RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 NOLC1Q14978 699 aaKnown RBP eCLIP20.12■□□□□ 0.819e-9■□□□□ 9.2
PHF1-202ENST00000374516 PRPF40BQ6NWY9 871 aaKnown RBP20.12■□□□□ 0.81
PHF1-202ENST00000374516 DZIP3Q86Y13 1208 aaKnown RBP20.12■□□□□ 0.81
PHF1-202ENST00000374516 C8orf37Q96NL8 207 aa20.12■□□□□ 0.81
PHF1-202ENST00000374516 USP25Q9UHP3 1055 aa20.12■□□□□ 0.81
PHF1-202ENST00000374516 LRP6O75581 1613 aa20.12■□□□□ 0.81
PHF1-202ENST00000374516 DOT1LQ8TEK3 1739 aa20.12■□□□□ 0.81
PHF1-202ENST00000374516 HIP1O00291 1037 aa20.11■□□□□ 0.81
PHF1-202ENST00000374516 CPA1P15085 419 aa20.11■□□□□ 0.81
PHF1-202ENST00000374516 FAM98CQ17RN3 349 aaKnown RBP20.11■□□□□ 0.81
PHF1-202ENST00000374516 CCDC183Q5T5S1 534 aa20.11■□□□□ 0.81
PHF1-202ENST00000374516 KCNQ2O43526 872 aa20.11■□□□□ 0.81
PHF1-202ENST00000374516 PRIMPOLQ96LW4 560 aa20.11■□□□□ 0.81
PHF1-202ENST00000374516 ARID3AQ99856 593 aa20.11■□□□□ 0.81
PHF1-202ENST00000374516 NRAPQ86VF7 1730 aa20.11■□□□□ 0.81
PHF1-202ENST00000374516 ADCY5O95622 1261 aa20.1■□□□□ 0.81
PHF1-202ENST00000374516 DDX46Q7L014 1031 aaKnown RBP20.1■□□□□ 0.81
PHF1-202ENST00000374516 NGLY1Q96IV0 654 aa20.1■□□□□ 0.81
PHF1-202ENST00000374516 LARP6Q9BRS8 491 aaKnown RBP20.1■□□□□ 0.81
PHF1-202ENST00000374516 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.1■□□□□ 0.81
PHF1-202ENST00000374516 CCDC171Q6TFL3 1326 aa20.1■□□□□ 0.81
PHF1-202ENST00000374516 WNK3Q9BYP7 1800 aa20.1■□□□□ 0.81
PHF1-202ENST00000374516 LETM1O95202 739 aaPredicted RBP20.1■□□□□ 0.81
PHF1-202ENST00000374516 IL6STP40189 918 aaPredicted RBP20.1■□□□□ 0.81
PHF1-202ENST00000374516 SMAP1Q8IYB5 467 aaPredicted RBP20.1■□□□□ 0.81
PHF1-202ENST00000374516 KCNJ4P48050 445 aa20.09■□□□□ 0.81
PHF1-202ENST00000374516 TRMT112Q9UI30 125 aaKnown RBP20.09■□□□□ 0.81
PHF1-202ENST00000374516 LOC102724428A0A0B4J2F2 783 aa20.09■□□□□ 0.81
PHF1-202ENST00000374516 A0A1B0GUL7 405 aa20.09■□□□□ 0.81
PHF1-202ENST00000374516 SIK1P57059 783 aa20.09■□□□□ 0.81
PHF1-202ENST00000374516 ADCK5Q3MIX3 580 aa20.09■□□□□ 0.81
PHF1-202ENST00000374516 TAF7LQ5H9L4 462 aa20.09■□□□□ 0.81
PHF1-202ENST00000374516 INTS5Q6P9B9 1019 aaKnown RBP20.09■□□□□ 0.81
PHF1-202ENST00000374516 BARGINQ6ZT62 677 aa20.09■□□□□ 0.81
PHF1-202ENST00000374516 ZNF589Q86UQ0 364 aaPredicted RBP20.09■□□□□ 0.81
PHF1-202ENST00000374516 HAUS7Q99871 368 aa20.09■□□□□ 0.81
PHF1-202ENST00000374516 TTC12Q9H892 705 aaPredicted RBP20.09■□□□□ 0.81
PHF1-202ENST00000374516 CNPY2Q9Y2B0 182 aa20.09■□□□□ 0.81
PHF1-202ENST00000374516 SLIT2O94813 1529 aa20.09■□□□□ 0.81
PHF1-202ENST00000374516 CASTP20810 708 aaKnown RBP20.08■□□□□ 0.81
PHF1-202ENST00000374516 HMGN5P82970 282 aaKnown RBP20.08■□□□□ 0.81
PHF1-202ENST00000374516 IFIT5Q13325 482 aaKnown RBP20.08■□□□□ 0.81
PHF1-202ENST00000374516 HSP90AB3PQ58FF7 597 aa20.08■□□□□ 0.81
PHF1-202ENST00000374516 CCDC94Q9BW85 323 aaPredicted RBP20.08■□□□□ 0.81
PHF1-202ENST00000374516 RBM8AQ9Y5S9 174 aaKnown RBP20.08■□□□□ 0.81
PHF1-202ENST00000374516 CIAO1O76071 339 aa20.08■□□□□ 0.8
PHF1-202ENST00000374516 CSF1RP07333 972 aa20.08■□□□□ 0.8
PHF1-202ENST00000374516 CRKLP46109 303 aaKnown RBP20.08■□□□□ 0.8
PHF1-202ENST00000374516 ITPK1Q13572 414 aa20.08■□□□□ 0.8
PHF1-202ENST00000374516 CEP126Q9P2H0 1117 aa20.08■□□□□ 0.8
PHF1-202ENST00000374516 RPAP1Q9BWH6 1393 aaPredicted RBP20.08■□□□□ 0.8
PHF1-202ENST00000374516 ZSCAN22P10073 491 aaPredicted RBP20.07■□□□□ 0.8
PHF1-202ENST00000374516 HCLS1P14317 486 aaPredicted RBP20.07■□□□□ 0.8
PHF1-202ENST00000374516 NECTIN1Q15223 517 aa20.07■□□□□ 0.8
PHF1-202ENST00000374516 MAP4K1Q92918 833 aa20.07■□□□□ 0.8
PHF1-202ENST00000374516 FAM177BA6PVY3 158 aa20.07■□□□□ 0.8
PHF1-202ENST00000374516 GTF2F1P35269 517 aaKnown RBP eCLIP20.07■□□□□ 0.81e-7■□□□□ 11.3
PHF1-202ENST00000374516 UBE2HP62256 183 aa20.07■□□□□ 0.8
PHF1-202ENST00000374516 TTLL11Q8NHH1 800 aa20.07■□□□□ 0.8
PHF1-202ENST00000374516 JAKMIP1Q96N16 626 aaKnown RBP20.07■□□□□ 0.8
PHF1-202ENST00000374516 SEC62Q99442 399 aaKnown RBP20.07■□□□□ 0.8
PHF1-202ENST00000374516 PLA2G12BQ9BX93 195 aa20.07■□□□□ 0.8
PHF1-202ENST00000374516 GREM2Q9H772 168 aa20.07■□□□□ 0.8
PHF1-202ENST00000374516 UBN2Q6ZU65 1347 aa20.06■□□□□ 0.8
PHF1-202ENST00000374516 GOLIM4O00461 696 aa20.06■□□□□ 0.8
PHF1-202ENST00000374516 IRS4O14654 1257 aaPredicted RBP20.06■□□□□ 0.8
PHF1-202ENST00000374516 KDM4AO75164 1064 aa20.06■□□□□ 0.8
PHF1-202ENST00000374516 EIF5P55010 431 aaKnown RBP20.06■□□□□ 0.8
PHF1-202ENST00000374516 GPR108Q9NPR9 543 aa20.06■□□□□ 0.8
PHF1-202ENST00000374516 CCDC87Q9NVE4 849 aa20.06■□□□□ 0.8
PHF1-202ENST00000374516 AK2P54819 239 aa20.05■□□□□ 0.8
PHF1-202ENST00000374516 SLFNL1Q499Z3 407 aa20.05■□□□□ 0.8
PHF1-202ENST00000374516 ERVV-1B6SEH8 477 aa20.05■□□□□ 0.8
PHF1-202ENST00000374516 ITGA6P23229 1130 aa20.05■□□□□ 0.8
PHF1-202ENST00000374516 CREB3L3Q68CJ9 461 aa20.05■□□□□ 0.8
PHF1-202ENST00000374516 TTC14Q96N46 770 aa20.05■□□□□ 0.8
PHF1-202ENST00000374516 SPTLC3Q9NUV7 552 aa20.05■□□□□ 0.8
PHF1-202ENST00000374516 STX6O43752 255 aa20.04■□□□□ 0.8
PHF1-202ENST00000374516 SYT1P21579 422 aa20.04■□□□□ 0.8
PHF1-202ENST00000374516 CCDC129Q6ZRS4 1044 aa20.04■□□□□ 0.8
PHF1-202ENST00000374516 C17orf53Q8N3J3 647 aaPredicted RBP20.04■□□□□ 0.8
PHF1-202ENST00000374516 SNRKQ9NRH2 765 aa20.04■□□□□ 0.8
PHF1-202ENST00000374516 PALLDQ8WX93 1383 aa20.04■□□□□ 0.8
PHF1-202ENST00000374516 ZKSCAN1P17029 563 aaPredicted RBP20.04■□□□□ 0.8
PHF1-202ENST00000374516 ADORA1P30542 326 aa20.04■□□□□ 0.8
PHF1-202ENST00000374516 KCNQ4P56696 695 aa20.04■□□□□ 0.8
PHF1-202ENST00000374516 TPRNQ4KMQ1 711 aa20.04■□□□□ 0.8
PHF1-202ENST00000374516 TSC1Q92574 1164 aa20.04■□□□□ 0.8
PHF1-202ENST00000374516 PAG1Q9NWQ8 432 aa20.04■□□□□ 0.8
PHF1-202ENST00000374516 CDHR2Q9BYE9 1310 aa20.04■□□□□ 0.8
PHF1-202ENST00000374516 MED23Q9ULK4 1368 aa20.04■□□□□ 0.8
PHF1-202ENST00000374516 CTSWP56202 376 aa20.03■□□□□ 0.8
PHF1-202ENST00000374516 COL9A3Q14050 684 aaPredicted RBP20.03■□□□□ 0.8
PHF1-202ENST00000374516 ZNF710Q8N1W2 664 aa20.03■□□□□ 0.8
PHF1-202ENST00000374516 LIMCH1Q9UPQ0 1083 aa20.03■□□□□ 0.8
PHF1-202ENST00000374516 TAF6LQ9Y6J9 622 aa20.03■□□□□ 0.8
PHF1-202ENST00000374516 ZNF609O15014 1411 aa20.03■□□□□ 0.8
PHF1-202ENST00000374516 IFIT1P09914 478 aaKnown RBP20.03■□□□□ 0.8
PHF1-202ENST00000374516 LDHAL6AQ6ZMR3 332 aa20.03■□□□□ 0.8
PHF1-202ENST00000374516 ZNF34Q8IZ26 560 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms