RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 TFIP11Q9UBB9 837 aaKnown RBP11.28□□□□□ -0.6
TRERF1-204ENST00000372922 KLF18A0A0U1RQI7 1052 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 AKAP4Q5JQC9 854 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 TTC22Q5TAA0 569 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 PANK2Q9BZ23 570 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 CHPF2Q9P2E5 772 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 BMP2KLQ5H9B9 411 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 MMRN2Q9H8L6 949 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 C6orf50Q9HD87 102 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 TEX14Q8IWB6 1497 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 IL15P40933 162 aaPredicted RBP11.28□□□□□ -0.6
TRERF1-204ENST00000372922 TPTE2Q6XPS3 522 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 LARP6Q9BRS8 491 aaKnown RBP11.28□□□□□ -0.6
TRERF1-204ENST00000372922 IKBKGQ9Y6K9 419 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 TBC1D9Q6ZT07 1266 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 SREK1Q8WXA9 508 aaKnown RBP11.28□□□□□ -0.6
TRERF1-204ENST00000372922 JARID2Q92833 1246 aaPredicted RBP11.28□□□□□ -0.6
TRERF1-204ENST00000372922 RTCBQ9Y3I0 505 aaKnown RBP11.28□□□□□ -0.6
TRERF1-204ENST00000372922 MAGEB6P1A0A0J9YX57 407 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 GNAT2P19087 354 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 RHPN1Q8TCX5 695 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 JDP2Q8WYK2 163 aa11.28□□□□□ -0.6
TRERF1-204ENST00000372922 ZC3H12CQ9C0D7 883 aaKnown RBP11.28□□□□□ -0.6
TRERF1-204ENST00000372922 ALDH1L1O75891 902 aa11.27□□□□□ -0.6
TRERF1-204ENST00000372922 PSMD1Q99460 953 aa11.27□□□□□ -0.6
TRERF1-204ENST00000372922 CTAGE1Q96RT6 745 aa11.27□□□□□ -0.6
TRERF1-204ENST00000372922 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.27□□□□□ -0.6
TRERF1-204ENST00000372922 CCDC160A6NGH7 325 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 KIF4AO95239 1232 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 PLS1Q14651 629 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 COPS6Q7L5N1 327 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 ZNF354CQ86Y25 554 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 FAM83GA6ND36 823 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 SYKP43405 635 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 NAPAP54920 295 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 MCMDC2Q4G0Z9 681 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 SPATA24Q86W54 205 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 EYA3Q99504 573 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 ALG1Q9BT22 464 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 IMPG2Q9BZV3 1241 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 GRM8O00222 908 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 CALM1P0DP23 149 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 CALM2P0DP24 149 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 CALM3P0DP25 149 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.61
TRERF1-204ENST00000372922 RAB11FIP4Q86YS3 637 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 VEZTQ9HBM0 779 aa11.27□□□□□ -0.61
TRERF1-204ENST00000372922 SSFA2P28290 1259 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 UBE2HP62256 183 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 N4BP3O15049 544 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 CCDC175P0C221 793 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 IL2RBP14784 551 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 KIAA0753Q2KHM9 967 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 ZBTB12Q9Y330 459 aaPredicted RBP11.26□□□□□ -0.61
TRERF1-204ENST00000372922 KDM5BQ9UGL1 1544 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 SPDYE3A6NKU9 549 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 RRAGBQ5VZM2 374 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 DZIP3Q86Y13 1208 aaKnown RBP11.26□□□□□ -0.61
TRERF1-204ENST00000372922 WDR66Q8TBY9 1149 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 ARHGAP45Q92619 1136 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 RALGAPBQ86X10 1494 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 RTL9Q8NET4 1388 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 ANKRD2Q9GZV1 360 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 TFCP2L1Q9NZI6 479 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 LMOD1P29536 600 aaPredicted RBP11.26□□□□□ -0.61
TRERF1-204ENST00000372922 MRPS9P82933 396 aaKnown RBP11.26□□□□□ -0.61
TRERF1-204ENST00000372922 SEPT6Q14141 434 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 C20orf194Q5TEA3 1177 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 KCNG4Q8TDN1 519 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 RRP36Q96EU6 259 aaKnown RBP11.26□□□□□ -0.61
TRERF1-204ENST00000372922 WDR7Q9Y4E6 1490 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 KSR2Q6VAB6 950 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 SIRT1Q96EB6 747 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 JADE2Q9NQC1 790 aa11.26□□□□□ -0.61
TRERF1-204ENST00000372922 UHRF1BP1LA0JNW5 1464 aa11.25□□□□□ -0.61
TRERF1-204ENST00000372922 PRPHP41219 470 aa11.25□□□□□ -0.61
TRERF1-204ENST00000372922 PUS7Q96PZ0 661 aaKnown RBP11.25□□□□□ -0.61
TRERF1-204ENST00000372922 SPAG5Q96R06 1193 aa11.25□□□□□ -0.61
TRERF1-204ENST00000372922 SERPINA10Q9UK55 444 aa11.25□□□□□ -0.61
TRERF1-204ENST00000372922 PPIP5K1Q6PFW1 1433 aa11.25□□□□□ -0.61
TRERF1-204ENST00000372922 TNNI2P48788 182 aa11.25□□□□□ -0.61
TRERF1-204ENST00000372922 TRMT1Q9NXH9 659 aaKnown RBP11.25□□□□□ -0.61
TRERF1-204ENST00000372922 TMX1Q9H3N1 280 aa11.25□□□□□ -0.61
TRERF1-204ENST00000372922 KAT6BQ8WYB5 2073 aa11.25□□□□□ -0.61
TRERF1-204ENST00000372922 CALML3P27482 149 aa11.25□□□□□ -0.61
TRERF1-204ENST00000372922 PPP1R14CQ8TAE6 165 aa11.25□□□□□ -0.61
TRERF1-204ENST00000372922 ANXA1P04083 346 aa11.25□□□□□ -0.61
TRERF1-204ENST00000372922 FAM184BQ9ULE4 1060 aa11.25□□□□□ -0.61
TRERF1-204ENST00000372922 AKR1B10O60218 316 aa11.24□□□□□ -0.61
TRERF1-204ENST00000372922 SLC9C2Q5TAH2 1124 aa11.24□□□□□ -0.61
TRERF1-204ENST00000372922 ISM2Q6H9L7 571 aa11.24□□□□□ -0.61
TRERF1-204ENST00000372922 TNPO1Q92973 898 aaKnown RBP11.24□□□□□ -0.61
TRERF1-204ENST00000372922 LRSAM1Q6UWE0 723 aa11.24□□□□□ -0.61
TRERF1-204ENST00000372922 IQSEC3Q9UPP2 1182 aaPredicted RBP11.24□□□□□ -0.61
TRERF1-204ENST00000372922 CYLC1P35663 651 aaPredicted RBP11.24□□□□□ -0.61
TRERF1-204ENST00000372922 ZNF165P49910 485 aa11.24□□□□□ -0.61
TRERF1-204ENST00000372922 LMBR1LQ6UX01 489 aa11.24□□□□□ -0.61
TRERF1-204ENST00000372922 BRF1Q92994 677 aa11.24□□□□□ -0.61
TRERF1-204ENST00000372922 TCHPQ9BT92 498 aa11.24□□□□□ -0.61
TRERF1-204ENST00000372922 SELENOOQ9BVL4 669 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms