RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 LRRN4CLQ8ND94 238 aa27.89■■■□□ 2.05
CCND3-202ENST00000372988 MAP3K2Q9Y2U5 619 aa27.89■■■□□ 2.05
CCND3-202ENST00000372988 DIP2AQ14689 1571 aa27.88■■■□□ 2.05
CCND3-202ENST00000372988 TULP2O00295 520 aa27.88■■■□□ 2.05
CCND3-202ENST00000372988 CLCN6P51797 869 aa27.88■■■□□ 2.05
CCND3-202ENST00000372988 SCRN1Q12765 414 aa27.88■■■□□ 2.05
CCND3-202ENST00000372988 G3BP1Q13283 466 aaKnown RBP eCLIP27.88■■■□□ 2.05
CCND3-202ENST00000372988 NPHP1O15259 732 aa27.88■■■□□ 2.05
CCND3-202ENST00000372988 ATL3Q6DD88 541 aa27.88■■■□□ 2.05
CCND3-202ENST00000372988 KAZALD1Q96I82 304 aa27.88■■■□□ 2.05
CCND3-202ENST00000372988 NAT10Q9H0A0 1025 aaKnown RBP27.88■■■□□ 2.05
CCND3-202ENST00000372988 TMEM2Q9UHN6 1383 aa27.87■■■□□ 2.05
CCND3-202ENST00000372988 CCDC150Q8NCX0 1101 aa27.87■■■□□ 2.05
CCND3-202ENST00000372988 USP28Q96RU2 1077 aa27.87■■■□□ 2.05
CCND3-202ENST00000372988 TUBB4AP04350 444 aa27.86■■■□□ 2.05
CCND3-202ENST00000372988 ARMCX5Q6P1M9 558 aa27.86■■■□□ 2.05
CCND3-202ENST00000372988 LGR6Q9HBX8 967 aa27.86■■■□□ 2.05
CCND3-202ENST00000372988 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.86■■■□□ 2.05
CCND3-202ENST00000372988 PFKFB2O60825 505 aa27.86■■■□□ 2.05
CCND3-202ENST00000372988 HSP90B1P14625 803 aaKnown RBP27.86■■■□□ 2.05
CCND3-202ENST00000372988 SYT10Q6XYQ8 523 aa27.86■■■□□ 2.05
CCND3-202ENST00000372988 SUCLG2Q96I99 432 aa27.86■■■□□ 2.05
CCND3-202ENST00000372988 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.85■■■□□ 2.05
CCND3-202ENST00000372988 FSIP1Q8NA03 581 aa27.85■■■□□ 2.05
CCND3-202ENST00000372988 NSUN7Q8NE18 718 aaKnown RBP27.85■■■□□ 2.05
CCND3-202ENST00000372988 NGDNQ8NEJ9 315 aaKnown RBP27.85■■■□□ 2.05
CCND3-202ENST00000372988 DBF4Q9UBU7 674 aaPredicted RBP27.85■■■□□ 2.05
CCND3-202ENST00000372988 UTYO14607 1347 aa27.85■■■□□ 2.05
CCND3-202ENST00000372988 MARF1Q9Y4F3 1742 aaKnown RBP27.85■■■□□ 2.05
CCND3-202ENST00000372988 PNMA6AP0CW24 399 aaPredicted RBP27.85■■■□□ 2.05
CCND3-202ENST00000372988 MRC1P22897 1456 aa27.85■■■□□ 2.05
CCND3-202ENST00000372988 PLA2G4AP47712 749 aa27.85■■■□□ 2.05
CCND3-202ENST00000372988 SLC20A2Q08357 652 aa27.85■■■□□ 2.05
CCND3-202ENST00000372988 CWF19L2Q2TBE0 894 aaKnown RBP27.85■■■□□ 2.05
CCND3-202ENST00000372988 KSR2Q6VAB6 950 aa27.85■■■□□ 2.05
CCND3-202ENST00000372988 NLRP6P59044 892 aa27.84■■■□□ 2.05
CCND3-202ENST00000372988 ZNF396Q96N95 335 aaPredicted RBP27.84■■■□□ 2.05
CCND3-202ENST00000372988 BPIFA3Q9BQP9 254 aa27.84■■■□□ 2.05
CCND3-202ENST00000372988 ZRANB2O95218 330 aaKnown RBP eCLIP27.83■■■□□ 2.05
CCND3-202ENST00000372988 USHBP1Q8N6Y0 703 aa27.83■■■□□ 2.05
CCND3-202ENST00000372988 LTV1Q96GA3 475 aaPredicted RBP27.83■■■□□ 2.05
CCND3-202ENST00000372988 NCAPD2Q15021 1401 aa27.83■■■□□ 2.05
CCND3-202ENST00000372988 CTDNEP1O95476 244 aa27.83■■■□□ 2.05
CCND3-202ENST00000372988 MLECQ14165 292 aa27.83■■■□□ 2.05
CCND3-202ENST00000372988 FMR1NBQ8N0W7 255 aaPredicted RBP27.83■■■□□ 2.05
CCND3-202ENST00000372988 BICC1Q9H694 974 aaKnown RBP27.83■■■□□ 2.05
CCND3-202ENST00000372988 SLIT1O75093 1534 aa27.83■■■□□ 2.05
CCND3-202ENST00000372988 ABCC6O95255 1503 aa27.83■■■□□ 2.05
CCND3-202ENST00000372988 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.82■■■□□ 2.04
CCND3-202ENST00000372988 ARHGAP29Q52LW3 1261 aa27.82■■■□□ 2.04
CCND3-202ENST00000372988 ERCC4Q92889 916 aaPredicted RBP27.82■■■□□ 2.04
CCND3-202ENST00000372988 XPO4Q9C0E2 1151 aaKnown RBP27.82■■■□□ 2.04
CCND3-202ENST00000372988 U3KPZ7 1027 aaPredicted RBP27.82■■■□□ 2.04
CCND3-202ENST00000372988 GRM8O00222 908 aa27.81■■■□□ 2.04
CCND3-202ENST00000372988 DHX8Q14562 1220 aaKnown RBP27.81■■■□□ 2.04
CCND3-202ENST00000372988 CYP21A2P08686 494 aa27.8■■■□□ 2.04
CCND3-202ENST00000372988 TMC6Q7Z403 805 aa27.8■■■□□ 2.04
CCND3-202ENST00000372988 ILDR1Q86SU0 546 aaPredicted RBP27.8■■■□□ 2.04
CCND3-202ENST00000372988 EDC3Q96F86 508 aaKnown RBP27.8■■■□□ 2.04
CCND3-202ENST00000372988 PROSER3Q2NL68 480 aa27.8■■■□□ 2.04
CCND3-202ENST00000372988 USP54Q70EL1 1684 aa27.8■■■□□ 2.04
CCND3-202ENST00000372988 PTPDC1A2A3K4 754 aa27.79■■■□□ 2.04
CCND3-202ENST00000372988 CAPN2P17655 700 aa27.79■■■□□ 2.04
CCND3-202ENST00000372988 SFPQP23246 707 aaKnown RBP eCLIP27.79■■■□□ 2.04
CCND3-202ENST00000372988 ME1P48163 572 aa27.79■■■□□ 2.04
CCND3-202ENST00000372988 SYTL4Q96C24 671 aaPredicted RBP27.79■■■□□ 2.04
CCND3-202ENST00000372988 IFNKQ9P0W0 207 aa27.79■■■□□ 2.04
CCND3-202ENST00000372988 UBR1Q8IWV7 1749 aa27.79■■■□□ 2.04
CCND3-202ENST00000372988 MRPS27Q92552 414 aaKnown RBP27.79■■■□□ 2.04
CCND3-202ENST00000372988 ORC3Q9UBD5 711 aaPredicted RBP27.79■■■□□ 2.04
CCND3-202ENST00000372988 RFX7Q2KHR2 1363 aa27.78■■■□□ 2.04
CCND3-202ENST00000372988 PHLPP2Q6ZVD8 1323 aa27.78■■■□□ 2.04
CCND3-202ENST00000372988 BTBD11A6QL63 1104 aa27.78■■■□□ 2.04
CCND3-202ENST00000372988 CDK11BP21127 795 aaKnown RBP27.78■■■□□ 2.04
CCND3-202ENST00000372988 FOSBP53539 338 aa27.78■■■□□ 2.04
CCND3-202ENST00000372988 LINS1Q8NG48 757 aa27.78■■■□□ 2.04
CCND3-202ENST00000372988 LRRC2Q9BYS8 371 aa27.78■■■□□ 2.04
CCND3-202ENST00000372988 RGPD8O14715 1765 aaPredicted RBP27.78■■■□□ 2.04
CCND3-202ENST00000372988 SALL1Q9NSC2 1324 aa27.78■■■□□ 2.04
CCND3-202ENST00000372988 HNRNPH2P55795 449 aaKnown RBP27.77■■■□□ 2.04
CCND3-202ENST00000372988 OSCARQ8IYS5 282 aa27.77■■■□□ 2.04
CCND3-202ENST00000372988 PCDHA7Q9UN72 937 aa27.77■■■□□ 2.04
CCND3-202ENST00000372988 PLEKHG1Q9ULL1 1385 aa27.77■■■□□ 2.04
CCND3-202ENST00000372988 ZNF609O15014 1411 aa27.77■■■□□ 2.04
CCND3-202ENST00000372988 SMC2O95347 1197 aa27.77■■■□□ 2.04
CCND3-202ENST00000372988 ETF1P62495 437 aaKnown RBP27.77■■■□□ 2.04
CCND3-202ENST00000372988 DPCR1Q3MIW9 517 aa27.77■■■□□ 2.04
CCND3-202ENST00000372988 STOX1Q6ZVD7 989 aa27.77■■■□□ 2.04
CCND3-202ENST00000372988 FBXW7Q969H0 707 aa27.77■■■□□ 2.04
CCND3-202ENST00000372988 SIL1Q9H173 461 aa27.77■■■□□ 2.04
CCND3-202ENST00000372988 KIAA1468Q9P260 1216 aa27.77■■■□□ 2.04
CCND3-202ENST00000372988 NEDD4P46934 1319 aa27.77■■■□□ 2.04
CCND3-202ENST00000372988 A0A1W2PQ27 194 aa27.76■■■□□ 2.03
CCND3-202ENST00000372988 A0A1W2PQ64 194 aa27.76■■■□□ 2.03
CCND3-202ENST00000372988 A0A1W2PQD8 194 aa27.76■■■□□ 2.03
CCND3-202ENST00000372988 ATP5JP18859 108 aa27.76■■■□□ 2.03
CCND3-202ENST00000372988 ADALQ6DHV7 355 aa27.76■■■□□ 2.03
CCND3-202ENST00000372988 DNAJC2Q99543 621 aaKnown RBP27.76■■■□□ 2.03
CCND3-202ENST00000372988 TMCO3Q6UWJ1 677 aa27.75■■■□□ 2.03
CCND3-202ENST00000372988 CCDC129Q6ZRS4 1044 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms