201ENST00000374606 ANKRD45Q5TZF3 282 aa21.62■■□□□ 1.05
PFDN6-201ENST00000374606 RPGRQ92834 1020 aaKnown RBP21.62■■□□□ 1.05
PFDN6-201ENST00000374606 FBXO3Q9UK99 471 aa21.62■■□□□ 1.05
PFDN6-201ENST00000374606 CLEC11AQ9Y240 323 aa21.62■■□□□ 1.05
PFDN6-201ENST00000374606 ADAMTSL1Q8N6G6 1762 aa21.61■■□□□ 1.05
PFDN6-201ENST00000374606 CIAO1O76071 339 aa21.61■■□□□ 1.05
PFDN6-201ENST00000374606 EPHX2P34913 555 aa21.61■■□□□ 1.05
PFDN6-201ENST00000374606 NUCB1Q02818 461 aa21.61■■□□□ 1.05
PFDN6-201ENST00000374606 CRY2Q49AN0 593 aa21.61■■□□□ 1.05
PFDN6-201ENST00000374606 KIF1BPQ96EK5 621 aa21.61■■□□□ 1.05
PFDN6-201ENST00000374606 LRRCC1Q9C099 1032 aa21.61■■□□□ 1.05
PFDN6-201ENST00000374606 SEC31BQ9NQW1 1179 aa21.61■■□□□ 1.05
PFDN6-201ENST00000374606 ZNF277Q9NRM2 450 aaPredicted RBP21.61■■□□□ 1.05
PFDN6-201ENST00000374606 WBP1LQ9NX94 342 aa21.61■■□□□ 1.05
PFDN6-201ENST00000374606 EYA2O00167 538 aa21.6■■□□□ 1.05
PFDN6-201ENST00000374606 IGHMBP2P38935 993 aaKnown RBP21.6■■□□□ 1.05
PFDN6-201ENST00000374606 DDX46Q7L014 1031 aaKnown RBP21.6■■□□□ 1.05
PFDN6-201ENST00000374606 RTKN2Q8IZC4 609 aa21.6■■□□□ 1.05
PFDN6-201ENST00000374606 TAF1P21675 1872 aa21.6■■□□□ 1.05
PFDN6-201ENST00000374606 COL4A1P02462 1669 aa21.6■■□□□ 1.05
PFDN6-201ENST00000374606 KLRG2A4D1S0 409 aaPredicted RBP21.59■■□□□ 1.05
PFDN6-201ENST00000374606 IL15P40933 162 aaPredicted RBP21.59■■□□□ 1.05
PFDN6-201ENST00000374606 LBX1P52954 281 aa21.59■■□□□ 1.05
PFDN6-201ENST00000374606 PNMA8AQ86V59 439 aaPredicted RBP21.59■■□□□ 1.05
PFDN6-201ENST00000374606 CHD1LQ86WJ1 897 aa21.59■■□□□ 1.05
PFDN6-201ENST00000374606 ANKRD18AQ8IVF6 992 aa21.59■■□□□ 1.05
PFDN6-201ENST00000374606 RHPN1Q8TCX5 695 aa21.59■■□□□ 1.05
PFDN6-201ENST00000374606 MPHOSPH8Q99549 860 aa21.59■■□□□ 1.05
PFDN6-201ENST00000374606 RASSF10A6NK89 507 aa21.58■■□□□ 1.05
PFDN6-201ENST00000374606 LDHAL6AQ6ZMR3 332 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms