RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 A0A0D9SFI3 127 aa13.25□□□□□ -0.29
PTCH2-201ENST00000372192 ISM2Q6H9L7 571 aa13.25□□□□□ -0.29
PTCH2-201ENST00000372192 TRIM22Q8IYM9 498 aa13.25□□□□□ -0.29
PTCH2-201ENST00000372192 SMARCE1Q969G3 411 aa13.25□□□□□ -0.29
PTCH2-201ENST00000372192 NRBP1Q9UHY1 535 aa13.25□□□□□ -0.29
PTCH2-201ENST00000372192 XBP1P17861 261 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 LEKR1Q6ZMV7 388 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 IP6K1Q92551 441 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 IFNKQ9P0W0 207 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 KIDINS220Q9ULH0 1771 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 PPLO60437 1756 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 POLR3GO15318 223 aaPredicted RBP13.24□□□□□ -0.29
PTCH2-201ENST00000372192 ERLIN1O75477 346 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 CASQ1P31415 396 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 UBASH3AP57075 661 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 CCDC70Q6NSX1 233 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 SYT10Q6XYQ8 523 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 SUCLG2Q96I99 432 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 TIGD1Q96MW7 591 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 USP6P35125 1406 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 ATP5J2-PTCD1G3V325 749 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 SPTLC2O15270 562 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 PTCD1O75127 700 aaKnown RBP13.24□□□□□ -0.29
PTCH2-201ENST00000372192 LMOD1P29536 600 aaPredicted RBP13.24□□□□□ -0.29
PTCH2-201ENST00000372192 CEBPAP49715 358 aaPredicted RBP13.24□□□□□ -0.29
PTCH2-201ENST00000372192 NOM1Q5C9Z4 860 aaKnown RBP13.24□□□□□ -0.29
PTCH2-201ENST00000372192 GOLGA6L9A6NEM1 432 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 NAA16Q6N069 864 aaPredicted RBP13.24□□□□□ -0.29
PTCH2-201ENST00000372192 CNNM3Q8NE01 707 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 ERCC4Q92889 916 aaPredicted RBP13.24□□□□□ -0.29
PTCH2-201ENST00000372192 MRFAP1L1Q96HT8 127 aa13.24□□□□□ -0.29
PTCH2-201ENST00000372192 ZNF213O14771 459 aa13.23□□□□□ -0.29
PTCH2-201ENST00000372192 SYKP43405 635 aa13.23□□□□□ -0.29
PTCH2-201ENST00000372192 NECTIN1Q15223 517 aa13.23□□□□□ -0.29
PTCH2-201ENST00000372192 TTLL5Q6EMB2 1281 aa13.23□□□□□ -0.29
PTCH2-201ENST00000372192 KLHDC4Q8TBB5 520 aa13.23□□□□□ -0.29
PTCH2-201ENST00000372192 LRRC59Q96AG4 307 aaKnown RBP13.23□□□□□ -0.29
PTCH2-201ENST00000372192 RNMTO43148 476 aaKnown RBP13.23□□□□□ -0.29
PTCH2-201ENST00000372192 EIF3JO75822 258 aaKnown RBP13.23□□□□□ -0.29
PTCH2-201ENST00000372192 HAND2P61296 217 aa13.23□□□□□ -0.29
PTCH2-201ENST00000372192 LRRC8AQ8IWT6 810 aa13.23□□□□□ -0.29
PTCH2-201ENST00000372192 SRRTQ9BXP5 876 aaKnown RBP13.23□□□□□ -0.29
PTCH2-201ENST00000372192 KLF18A0A0U1RQI7 1052 aa13.23□□□□□ -0.29
PTCH2-201ENST00000372192 A0A1B0GVL5 298 aa13.23□□□□□ -0.29
PTCH2-201ENST00000372192 TFCP2Q12800 502 aa13.23□□□□□ -0.29
PTCH2-201ENST00000372192 AKAP2Q9Y2D5 859 aa13.23□□□□□ -0.29
PTCH2-201ENST00000372192 RPAP1Q9BWH6 1393 aaPredicted RBP13.22□□□□□ -0.29
PTCH2-201ENST00000372192 GTF2F1P35269 517 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTCH2-201ENST00000372192 ELF2Q15723 593 aa13.22□□□□□ -0.29
PTCH2-201ENST00000372192 ARHGAP29Q52LW3 1261 aa13.22□□□□□ -0.29
PTCH2-201ENST00000372192 CCDC129Q6ZRS4 1044 aa13.22□□□□□ -0.29
PTCH2-201ENST00000372192 ANKRD24Q8TF21 1146 aa13.22□□□□□ -0.29
PTCH2-201ENST00000372192 CACTINQ8WUQ7 758 aaKnown RBP13.22□□□□□ -0.29
PTCH2-201ENST00000372192 ZC3H6P61129 1189 aaKnown RBP13.22□□□□□ -0.29
PTCH2-201ENST00000372192 IMPACTQ9P2X3 320 aa13.22□□□□□ -0.29
PTCH2-201ENST00000372192 SYCP1Q15431 976 aa13.22□□□□□ -0.29
PTCH2-201ENST00000372192 ZNF215Q9UL58 517 aaPredicted RBP13.22□□□□□ -0.29
PTCH2-201ENST00000372192 CD163L1Q9NR16 1453 aa13.22□□□□□ -0.29
PTCH2-201ENST00000372192 GNG11P61952 73 aa13.21□□□□□ -0.29
PTCH2-201ENST00000372192 SLC39A6Q13433 755 aa13.21□□□□□ -0.29
PTCH2-201ENST00000372192 RRP12Q5JTH9 1297 aaKnown RBP13.21□□□□□ -0.29
PTCH2-201ENST00000372192 CCDC102BQ68D86 513 aa13.21□□□□□ -0.29
PTCH2-201ENST00000372192 NCOA7Q8NI08 942 aa13.21□□□□□ -0.29
PTCH2-201ENST00000372192 WASF1Q92558 559 aa13.21□□□□□ -0.29
PTCH2-201ENST00000372192 PAG1Q9NWQ8 432 aa13.21□□□□□ -0.29
PTCH2-201ENST00000372192 CRB1P82279 1406 aa13.21□□□□□ -0.29
PTCH2-201ENST00000372192 TNNI3KQ59H18 835 aa13.21□□□□□ -0.29
PTCH2-201ENST00000372192 LMBR1LQ6UX01 489 aa13.21□□□□□ -0.29
PTCH2-201ENST00000372192 CHST3Q7LGC8 479 aa13.21□□□□□ -0.29
PTCH2-201ENST00000372192 FPGT-TNNI3KV9GXZ4 949 aa13.21□□□□□ -0.29
PTCH2-201ENST00000372192 KCNQ3O43525 872 aa13.21□□□□□ -0.29
PTCH2-201ENST00000372192 SNRPA1P09661 255 aaKnown RBP13.21□□□□□ -0.29
PTCH2-201ENST00000372192 TMEM2Q9UHN6 1383 aa13.21□□□□□ -0.3
PTCH2-201ENST00000372192 ARHGEF28Q8N1W1 1705 aaKnown RBP13.21□□□□□ -0.3
PTCH2-201ENST00000372192 RAB11FIP4Q86YS3 637 aa13.21□□□□□ -0.3
PTCH2-201ENST00000372192 BRMS1Q9HCU9 246 aa13.21□□□□□ -0.3
PTCH2-201ENST00000372192 TBX22Q9Y458 520 aa13.21□□□□□ -0.3
PTCH2-201ENST00000372192 MROH1Q8NDA8 1641 aa13.2□□□□□ -0.3
PTCH2-201ENST00000372192 CDC25BP30305 580 aa13.2□□□□□ -0.3
PTCH2-201ENST00000372192 STK11IPQ8N1F8 1099 aa13.2□□□□□ -0.3
PTCH2-201ENST00000372192 EDC3Q96F86 508 aaKnown RBP13.2□□□□□ -0.3
PTCH2-201ENST00000372192 CNNM1Q9NRU3 951 aa13.2□□□□□ -0.3
PTCH2-201ENST00000372192 PIP4K2AP48426 406 aaPredicted RBP13.2□□□□□ -0.3
PTCH2-201ENST00000372192 BRAPQ7Z569 592 aa13.2□□□□□ -0.3
PTCH2-201ENST00000372192 KDRP35968 1356 aa13.2□□□□□ -0.3
PTCH2-201ENST00000372192 ROBO2Q9HCK4 1378 aa13.2□□□□□ -0.3
PTCH2-201ENST00000372192 ATP5JP18859 108 aa13.2□□□□□ -0.3
PTCH2-201ENST00000372192 DBNDD2Q9BQY9 259 aa13.2□□□□□ -0.3
PTCH2-201ENST00000372192 TSPYL1Q9H0U9 437 aa13.2□□□□□ -0.3
PTCH2-201ENST00000372192 SNRKQ9NRH2 765 aa13.2□□□□□ -0.3
PTCH2-201ENST00000372192 MARCKSP29966 332 aaPredicted RBP13.19□□□□□ -0.3
PTCH2-201ENST00000372192 NBPF6Q5VWK0 638 aa13.19□□□□□ -0.3
PTCH2-201ENST00000372192 NBPF4Q96M43 638 aa13.19□□□□□ -0.3
PTCH2-201ENST00000372192 NCOA5Q9HCD5 579 aaKnown RBP13.19□□□□□ -0.3
PTCH2-201ENST00000372192 IDH1O75874 414 aaKnown RBP13.19□□□□□ -0.3
PTCH2-201ENST00000372192 USP28Q96RU2 1077 aa13.19□□□□□ -0.3
PTCH2-201ENST00000372192 HELLSQ9NRZ9 838 aa13.19□□□□□ -0.3
PTCH2-201ENST00000372192 KIF5CO60282 957 aa13.19□□□□□ -0.3
PTCH2-201ENST00000372192 TAF5LO75529 589 aa13.19□□□□□ -0.3
PTCH2-201ENST00000372192 ATP2B3Q16720 1220 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms