RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 NOM1Q5C9Z4 860 aaKnown RBP20.68■□□□□ 0.9
TRAPPC3-203ENST00000373163 COPS6Q7L5N1 327 aa20.68■□□□□ 0.9
TRAPPC3-203ENST00000373163 AIMP1Q12904 312 aaKnown RBP20.67■□□□□ 0.9
TRAPPC3-203ENST00000373163 TSPYL4Q9UJ04 414 aa20.67■□□□□ 0.9
TRAPPC3-203ENST00000373163 PAPPA2Q9BXP8 1791 aa20.67■□□□□ 0.9
TRAPPC3-203ENST00000373163 ZNF280AP59817 542 aaPredicted RBP20.66■□□□□ 0.9
TRAPPC3-203ENST00000373163 MOB2Q70IA6 237 aa20.66■□□□□ 0.9
TRAPPC3-203ENST00000373163 TBC1D16Q8TBP0 767 aa20.66■□□□□ 0.9
TRAPPC3-203ENST00000373163 XAGE3Q8WTP9 111 aa20.66■□□□□ 0.9
TRAPPC3-203ENST00000373163 ZNF428Q96B54 188 aa20.66■□□□□ 0.9
TRAPPC3-203ENST00000373163 NFE2L2Q16236 605 aa20.65■□□□□ 0.9
TRAPPC3-203ENST00000373163 ZC3H12CQ9C0D7 883 aaKnown RBP20.65■□□□□ 0.9
TRAPPC3-203ENST00000373163 G3V3G9 751 aa20.64■□□□□ 0.89
TRAPPC3-203ENST00000373163 UBE2Q2LH0YL09 131 aa20.64■□□□□ 0.89
TRAPPC3-203ENST00000373163 TM4SF4P48230 202 aa20.64■□□□□ 0.89
TRAPPC3-203ENST00000373163 SF3B3Q15393 1217 aaKnown RBP20.64■□□□□ 0.89
TRAPPC3-203ENST00000373163 DCAF8Q5TAQ9 597 aa20.64■□□□□ 0.89
TRAPPC3-203ENST00000373163 PITPNM2Q9BZ72 1349 aa20.63■□□□□ 0.89
TRAPPC3-203ENST00000373163 FKTNO75072 461 aa20.63■□□□□ 0.89
TRAPPC3-203ENST00000373163 RSBN1LQ6PCB5 846 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC3-203ENST00000373163 AGBL3Q8NEM8 1001 aa20.63■□□□□ 0.89
TRAPPC3-203ENST00000373163 PLEKHF1Q96S99 279 aa20.63■□□□□ 0.89
TRAPPC3-203ENST00000373163 ZNF609O15014 1411 aa20.62■□□□□ 0.89
TRAPPC3-203ENST00000373163 NECTIN2Q92692 538 aa20.62■□□□□ 0.89
TRAPPC3-203ENST00000373163 POLR2AP24928 1970 aaKnown RBP20.62■□□□□ 0.89
TRAPPC3-203ENST00000373163 TAF1P21675 1872 aa20.62■□□□□ 0.89
TRAPPC3-203ENST00000373163 DDX60Q8IY21 1712 aaKnown RBP20.61■□□□□ 0.89
TRAPPC3-203ENST00000373163 MKRN3Q13064 507 aaKnown RBP20.61■□□□□ 0.89
TRAPPC3-203ENST00000373163 TTLL12Q14166 644 aaPredicted RBP20.61■□□□□ 0.89
TRAPPC3-203ENST00000373163 FAM89AQ96GI7 184 aa20.61■□□□□ 0.89
TRAPPC3-203ENST00000373163 MYOZ2Q9NPC6 264 aa20.61■□□□□ 0.89
TRAPPC3-203ENST00000373163 SCAF8Q9UPN6 1271 aaKnown RBP20.61■□□□□ 0.89
TRAPPC3-203ENST00000373163 UFL1O94874 794 aa20.6■□□□□ 0.89
TRAPPC3-203ENST00000373163 USP17L8P0C7I0 530 aa20.6■□□□□ 0.89
TRAPPC3-203ENST00000373163 SREBF2Q12772 1141 aa20.6■□□□□ 0.89
TRAPPC3-203ENST00000373163 CFHR5Q9BXR6 569 aa20.6■□□□□ 0.89
TRAPPC3-203ENST00000373163 COL4A1P02462 1669 aa20.6■□□□□ 0.89
TRAPPC3-203ENST00000373163 RPS8P62241 208 aaKnown RBP20.59■□□□□ 0.89
TRAPPC3-203ENST00000373163 PRAMEF18Q5VWM3 479 aa20.59■□□□□ 0.89
TRAPPC3-203ENST00000373163 PODXL2Q9NZ53 605 aa20.59■□□□□ 0.89
TRAPPC3-203ENST00000373163 POTEFA5A3E0 1075 aa20.58■□□□□ 0.89
TRAPPC3-203ENST00000373163 GMLQ99445 158 aa20.58■□□□□ 0.89
TRAPPC3-203ENST00000373163 R3HDMLQ9H3Y0 253 aa20.58■□□□□ 0.89
TRAPPC3-203ENST00000373163 ANKIB1Q9P2G1 1089 aa20.58■□□□□ 0.89
TRAPPC3-203ENST00000373163 GGA1Q9UJY5 639 aa20.58■□□□□ 0.89
TRAPPC3-203ENST00000373163 DLG5Q8TDM6 1919 aa20.58■□□□□ 0.88
TRAPPC3-203ENST00000373163 MAPK8IP3Q9UPT6 1336 aa20.57■□□□□ 0.88
TRAPPC3-203ENST00000373163 FXR1P51114 621 aaKnown RBP eCLIP20.57■□□□□ 0.88
TRAPPC3-203ENST00000373163 INTS3Q68E01 1043 aaKnown RBP20.57■□□□□ 0.88
TRAPPC3-203ENST00000373163 NF2P35240 595 aa20.56■□□□□ 0.88
TRAPPC3-203ENST00000373163 RTL5Q5HYW3 569 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC3-203ENST00000373163 CCER1Q8TC90 406 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC3-203ENST00000373163 ISCA1Q9BUE6 129 aa20.56■□□□□ 0.88
TRAPPC3-203ENST00000373163 BABAM1Q9NWV8 329 aa20.56■□□□□ 0.88
TRAPPC3-203ENST00000373163 TRIM17Q9Y577 477 aa20.56■□□□□ 0.88
TRAPPC3-203ENST00000373163 SCN9AQ15858 1988 aa20.55■□□□□ 0.88
TRAPPC3-203ENST00000373163 ATP5J2-PTCD1G3V325 749 aa20.55■□□□□ 0.88
TRAPPC3-203ENST00000373163 IRS4O14654 1257 aaPredicted RBP20.55■□□□□ 0.88
TRAPPC3-203ENST00000373163 PLBD2Q8NHP8 589 aa20.55■□□□□ 0.88
TRAPPC3-203ENST00000373163 NBPF9Q3BBW0 867 aa20.54■□□□□ 0.88
TRAPPC3-203ENST00000373163 PNNQ9H307 717 aaKnown RBP20.54■□□□□ 0.88
TRAPPC3-203ENST00000373163 USP17L3A6NCW0 530 aa20.53■□□□□ 0.88
TRAPPC3-203ENST00000373163 USP17L4A6NCW7 530 aa20.53■□□□□ 0.88
TRAPPC3-203ENST00000373163 ALDH1A1P00352 501 aa20.53■□□□□ 0.88
TRAPPC3-203ENST00000373163 PTPN12Q05209 780 aaKnown RBP20.53■□□□□ 0.88
TRAPPC3-203ENST00000373163 ANKRD13DQ6ZTN6 518 aa20.53■□□□□ 0.88
TRAPPC3-203ENST00000373163 OTOP1Q7RTM1 612 aa20.53■□□□□ 0.88
TRAPPC3-203ENST00000373163 USP17L1Q7RTZ2 530 aa20.53■□□□□ 0.88
TRAPPC3-203ENST00000373163 CHPF2Q9P2E5 772 aa20.53■□□□□ 0.88
TRAPPC3-203ENST00000373163 ARMC9Q7Z3E5 817 aa20.52■□□□□ 0.88
TRAPPC3-203ENST00000373163 SEC31BQ9NQW1 1179 aa20.52■□□□□ 0.88
TRAPPC3-203ENST00000373163 SPRYD7Q5W111 196 aa20.51■□□□□ 0.87
TRAPPC3-203ENST00000373163 PODNQ7Z5L7 613 aa20.51■□□□□ 0.87
TRAPPC3-203ENST00000373163 PRKG1Q13976 671 aa20.5■□□□□ 0.87
TRAPPC3-203ENST00000373163 WNT10BO00744 389 aa20.49■□□□□ 0.87
TRAPPC3-203ENST00000373163 RIPK4P57078 832 aa20.49■□□□□ 0.87
TRAPPC3-203ENST00000373163 KRT24Q2M2I5 525 aa20.49■□□□□ 0.87
TRAPPC3-203ENST00000373163 OGFOD1Q8N543 542 aa20.49■□□□□ 0.87
TRAPPC3-203ENST00000373163 MKI67P46013 3256 aaKnown RBP20.49■□□□□ 0.87
TRAPPC3-203ENST00000373163 XDHP47989 1333 aa20.49■□□□□ 0.87
TRAPPC3-203ENST00000373163 EN2P19622 333 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC3-203ENST00000373163 IFNL1Q8IU54 200 aa20.48■□□□□ 0.87
TRAPPC3-203ENST00000373163 MANSC4A6NHS7 340 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC3-203ENST00000373163 INHBEP58166 350 aa20.47■□□□□ 0.87
TRAPPC3-203ENST00000373163 TRIM28Q13263 835 aaKnown RBP20.47■□□□□ 0.87
TRAPPC3-203ENST00000373163 LDLRAD1Q5T700 205 aa20.47■□□□□ 0.87
TRAPPC3-203ENST00000373163 HDGFL1Q5TGJ6 251 aa20.47■□□□□ 0.87
TRAPPC3-203ENST00000373163 ZBTB38Q8NAP3 1195 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC3-203ENST00000373163 COLQQ9Y215 455 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC3-203ENST00000373163 PTPN22Q9Y2R2 807 aa20.47■□□□□ 0.87
TRAPPC3-203ENST00000373163 SASH1O94885 1247 aa20.46■□□□□ 0.87
TRAPPC3-203ENST00000373163 HSP90B1P14625 803 aaKnown RBP20.46■□□□□ 0.87
TRAPPC3-203ENST00000373163 ATP2B4P23634 1241 aa20.46■□□□□ 0.87
TRAPPC3-203ENST00000373163 CCDC152Q4G0S7 254 aa20.46■□□□□ 0.87
TRAPPC3-203ENST00000373163 ARMC5Q96C12 935 aa20.46■□□□□ 0.87
TRAPPC3-203ENST00000373163 ERO1AQ96HE7 468 aa20.46■□□□□ 0.87
TRAPPC3-203ENST00000373163 MXD3Q9BW11 206 aa20.46■□□□□ 0.87
TRAPPC3-203ENST00000373163 ANGEL1Q9UNK9 670 aaKnown RBP20.46■□□□□ 0.87
TRAPPC3-203ENST00000373163 LMOD3Q0VAK6 560 aa20.45■□□□□ 0.86
TRAPPC3-203ENST00000373163 DACT2Q5SW24 774 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 245.6 ms