RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 CHD1LQ86WJ1 897 aa19.56■□□□□ 0.72
TMEM53-204ENST00000372243 CNKSR1Q969H4 720 aa19.56■□□□□ 0.72
TMEM53-204ENST00000372243 GPR108Q9NPR9 543 aa19.56■□□□□ 0.72
TMEM53-204ENST00000372243 ZBTB47Q9UFB7 747 aaPredicted RBP19.56■□□□□ 0.72
TMEM53-204ENST00000372243 APBB1O00213 710 aa19.55■□□□□ 0.72
TMEM53-204ENST00000372243 CHRNA5P30532 468 aa19.55■□□□□ 0.72
TMEM53-204ENST00000372243 CEP126Q9P2H0 1117 aa19.55■□□□□ 0.72
TMEM53-204ENST00000372243 TFCP2Q12800 502 aa19.54■□□□□ 0.72
TMEM53-204ENST00000372243 ZNF622Q969S3 477 aaKnown RBP eCLIP19.54■□□□□ 0.72
TMEM53-204ENST00000372243 MINPP1Q9UNW1 487 aa19.54■□□□□ 0.72
TMEM53-204ENST00000372243 LRRC37AA6NMS7 1700 aa19.54■□□□□ 0.72
TMEM53-204ENST00000372243 KCNA3P22001 575 aa19.53■□□□□ 0.72
TMEM53-204ENST00000372243 METTL24Q5JXM2 366 aa19.53■□□□□ 0.72
TMEM53-204ENST00000372243 CLASRPQ8N2M8 674 aaKnown RBP19.53■□□□□ 0.72
TMEM53-204ENST00000372243 VGLL2Q8N8G2 317 aa19.53■□□□□ 0.72
TMEM53-204ENST00000372243 A0A1B0GUL6 1792 aa19.53■□□□□ 0.72
TMEM53-204ENST00000372243 PDE8BO95263 885 aa19.53■□□□□ 0.72
TMEM53-204ENST00000372243 DPEP1P16444 411 aa19.53■□□□□ 0.72
TMEM53-204ENST00000372243 CHRNDQ07001 517 aa19.53■□□□□ 0.72
TMEM53-204ENST00000372243 ANKRD2Q9GZV1 360 aa19.53■□□□□ 0.72
TMEM53-204ENST00000372243 AKAP2Q9Y2D5 859 aa19.53■□□□□ 0.72
TMEM53-204ENST00000372243 PPEF1O14829 653 aaPredicted RBP19.52■□□□□ 0.71
TMEM53-204ENST00000372243 SMARCA5O60264 1052 aaPredicted RBP19.52■□□□□ 0.71
TMEM53-204ENST00000372243 SP8Q8IXZ3 490 aa19.52■□□□□ 0.71
TMEM53-204ENST00000372243 LNPKQ9C0E8 428 aa19.52■□□□□ 0.71
TMEM53-204ENST00000372243 IL1RAPL2Q9NP60 686 aa19.52■□□□□ 0.71
TMEM53-204ENST00000372243 A0A0G2JLW4 131 aa19.51■□□□□ 0.71
TMEM53-204ENST00000372243 ATP6V0A2Q9Y487 856 aa19.51■□□□□ 0.71
TMEM53-204ENST00000372243 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.51■□□□□ 0.71
TMEM53-204ENST00000372243 BRCA1P38398 1863 aaKnown RBP19.5■□□□□ 0.71
TMEM53-204ENST00000372243 CACNA1SQ13698 1873 aa19.5■□□□□ 0.71
TMEM53-204ENST00000372243 TNNI3KQ59H18 835 aa19.5■□□□□ 0.71
TMEM53-204ENST00000372243 PRPF40BQ6NWY9 871 aaKnown RBP19.5■□□□□ 0.71
TMEM53-204ENST00000372243 TTLL6Q8N841 843 aa19.5■□□□□ 0.71
TMEM53-204ENST00000372243 PPP1R1BQ9UD71 204 aaPredicted RBP19.5■□□□□ 0.71
TMEM53-204ENST00000372243 FPGT-TNNI3KV9GXZ4 949 aa19.5■□□□□ 0.71
TMEM53-204ENST00000372243 SLX4Q8IY92 1834 aa19.49■□□□□ 0.71
TMEM53-204ENST00000372243 EAF2Q96CJ1 260 aaPredicted RBP19.49■□□□□ 0.71
TMEM53-204ENST00000372243 PIM2Q9P1W9 311 aa19.49■□□□□ 0.71
TMEM53-204ENST00000372243 ZNF609O15014 1411 aa19.49■□□□□ 0.71
TMEM53-204ENST00000372243 PUM3Q15397 648 aaKnown RBP19.49■□□□□ 0.71
TMEM53-204ENST00000372243 TMX4Q9H1E5 349 aaPredicted RBP19.49■□□□□ 0.71
TMEM53-204ENST00000372243 PODXL2Q9NZ53 605 aa19.49■□□□□ 0.71
TMEM53-204ENST00000372243 FGFR2P21802 821 aa19.48■□□□□ 0.71
TMEM53-204ENST00000372243 CC2D2BQ6DHV5 1058 aa19.48■□□□□ 0.71
TMEM53-204ENST00000372243 KLHL34Q8N239 644 aa19.48■□□□□ 0.71
TMEM53-204ENST00000372243 HELBQ8NG08 1087 aaPredicted RBP19.48■□□□□ 0.71
TMEM53-204ENST00000372243 C7orf43Q8WVR3 580 aa19.48■□□□□ 0.71
TMEM53-204ENST00000372243 XDHP47989 1333 aa19.47■□□□□ 0.71
TMEM53-204ENST00000372243 SALL3Q9BXA9 1300 aa19.47■□□□□ 0.71
TMEM53-204ENST00000372243 A0A1B0GUL7 405 aa19.47■□□□□ 0.71
TMEM53-204ENST00000372243 TAF5LO75529 589 aa19.47■□□□□ 0.71
TMEM53-204ENST00000372243 PDE4AP27815 886 aa19.47■□□□□ 0.71
TMEM53-204ENST00000372243 UBE4AQ14139 1066 aa19.47■□□□□ 0.71
TMEM53-204ENST00000372243 ATP2B3Q16720 1220 aa19.47■□□□□ 0.71
TMEM53-204ENST00000372243 AACSQ86V21 672 aa19.47■□□□□ 0.71
TMEM53-204ENST00000372243 LPIN2Q92539 896 aa19.47■□□□□ 0.71
TMEM53-204ENST00000372243 LEMD3Q9Y2U8 911 aa19.47■□□□□ 0.71
TMEM53-204ENST00000372243 LTBP1Q14766 1721 aa19.46■□□□□ 0.71
TMEM53-204ENST00000372243 ARAP2Q8WZ64 1704 aa19.46■□□□□ 0.71
TMEM53-204ENST00000372243 IFIT2P09913 472 aaKnown RBP19.46■□□□□ 0.71
TMEM53-204ENST00000372243 GRIPAP1Q4V328 841 aa19.46■□□□□ 0.71
TMEM53-204ENST00000372243 C16orf71Q8IYS4 520 aaPredicted RBP19.46■□□□□ 0.71
TMEM53-204ENST00000372243 FHDC1Q9C0D6 1143 aaPredicted RBP19.46■□□□□ 0.71
TMEM53-204ENST00000372243 TIMM10P62072 90 aa19.45■□□□□ 0.7
TMEM53-204ENST00000372243 ANKIB1Q9P2G1 1089 aa19.45■□□□□ 0.7
TMEM53-204ENST00000372243 GPSM2P81274 684 aa19.44■□□□□ 0.7
TMEM53-204ENST00000372243 DALRD3Q5D0E6 543 aaKnown RBP19.44■□□□□ 0.7
TMEM53-204ENST00000372243 NSFL1CQ9UNZ2 370 aaKnown RBP19.44■□□□□ 0.7
TMEM53-204ENST00000372243 IFIT1P09914 478 aaKnown RBP19.44■□□□□ 0.7
TMEM53-204ENST00000372243 SLC5A1P13866 664 aa19.44■□□□□ 0.7
TMEM53-204ENST00000372243 ATP2B4P23634 1241 aa19.44■□□□□ 0.7
TMEM53-204ENST00000372243 SOGA3Q5TF21 947 aa19.44■□□□□ 0.7
TMEM53-204ENST00000372243 PLEKHM2Q8IWE5 1019 aa19.44■□□□□ 0.7
TMEM53-204ENST00000372243 NLGN2Q8NFZ4 835 aa19.44■□□□□ 0.7
TMEM53-204ENST00000372243 NEUROD6Q96NK8 337 aa19.44■□□□□ 0.7
TMEM53-204ENST00000372243 CCDC8Q9H0W5 538 aaPredicted RBP19.44■□□□□ 0.7
TMEM53-204ENST00000372243 OSBPL3Q9H4L5 887 aa19.44■□□□□ 0.7
TMEM53-204ENST00000372243 STAP2Q9UGK3 403 aa19.44■□□□□ 0.7
TMEM53-204ENST00000372243 DBNLQ9UJU6 430 aaKnown RBP19.44■□□□□ 0.7
TMEM53-204ENST00000372243 ZNF804BA4D1E1 1349 aa19.44■□□□□ 0.7
TMEM53-204ENST00000372243 SNED1Q8TER0 1413 aa19.43■□□□□ 0.7
TMEM53-204ENST00000372243 MX1P20591 662 aa19.43■□□□□ 0.7
TMEM53-204ENST00000372243 MPNDQ8N594 471 aa19.43■□□□□ 0.7
TMEM53-204ENST00000372243 OTUD7AQ8TE49 926 aaPredicted RBP19.43■□□□□ 0.7
TMEM53-204ENST00000372243 TTC41PQ6P2S7 1318 aa19.43■□□□□ 0.7
TMEM53-204ENST00000372243 KCNJ4P48050 445 aa19.42■□□□□ 0.7
TMEM53-204ENST00000372243 PDE1AP54750 535 aa19.42■□□□□ 0.7
TMEM53-204ENST00000372243 C15orf52Q6ZUT6 534 aaKnown RBP19.42■□□□□ 0.7
TMEM53-204ENST00000372243 SLC51AQ86UW1 340 aa19.42■□□□□ 0.7
TMEM53-204ENST00000372243 XAGE2Q96GT9 111 aa19.42■□□□□ 0.7
TMEM53-204ENST00000372243 GPATCH3Q96I76 525 aa19.42■□□□□ 0.7
TMEM53-204ENST00000372243 DBNDD2Q9BQY9 259 aa19.42■□□□□ 0.7
TMEM53-204ENST00000372243 SYT17Q9BSW7 474 aa19.42■□□□□ 0.7
TMEM53-204ENST00000372243 BCL11AQ9H165 835 aa19.42■□□□□ 0.7
TMEM53-204ENST00000372243 TLR7Q9NYK1 1049 aaKnown RBP19.42■□□□□ 0.7
TMEM53-204ENST00000372243 GGA1Q9UJY5 639 aa19.42■□□□□ 0.7
TMEM53-204ENST00000372243 AOX1Q06278 1338 aa19.42■□□□□ 0.7
TMEM53-204ENST00000372243 TBC1D16Q8TBP0 767 aa19.41■□□□□ 0.7
TMEM53-204ENST00000372243 DUOX1Q9NRD9 1551 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms