RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 FKBP4Q02790 459 aaKnown RBP eCLIP17.15■□□□□ 0.34
LDB3-204ENST00000372066 OLFM4Q6UX06 510 aa17.15■□□□□ 0.34
LDB3-204ENST00000372066 ZNF277Q9NRM2 450 aaPredicted RBP17.15■□□□□ 0.34
LDB3-204ENST00000372066 IQCA1LA6NCM1 817 aa17.14■□□□□ 0.33
LDB3-204ENST00000372066 ANXA1P04083 346 aa17.14■□□□□ 0.33
LDB3-204ENST00000372066 POTEIP0CG38 1075 aa17.14■□□□□ 0.33
LDB3-204ENST00000372066 POTEJP0CG39 1038 aa17.14■□□□□ 0.33
LDB3-204ENST00000372066 ALDH1B1P30837 517 aa17.14■□□□□ 0.33
LDB3-204ENST00000372066 NEXNQ0ZGT2 675 aa17.14■□□□□ 0.33
LDB3-204ENST00000372066 PDIA6Q15084 440 aa17.14■□□□□ 0.33
LDB3-204ENST00000372066 PROSER3Q2NL68 480 aa17.14■□□□□ 0.33
LDB3-204ENST00000372066 RTKN2Q8IZC4 609 aa17.14■□□□□ 0.33
LDB3-204ENST00000372066 RHPN1Q8TCX5 695 aa17.14■□□□□ 0.33
LDB3-204ENST00000372066 SLX4Q8IY92 1834 aa17.13■□□□□ 0.33
LDB3-204ENST00000372066 COL11A2P13942 1736 aaPredicted RBP17.12■□□□□ 0.33
LDB3-204ENST00000372066 TTC41PQ6P2S7 1318 aa17.12■□□□□ 0.33
LDB3-204ENST00000372066 ERVV-1B6SEH8 477 aa17.12■□□□□ 0.33
LDB3-204ENST00000372066 GRM8O00222 908 aa17.12■□□□□ 0.33
LDB3-204ENST00000372066 HSPA1AP0DMV8 641 aaKnown RBP17.12■□□□□ 0.33
LDB3-204ENST00000372066 HSPA1BP0DMV9 641 aaKnown RBP17.12■□□□□ 0.33
LDB3-204ENST00000372066 DDIT3P35638 169 aa17.12■□□□□ 0.33
LDB3-204ENST00000372066 NYXQ9GZU5 481 aa17.12■□□□□ 0.33
LDB3-204ENST00000372066 MYL6BP14649 208 aa17.11■□□□□ 0.33
LDB3-204ENST00000372066 MCCP23508 829 aa17.11■□□□□ 0.33
LDB3-204ENST00000372066 KIF6Q6ZMV9 814 aa17.11■□□□□ 0.33
LDB3-204ENST00000372066 NUTM1Q86Y26 1132 aa17.11■□□□□ 0.33
LDB3-204ENST00000372066 SYNE4Q8N205 404 aa17.11■□□□□ 0.33
LDB3-204ENST00000372066 BCL11AQ9H165 835 aa17.11■□□□□ 0.33
LDB3-204ENST00000372066 TAF1DQ9H5J8 278 aaPredicted RBP17.11■□□□□ 0.33
LDB3-204ENST00000372066 CREBZFQ9NS37 354 aa17.11■□□□□ 0.33
LDB3-204ENST00000372066 TIAM2Q8IVF5 1701 aa17.11■□□□□ 0.33
LDB3-204ENST00000372066 GSE1Q14687 1217 aa17.11■□□□□ 0.33
LDB3-204ENST00000372066 TTLL7Q6ZT98 887 aa17.11■□□□□ 0.33
LDB3-204ENST00000372066 RIC3Q7Z5B4 369 aa17.11■□□□□ 0.33
LDB3-204ENST00000372066 LDHDQ86WU2 507 aa17.11■□□□□ 0.33
LDB3-204ENST00000372066 TNS4Q8IZW8 715 aa17.11■□□□□ 0.33
LDB3-204ENST00000372066 L3MBTL3Q96JM7 780 aaPredicted RBP17.11■□□□□ 0.33
LDB3-204ENST00000372066 ESYT1Q9BSJ8 1104 aa17.11■□□□□ 0.33
LDB3-204ENST00000372066 MKRN1Q9UHC7 482 aaKnown RBP17.11■□□□□ 0.33
LDB3-204ENST00000372066 CCDC88AQ3V6T2 1871 aa17.1■□□□□ 0.33
LDB3-204ENST00000372066 MAP3K15Q6ZN16 1313 aa17.1■□□□□ 0.33
LDB3-204ENST00000372066 FER1L6Q2WGJ9 1857 aa17.1■□□□□ 0.33
LDB3-204ENST00000372066 EAPPQ56P03 285 aaPredicted RBP17.1■□□□□ 0.33
LDB3-204ENST00000372066 METTL22Q9BUU2 404 aaPredicted RBP17.1■□□□□ 0.33
LDB3-204ENST00000372066 ZNF541Q9H0D2 1346 aa17.09■□□□□ 0.33
LDB3-204ENST00000372066 ST18O60284 1047 aa17.09■□□□□ 0.33
LDB3-204ENST00000372066 GPTP24298 496 aa17.09■□□□□ 0.33
LDB3-204ENST00000372066 IARSP41252 1262 aaKnown RBP17.09■□□□□ 0.33
LDB3-204ENST00000372066 ANAPC15P60006 121 aa17.09■□□□□ 0.33
LDB3-204ENST00000372066 GPATCH3Q96I76 525 aa17.09■□□□□ 0.33
LDB3-204ENST00000372066 ZBTB3Q9H5J0 574 aa17.09■□□□□ 0.33
LDB3-204ENST00000372066 CLEC11AQ9Y240 323 aa17.09■□□□□ 0.33
LDB3-204ENST00000372066 BCORQ6W2J9 1755 aa17.08■□□□□ 0.33
LDB3-204ENST00000372066 TRIM6-TRIM34B2RNG4 842 aa17.08■□□□□ 0.32
LDB3-204ENST00000372066 CAPN15O75808 1086 aa17.08■□□□□ 0.32
LDB3-204ENST00000372066 CHMLP26374 656 aa17.08■□□□□ 0.32
LDB3-204ENST00000372066 CLASRPQ8N2M8 674 aaKnown RBP17.08■□□□□ 0.32
LDB3-204ENST00000372066 RPGRQ92834 1020 aaKnown RBP17.08■□□□□ 0.32
LDB3-204ENST00000372066 IL17RAQ96F46 866 aa17.08■□□□□ 0.32
LDB3-204ENST00000372066 HACL1Q9UJ83 578 aa17.08■□□□□ 0.32
LDB3-204ENST00000372066 HSP90AA1P07900 732 aaKnown RBP17.07■□□□□ 0.32
LDB3-204ENST00000372066 PTMSP20962 102 aa17.07■□□□□ 0.32
LDB3-204ENST00000372066 OS9Q13438 667 aaPredicted RBP17.07■□□□□ 0.32
LDB3-204ENST00000372066 CWF19L2Q2TBE0 894 aaKnown RBP17.07■□□□□ 0.32
LDB3-204ENST00000372066 CRY2Q49AN0 593 aa17.07■□□□□ 0.32
LDB3-204ENST00000372066 SUSD4Q5VX71 490 aa17.07■□□□□ 0.32
LDB3-204ENST00000372066 LRP10Q7Z4F1 713 aa17.07■□□□□ 0.32
LDB3-204ENST00000372066 CNTROBQ8N137 903 aa17.07■□□□□ 0.32
LDB3-204ENST00000372066 XAGE3Q8WTP9 111 aa17.07■□□□□ 0.32
LDB3-204ENST00000372066 JDP2Q8WYK2 163 aa17.07■□□□□ 0.32
LDB3-204ENST00000372066 IL1RAPL2Q9NP60 686 aa17.07■□□□□ 0.32
LDB3-204ENST00000372066 NEURL1BA8MQ27 555 aa17.06■□□□□ 0.32
LDB3-204ENST00000372066 FZD9O00144 591 aa17.06■□□□□ 0.32
LDB3-204ENST00000372066 GLRX3O76003 335 aaKnown RBP17.06■□□□□ 0.32
LDB3-204ENST00000372066 EPHX2P34913 555 aa17.06■□□□□ 0.32
LDB3-204ENST00000372066 PI4K2BQ8TCG2 481 aa17.06■□□□□ 0.32
LDB3-204ENST00000372066 RILPL2Q969X0 211 aa17.06■□□□□ 0.32
LDB3-204ENST00000372066 ABCC12Q96J65 1359 aa17.06■□□□□ 0.32
LDB3-204ENST00000372066 DDX11L8A8MPP1 907 aa17.06■□□□□ 0.32
LDB3-204ENST00000372066 IGKV5-2P06315 115 aa17.06■□□□□ 0.32
LDB3-204ENST00000372066 MCM2P49736 904 aa17.06■□□□□ 0.32
LDB3-204ENST00000372066 AIMP1Q12904 312 aaKnown RBP17.06■□□□□ 0.32
LDB3-204ENST00000372066 CC2D2BQ6DHV5 1058 aa17.06■□□□□ 0.32
LDB3-204ENST00000372066 ANKRD13DQ6ZTN6 518 aa17.06■□□□□ 0.32
LDB3-204ENST00000372066 COPS6Q7L5N1 327 aa17.06■□□□□ 0.32
LDB3-204ENST00000372066 SUCLG2Q96I99 432 aa17.06■□□□□ 0.32
LDB3-204ENST00000372066 PSMD1Q99460 953 aa17.06■□□□□ 0.32
LDB3-204ENST00000372066 MCM4P33991 863 aa17.05■□□□□ 0.32
LDB3-204ENST00000372066 GCKRQ14397 625 aa17.05■□□□□ 0.32
LDB3-204ENST00000372066 ZNF34Q8IZ26 560 aa17.05■□□□□ 0.32
LDB3-204ENST00000372066 SPRYD3Q8NCJ5 442 aa17.05■□□□□ 0.32
LDB3-204ENST00000372066 RBM17Q96I25 401 aaKnown RBP17.05■□□□□ 0.32
LDB3-204ENST00000372066 UBN2Q6ZU65 1347 aa17.04■□□□□ 0.32
LDB3-204ENST00000372066 PASKQ96RG2 1323 aa17.04■□□□□ 0.32
LDB3-204ENST00000372066 ITGBL1O95965 494 aaPredicted RBP17.04■□□□□ 0.32
LDB3-204ENST00000372066 HOXA10P31260 410 aaPredicted RBP17.04■□□□□ 0.32
LDB3-204ENST00000372066 GIGYF2Q6Y7W6 1299 aaKnown RBP17.04■□□□□ 0.32
LDB3-204ENST00000372066 PNMA8AQ86V59 439 aaPredicted RBP17.04■□□□□ 0.32
LDB3-204ENST00000372066 PLBD2Q8NHP8 589 aa17.04■□□□□ 0.32
LDB3-204ENST00000372066 DICER1Q9UPY3 1922 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms