RNA–Protein interactions for RNA: ENST00000373891.2

CHPF-202, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 1,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-202ENST00000373891 SEC31BQ9NQW1 1179 aa26.28■■□□□ 1.8
CHPF-202ENST00000373891 CA12O43570 354 aa26.27■■□□□ 1.8
CHPF-202ENST00000373891 RPS8P62241 208 aaKnown RBP26.27■■□□□ 1.8
CHPF-202ENST00000373891 RIC3Q7Z5B4 369 aa26.27■■□□□ 1.8
CHPF-202ENST00000373891 JARID2Q92833 1246 aaPredicted RBP26.27■■□□□ 1.8
CHPF-202ENST00000373891 EYA3Q99504 573 aa26.27■■□□□ 1.8
CHPF-202ENST00000373891 MCOLN1Q9GZU1 580 aa26.27■■□□□ 1.8
CHPF-202ENST00000373891 PHAXQ9H814 394 aaKnown RBP26.27■■□□□ 1.8
CHPF-202ENST00000373891 ELL2O00472 640 aaPredicted RBP26.26■■□□□ 1.79
CHPF-202ENST00000373891 CCDC85AQ96PX6 553 aaPredicted RBP26.26■■□□□ 1.79
CHPF-202ENST00000373891 AKAP11Q9UKA4 1901 aa26.26■■□□□ 1.79
CHPF-202ENST00000373891 NOGQ13253 232 aa26.25■■□□□ 1.79
CHPF-202ENST00000373891 DCPSQ96C86 337 aaKnown RBP26.25■■□□□ 1.79
CHPF-202ENST00000373891 SPEF2Q9C093 1822 aa26.25■■□□□ 1.79
CHPF-202ENST00000373891 ASTN2O75129 1339 aaPredicted RBP26.24■■□□□ 1.79
CHPF-202ENST00000373891 UFL1O94874 794 aa26.24■■□□□ 1.79
CHPF-202ENST00000373891 GOLGA2Q08379 1002 aa26.24■■□□□ 1.79
CHPF-202ENST00000373891 KIF4BQ2VIQ3 1234 aa26.24■■□□□ 1.79
CHPF-202ENST00000373891 MYD88Q99836 296 aa26.24■■□□□ 1.79
CHPF-202ENST00000373891 GBA2Q9HCG7 927 aaPredicted RBP26.24■■□□□ 1.79
CHPF-202ENST00000373891 PSME4Q14997 1843 aa26.23■■□□□ 1.79
CHPF-202ENST00000373891 G3V3G9 751 aa26.23■■□□□ 1.79
CHPF-202ENST00000373891 RPS12P25398 132 aaKnown RBP26.23■■□□□ 1.79
CHPF-202ENST00000373891 DGKZQ13574 1117 aa26.23■■□□□ 1.79
CHPF-202ENST00000373891 DCAF8Q5TAQ9 597 aa26.23■■□□□ 1.79
CHPF-202ENST00000373891 RGMBQ6NW40 437 aa26.23■■□□□ 1.79
CHPF-202ENST00000373891 ZC3H12CQ9C0D7 883 aaKnown RBP26.23■■□□□ 1.79
CHPF-202ENST00000373891 ANKIB1Q9P2G1 1089 aa26.23■■□□□ 1.79
CHPF-202ENST00000373891 MLLT1Q03111 559 aaPredicted RBP26.22■■□□□ 1.79
CHPF-202ENST00000373891 TRIM28Q13263 835 aaKnown RBP26.22■■□□□ 1.79
CHPF-202ENST00000373891 ZBTB38Q8NAP3 1195 aaPredicted RBP26.22■■□□□ 1.79
CHPF-202ENST00000373891 GGA3Q9NZ52 723 aa26.22■■□□□ 1.79
CHPF-202ENST00000373891 C2orf69Q8N8R5 385 aa26.21■■□□□ 1.79
CHPF-202ENST00000373891 FAM155AB1AL88 458 aaPredicted RBP26.2■■□□□ 1.78
CHPF-202ENST00000373891 VIL1P09327 827 aaKnown RBP26.19■■□□□ 1.78
CHPF-202ENST00000373891 ZNF157P51786 506 aaPredicted RBP26.19■■□□□ 1.78
CHPF-202ENST00000373891 GGA1Q9UJY5 639 aa26.19■■□□□ 1.78
CHPF-202ENST00000373891 MYH3P11055 1940 aa26.18■■□□□ 1.78
CHPF-202ENST00000373891 ZNF853P0CG23 659 aa26.18■■□□□ 1.78
CHPF-202ENST00000373891 KIF23Q02241 960 aaPredicted RBP26.18■■□□□ 1.78
CHPF-202ENST00000373891 SULF1Q8IWU6 871 aa26.18■■□□□ 1.78
CHPF-202ENST00000373891 PODXL2Q9NZ53 605 aa26.18■■□□□ 1.78
CHPF-202ENST00000373891 APAF1O14727 1248 aa26.17■■□□□ 1.78
CHPF-202ENST00000373891 CCDC152Q4G0S7 254 aa26.17■■□□□ 1.78
CHPF-202ENST00000373891 CDCA5Q96FF9 252 aa26.16■■□□□ 1.78
CHPF-202ENST00000373891 PDE8AO60658 829 aa26.15■■□□□ 1.78
CHPF-202ENST00000373891 PCCAP05165 728 aaPredicted RBP26.15■■□□□ 1.78
CHPF-202ENST00000373891 RGS19P49795 217 aa26.15■■□□□ 1.78
CHPF-202ENST00000373891 IFT57Q9NWB7 429 aa26.15■■□□□ 1.78
CHPF-202ENST00000373891 CWC25Q9NXE8 425 aaPredicted RBP26.15■■□□□ 1.78
CHPF-202ENST00000373891 SCAF8Q9UPN6 1271 aaKnown RBP26.15■■□□□ 1.78
CHPF-202ENST00000373891 ANGEL2Q5VTE6 544 aaKnown RBP26.14■■□□□ 1.78
CHPF-202ENST00000373891 C8orf58Q8NAV2 365 aa26.14■■□□□ 1.78
CHPF-202ENST00000373891 CCDC191Q8NCU4 936 aa26.14■■□□□ 1.78
CHPF-202ENST00000373891 CCDC102AQ96A19 550 aa26.14■■□□□ 1.78
CHPF-202ENST00000373891 TRPA1O75762 1119 aa26.13■■□□□ 1.77
CHPF-202ENST00000373891 HSP90B1P14625 803 aaKnown RBP26.13■■□□□ 1.77
CHPF-202ENST00000373891 GNAI1P63096 354 aa26.13■■□□□ 1.77
CHPF-202ENST00000373891 SCARF1Q14162 830 aa26.13■■□□□ 1.77
CHPF-202ENST00000373891 RSBN1LQ6PCB5 846 aaPredicted RBP26.13■■□□□ 1.77
CHPF-202ENST00000373891 ANKRD18AQ8IVF6 992 aa26.13■■□□□ 1.77
CHPF-202ENST00000373891 WTIPA6NIX2 430 aaPredicted RBP26.12■■□□□ 1.77
CHPF-202ENST00000373891 SLC10A3P09131 477 aa26.11■■□□□ 1.77
CHPF-202ENST00000373891 METTL22Q9BUU2 404 aaPredicted RBP26.11■■□□□ 1.77
CHPF-202ENST00000373891 RNF186Q9NXI6 227 aa26.11■■□□□ 1.77
CHPF-202ENST00000373891 XDHP47989 1333 aa26.11■■□□□ 1.77
CHPF-202ENST00000373891 ZNF280AP59817 542 aaPredicted RBP26.1■■□□□ 1.77
CHPF-202ENST00000373891 AGBL3Q8NEM8 1001 aa26.1■■□□□ 1.77
CHPF-202ENST00000373891 MAP3K2Q9Y2U5 619 aa26.1■■□□□ 1.77
CHPF-202ENST00000373891 ZNF646O15015 1829 aaPredicted RBP26.09■■□□□ 1.77
CHPF-202ENST00000373891 TSPYL6Q8N831 410 aa26.09■■□□□ 1.77
CHPF-202ENST00000373891 CSRNP1Q96S65 589 aa26.09■■□□□ 1.77
CHPF-202ENST00000373891 PRKRIP1Q9H875 184 aaPredicted RBP26.09■■□□□ 1.77
CHPF-202ENST00000373891 MYOZ2Q9NPC6 264 aa26.09■■□□□ 1.77
CHPF-202ENST00000373891 PAPPA2Q9BXP8 1791 aa26.08■■□□□ 1.77
CHPF-202ENST00000373891 DDX58O95786 925 aaKnown RBP26.08■■□□□ 1.77
CHPF-202ENST00000373891 MOB2Q70IA6 237 aa26.08■■□□□ 1.77
CHPF-202ENST00000373891 SAGE1Q9NXZ1 904 aa26.08■■□□□ 1.77
CHPF-202ENST00000373891 USP17L8P0C7I0 530 aa26.07■■□□□ 1.76
CHPF-202ENST00000373891 ATP2B4P23634 1241 aa26.07■■□□□ 1.76
CHPF-202ENST00000373891 CTSWP56202 376 aa26.07■■□□□ 1.76
CHPF-202ENST00000373891 CALD1Q05682 793 aaKnown RBP26.07■■□□□ 1.76
CHPF-202ENST00000373891 CCDC30Q5VVM6 783 aa26.07■■□□□ 1.76
CHPF-202ENST00000373891 PRAMEF18Q5VWM3 479 aa26.07■■□□□ 1.76
CHPF-202ENST00000373891 RASAL3Q86YV0 1011 aa26.07■■□□□ 1.76
CHPF-202ENST00000373891 FBXW7Q969H0 707 aa26.07■■□□□ 1.76
CHPF-202ENST00000373891 GMLQ99445 158 aa26.07■■□□□ 1.76
CHPF-202ENST00000373891 MXD3Q9BW11 206 aa26.07■■□□□ 1.76
CHPF-202ENST00000373891 ZNF609O15014 1411 aa26.06■■□□□ 1.76
CHPF-202ENST00000373891 USP17L3A6NCW0 530 aa26.06■■□□□ 1.76
CHPF-202ENST00000373891 USP17L4A6NCW7 530 aa26.06■■□□□ 1.76
CHPF-202ENST00000373891 USP17L1Q7RTZ2 530 aa26.06■■□□□ 1.76
CHPF-202ENST00000373891 PDE4DIPQ5VU43 2346 aa26.05■■□□□ 1.76
CHPF-202ENST00000373891 SLC34A2O95436 690 aa26.05■■□□□ 1.76
CHPF-202ENST00000373891 IGKV5-2P06315 115 aa26.05■■□□□ 1.76
CHPF-202ENST00000373891 CDC5LQ99459 802 aaKnown RBP26.05■■□□□ 1.76
CHPF-202ENST00000373891 GREM2Q9H772 168 aa26.05■■□□□ 1.76
CHPF-202ENST00000373891 TNRC18O15417 2968 aaPredicted RBP26.04■■□□□ 1.76
CHPF-202ENST00000373891 PI4KAP2A4QPH2 592 aa26.04■■□□□ 1.76
CHPF-202ENST00000373891 SOX10P56693 466 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms