RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 IFIT1P09914 478 aaKnown RBP34.41■■■■□ 3.1
SSBP3-204ENST00000371320 CCDC183Q5T5S1 534 aa34.41■■■■□ 3.1
SSBP3-204ENST00000371320 NHSL1Q5SYE7 1610 aa34.4■■■■□ 3.1
SSBP3-204ENST00000371320 PDLIM2Q96JY6 352 aa34.4■■■■□ 3.1
SSBP3-204ENST00000371320 STK3Q13188 491 aa34.39■■■■□ 3.1
SSBP3-204ENST00000371320 PCCAP05165 728 aaPredicted RBP34.39■■■■□ 3.1
SSBP3-204ENST00000371320 RNF214Q8ND24 703 aa34.39■■■■□ 3.1
SSBP3-204ENST00000371320 TPRNQ4KMQ1 711 aa34.38■■■■□ 3.09
SSBP3-204ENST00000371320 ZMYM1Q5SVZ6 1142 aa34.37■■■■□ 3.09
SSBP3-204ENST00000371320 FBXO3Q9UK99 471 aa34.37■■■■□ 3.09
SSBP3-204ENST00000371320 FAM89AQ96GI7 184 aa34.37■■■■□ 3.09
SSBP3-204ENST00000371320 SLFNL1Q499Z3 407 aa34.36■■■■□ 3.09
SSBP3-204ENST00000371320 Q6ZUG5 572 aa34.36■■■■□ 3.09
SSBP3-204ENST00000371320 DSCC1Q9BVC3 393 aa34.36■■■■□ 3.09
SSBP3-204ENST00000371320 LETM1O95202 739 aaPredicted RBP34.35■■■■□ 3.09
SSBP3-204ENST00000371320 CDC37L1Q7L3B6 337 aa34.35■■■■□ 3.09
SSBP3-204ENST00000371320 ZBTB38Q8NAP3 1195 aaPredicted RBP34.35■■■■□ 3.09
SSBP3-204ENST00000371320 PPIL4Q8WUA2 492 aaKnown RBP eCLIP34.35■■■■□ 3.09
SSBP3-204ENST00000371320 PLA2G12BQ9BX93 195 aa34.35■■■■□ 3.09
SSBP3-204ENST00000371320 AKAP2Q9Y2D5 859 aa34.35■■■■□ 3.09
SSBP3-204ENST00000371320 RNF113AO15541 343 aaKnown RBP34.34■■■■□ 3.09
SSBP3-204ENST00000371320 HS1BP3Q53T59 392 aa34.34■■■■□ 3.09
SSBP3-204ENST00000371320 TAF7LQ5H9L4 462 aa34.34■■■■□ 3.09
SSBP3-204ENST00000371320 ZSCAN30Q86W11 494 aa34.34■■■■□ 3.09
SSBP3-204ENST00000371320 MAP3K15Q6ZN16 1313 aa34.34■■■■□ 3.09
SSBP3-204ENST00000371320 HMGB1P09429 215 aaKnown RBP34.33■■■■□ 3.09
SSBP3-204ENST00000371320 GTF3C6Q969F1 213 aa34.33■■■■□ 3.09
SSBP3-204ENST00000371320 CCDC85AQ96PX6 553 aaPredicted RBP34.33■■■■□ 3.09
SSBP3-204ENST00000371320 CCDC158Q5M9N0 1113 aa34.32■■■■□ 3.09
SSBP3-204ENST00000371320 GORABQ5T7V8 394 aa34.32■■■■□ 3.09
SSBP3-204ENST00000371320 HSP90B1P14625 803 aaKnown RBP34.32■■■■□ 3.08
SSBP3-204ENST00000371320 GIGYF2Q6Y7W6 1299 aaKnown RBP34.32■■■■□ 3.08
SSBP3-204ENST00000371320 FERMT3Q86UX7 667 aa34.32■■■■□ 3.08
SSBP3-204ENST00000371320 CSF1RP07333 972 aa34.31■■■■□ 3.08
SSBP3-204ENST00000371320 KRT85P78386 507 aa34.31■■■■□ 3.08
SSBP3-204ENST00000371320 IFIT5Q13325 482 aaKnown RBP34.31■■■■□ 3.08
SSBP3-204ENST00000371320 STOX1Q6ZVD7 989 aa34.31■■■■□ 3.08
SSBP3-204ENST00000371320 FGD1P98174 961 aa34.31■■■■□ 3.08
SSBP3-204ENST00000371320 TTC39AQ5SRH9 613 aa34.31■■■■□ 3.08
SSBP3-204ENST00000371320 FKBP4Q02790 459 aaKnown RBP eCLIP34.3■■■■□ 3.08
SSBP3-204ENST00000371320 XAGE2Q96GT9 111 aa34.3■■■■□ 3.08
SSBP3-204ENST00000371320 MAST3O60307 1309 aa34.29■■■■□ 3.08
SSBP3-204ENST00000371320 HSPD1P10809 573 aaKnown RBP34.29■■■■□ 3.08
SSBP3-204ENST00000371320 ZBTB4Q9P1Z0 1013 aaPredicted RBP34.29■■■■□ 3.08
SSBP3-204ENST00000371320 ADORA1P30542 326 aa34.28■■■■□ 3.08
SSBP3-204ENST00000371320 LRRFIP1Q32MZ4 808 aaKnown RBP34.28■■■■□ 3.08
SSBP3-204ENST00000371320 DHX32Q7L7V1 743 aaKnown RBP34.28■■■■□ 3.08
SSBP3-204ENST00000371320 BRF1Q92994 677 aa34.28■■■■□ 3.08
SSBP3-204ENST00000371320 HLFQ16534 295 aa34.27■■■■□ 3.08
SSBP3-204ENST00000371320 FAM184AQ8NB25 1140 aa34.27■■■■□ 3.08
SSBP3-204ENST00000371320 LRRC2Q9BYS8 371 aa34.27■■■■□ 3.08
SSBP3-204ENST00000371320 SPEF2Q9C093 1822 aa34.27■■■■□ 3.08
SSBP3-204ENST00000371320 DISP2A7MBM2 1401 aa34.27■■■■□ 3.08
SSBP3-204ENST00000371320 JAK2O60674 1132 aa34.26■■■■□ 3.08
SSBP3-204ENST00000371320 GPTP24298 496 aa34.26■■■■□ 3.08
SSBP3-204ENST00000371320 HSP90AB3PQ58FF7 597 aa34.26■■■■□ 3.08
SSBP3-204ENST00000371320 CDHR2Q9BYE9 1310 aa34.26■■■■□ 3.07
SSBP3-204ENST00000371320 BCL9O00512 1426 aa34.26■■■■□ 3.07
SSBP3-204ENST00000371320 NLRP10Q86W26 655 aa34.26■■■■□ 3.07
SSBP3-204ENST00000371320 CYP19A1P11511 503 aaPredicted RBP34.25■■■■□ 3.07
SSBP3-204ENST00000371320 MSNP26038 577 aaKnown RBP34.24■■■■□ 3.07
SSBP3-204ENST00000371320 FAM173BQ6P4H8 233 aa34.24■■■■□ 3.07
SSBP3-204ENST00000371320 SYNE4Q8N205 404 aa34.24■■■■□ 3.07
SSBP3-204ENST00000371320 M0R2C6 588 aa34.24■■■■□ 3.07
SSBP3-204ENST00000371320 TTC6Q86TZ1 520 aa34.24■■■■□ 3.07
SSBP3-204ENST00000371320 SLC4A9Q96Q91 983 aa34.24■■■■□ 3.07
SSBP3-204ENST00000371320 ITGB4P16144 1822 aa34.24■■■■□ 3.07
SSBP3-204ENST00000371320 ELP1O95163 1332 aa34.23■■■■□ 3.07
SSBP3-204ENST00000371320 E7EWF7 191 aa34.23■■■■□ 3.07
SSBP3-204ENST00000371320 KLHL34Q8N239 644 aa34.23■■■■□ 3.07
SSBP3-204ENST00000371320 OSBP2Q969R2 916 aa34.23■■■■□ 3.07
SSBP3-204ENST00000371320 ANO8Q9HCE9 1232 aaPredicted RBP34.23■■■■□ 3.07
SSBP3-204ENST00000371320 EXOC5O00471 708 aa34.22■■■■□ 3.07
SSBP3-204ENST00000371320 SCRN1Q12765 414 aa34.22■■■■□ 3.07
SSBP3-204ENST00000371320 PFKFB2O60825 505 aa34.21■■■■□ 3.07
SSBP3-204ENST00000371320 ZFYP08048 801 aaPredicted RBP34.21■■■■□ 3.07
SSBP3-204ENST00000371320 EXOSC10Q01780 885 aaKnown RBP34.21■■■■□ 3.07
SSBP3-204ENST00000371320 UVSSAQ2YD98 709 aa34.21■■■■□ 3.07
SSBP3-204ENST00000371320 SYTL4Q96C24 671 aaPredicted RBP34.21■■■■□ 3.07
SSBP3-204ENST00000371320 SCAND2PQ9GZW5 306 aaPredicted RBP34.21■■■■□ 3.07
SSBP3-204ENST00000371320 TTLL11Q8NHH1 800 aa34.21■■■■□ 3.07
SSBP3-204ENST00000371320 LLPHQ9BRT6 129 aaKnown RBP34.21■■■■□ 3.07
SSBP3-204ENST00000371320 ITGA6P23229 1130 aa34.2■■■■□ 3.07
SSBP3-204ENST00000371320 METTL24Q5JXM2 366 aa34.2■■■■□ 3.07
SSBP3-204ENST00000371320 COL14A1Q05707 1796 aaKnown RBP34.2■■■■□ 3.06
SSBP3-204ENST00000371320 A0A0G2JLW4 131 aa34.19■■■■□ 3.06
SSBP3-204ENST00000371320 WASHC4Q2M389 1173 aa34.19■■■■□ 3.06
SSBP3-204ENST00000371320 LDHAL6AQ6ZMR3 332 aa34.19■■■■□ 3.06
SSBP3-204ENST00000371320 GREM2Q9H772 168 aa34.19■■■■□ 3.06
SSBP3-204ENST00000371320 NOL7Q9UMY1 257 aaKnown RBP34.19■■■■□ 3.06
SSBP3-204ENST00000371320 ZBTB1Q9Y2K1 713 aa34.19■■■■□ 3.06
SSBP3-204ENST00000371320 RIPOR2Q9Y4F9 1068 aa34.19■■■■□ 3.06
SSBP3-204ENST00000371320 SCARF1Q14162 830 aa34.19■■■■□ 3.06
SSBP3-204ENST00000371320 ATP2B3Q16720 1220 aa34.19■■■■□ 3.06
SSBP3-204ENST00000371320 DDX11Q96FC9 970 aa34.19■■■■□ 3.06
SSBP3-204ENST00000371320 CTSWP56202 376 aa34.18■■■■□ 3.06
SSBP3-204ENST00000371320 GIMAP6Q6P9H5 292 aa34.18■■■■□ 3.06
SSBP3-204ENST00000371320 AGXT2Q9BYV1 514 aa34.18■■■■□ 3.06
SSBP3-204ENST00000371320 H3BQV1 296 aa34.18■■■■□ 3.06
SSBP3-204ENST00000371320 ZAP70P43403 619 aa34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms