RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 CENPBP07199 599 aaPredicted RBP14.07□□□□□ -0.16
EXOSC1-202ENST00000370885 CCDC152Q4G0S7 254 aa14.07□□□□□ -0.16
EXOSC1-202ENST00000370885 PNMA8AQ86V59 439 aaPredicted RBP14.07□□□□□ -0.16
EXOSC1-202ENST00000370885 CREBZFQ9NS37 354 aa14.07□□□□□ -0.16
EXOSC1-202ENST00000370885 MKRN1Q9UHC7 482 aaKnown RBP14.07□□□□□ -0.16
EXOSC1-202ENST00000370885 TRAF5O00463 557 aa14.06□□□□□ -0.16
EXOSC1-202ENST00000370885 PSMD14O00487 310 aa14.06□□□□□ -0.16
EXOSC1-202ENST00000370885 NEXNQ0ZGT2 675 aa14.06□□□□□ -0.16
EXOSC1-202ENST00000370885 BEND3Q5T5X7 828 aa14.06□□□□□ -0.16
EXOSC1-202ENST00000370885 TRPM4Q8TD43 1214 aa14.06□□□□□ -0.16
EXOSC1-202ENST00000370885 ECE2O60344 883 aa14.05□□□□□ -0.16
EXOSC1-202ENST00000370885 EGFRP00533 1210 aa14.05□□□□□ -0.16
EXOSC1-202ENST00000370885 LMOD1P29536 600 aaPredicted RBP14.05□□□□□ -0.16
EXOSC1-202ENST00000370885 DLK2Q6UY11 383 aa14.05□□□□□ -0.16
EXOSC1-202ENST00000370885 LINS1Q8NG48 757 aa14.05□□□□□ -0.16
EXOSC1-202ENST00000370885 PLA2G12BQ9BX93 195 aa14.05□□□□□ -0.16
EXOSC1-202ENST00000370885 MINPP1Q9UNW1 487 aa14.05□□□□□ -0.16
EXOSC1-202ENST00000370885 UFL1O94874 794 aa14.04□□□□□ -0.16
EXOSC1-202ENST00000370885 CSF1RP07333 972 aa14.04□□□□□ -0.16
EXOSC1-202ENST00000370885 EPHA10Q5JZY3 1008 aa14.04□□□□□ -0.16
EXOSC1-202ENST00000370885 USP50Q70EL3 339 aaPredicted RBP14.04□□□□□ -0.16
EXOSC1-202ENST00000370885 ANKRD18AQ8IVF6 992 aa14.04□□□□□ -0.16
EXOSC1-202ENST00000370885 CDCA7LQ96GN5 454 aa14.04□□□□□ -0.16
EXOSC1-202ENST00000370885 MYH16Q9H6N6 1097 aa14.04□□□□□ -0.16
EXOSC1-202ENST00000370885 ADARB2Q9NS39 739 aaKnown RBP14.04□□□□□ -0.16
EXOSC1-202ENST00000370885 CNOT7Q9UIV1 285 aaKnown RBP14.04□□□□□ -0.16
EXOSC1-202ENST00000370885 TMEM88BA6NKF7 163 aa14.03□□□□□ -0.16
EXOSC1-202ENST00000370885 HSP90B1P14625 803 aaKnown RBP14.03□□□□□ -0.16
EXOSC1-202ENST00000370885 FOXO4P98177 505 aa14.03□□□□□ -0.16
EXOSC1-202ENST00000370885 TNIP1Q15025 636 aa14.03□□□□□ -0.16
EXOSC1-202ENST00000370885 FAM161AQ3B820 660 aa14.03□□□□□ -0.16
EXOSC1-202ENST00000370885 CST9Q5W186 159 aa14.03□□□□□ -0.16
EXOSC1-202ENST00000370885 ANKIB1Q9P2G1 1089 aa14.03□□□□□ -0.16
EXOSC1-202ENST00000370885 PGAP2Q9UHJ9 254 aa14.03□□□□□ -0.16
EXOSC1-202ENST00000370885 GGA1Q9UJY5 639 aa14.03□□□□□ -0.16
EXOSC1-202ENST00000370885 CNTNAP1P78357 1384 aa14.03□□□□□ -0.16
EXOSC1-202ENST00000370885 ZNF646O15015 1829 aaPredicted RBP14.02□□□□□ -0.16
EXOSC1-202ENST00000370885 SAMD7Q7Z3H4 446 aa14.02□□□□□ -0.17
EXOSC1-202ENST00000370885 TXNRD3Q86VQ6 643 aa14.02□□□□□ -0.17
EXOSC1-202ENST00000370885 MICALL2Q8IY33 904 aa14.02□□□□□ -0.17
EXOSC1-202ENST00000370885 BCL2L13Q9BXK5 485 aa14.02□□□□□ -0.17
EXOSC1-202ENST00000370885 ZC3H12CQ9C0D7 883 aaKnown RBP14.02□□□□□ -0.17
EXOSC1-202ENST00000370885 BSDC1Q9NW68 430 aaPredicted RBP14.02□□□□□ -0.17
EXOSC1-202ENST00000370885 XDHP47989 1333 aa14.01□□□□□ -0.17
EXOSC1-202ENST00000370885 SNAP23O00161 211 aa14.01□□□□□ -0.17
EXOSC1-202ENST00000370885 ITGA6P23229 1130 aa14.01□□□□□ -0.17
EXOSC1-202ENST00000370885 KLRK1P26718 216 aa14.01□□□□□ -0.17
EXOSC1-202ENST00000370885 VEGFBP49765 207 aa14.01□□□□□ -0.17
EXOSC1-202ENST00000370885 SLFN5Q08AF3 891 aa14.01□□□□□ -0.17
EXOSC1-202ENST00000370885 MRPL50Q8N5N7 158 aaKnown RBP14.01□□□□□ -0.17
EXOSC1-202ENST00000370885 EYA3Q99504 573 aa14.01□□□□□ -0.17
EXOSC1-202ENST00000370885 GLIS2Q9BZE0 524 aaPredicted RBP14.01□□□□□ -0.17
EXOSC1-202ENST00000370885 POLR2AP24928 1970 aaKnown RBP14.01□□□□□ -0.17
EXOSC1-202ENST00000370885 PSME4Q14997 1843 aa14.01□□□□□ -0.17
EXOSC1-202ENST00000370885 TRPM7Q96QT4 1865 aa14□□□□□ -0.17
EXOSC1-202ENST00000370885 ASTN2O75129 1339 aaPredicted RBP14□□□□□ -0.17
EXOSC1-202ENST00000370885 VIL1P09327 827 aaKnown RBP14□□□□□ -0.17
EXOSC1-202ENST00000370885 HSPA1AP0DMV8 641 aaKnown RBP14□□□□□ -0.17
EXOSC1-202ENST00000370885 HSPA1BP0DMV9 641 aaKnown RBP14□□□□□ -0.17
EXOSC1-202ENST00000370885 TBC1D10BQ4KMP7 808 aaPredicted RBP14□□□□□ -0.17
EXOSC1-202ENST00000370885 COL13A1Q5TAT6 717 aaPredicted RBP14□□□□□ -0.17
EXOSC1-202ENST00000370885 DPF2Q92785 391 aa14□□□□□ -0.17
EXOSC1-202ENST00000370885 KAZALD1Q96I82 304 aa14□□□□□ -0.17
EXOSC1-202ENST00000370885 YTHDC1Q96MU7 727 aaKnown RBP14□□□□□ -0.17
EXOSC1-202ENST00000370885 CDC5LQ99459 802 aaKnown RBP14□□□□□ -0.17
EXOSC1-202ENST00000370885 RASSF10A6NK89 507 aa13.99□□□□□ -0.17
EXOSC1-202ENST00000370885 ATP2B4P23634 1241 aa13.99□□□□□ -0.17
EXOSC1-202ENST00000370885 CCT4P50991 539 aaKnown RBP13.99□□□□□ -0.17
EXOSC1-202ENST00000370885 TRMT2AQ8IZ69 625 aaKnown RBP13.99□□□□□ -0.17
EXOSC1-202ENST00000370885 GMLQ99445 158 aa13.99□□□□□ -0.17
EXOSC1-202ENST00000370885 MXD3Q9BW11 206 aa13.99□□□□□ -0.17
EXOSC1-202ENST00000370885 A0A1B0GUL6 1792 aa13.99□□□□□ -0.17
EXOSC1-202ENST00000370885 IRS2Q9Y4H2 1338 aa13.98□□□□□ -0.17
EXOSC1-202ENST00000370885 RBM26Q5T8P6 1007 aaKnown RBP13.98□□□□□ -0.17
EXOSC1-202ENST00000370885 SSH1Q8WYL5 1049 aa13.98□□□□□ -0.17
EXOSC1-202ENST00000370885 E9PSI1 815 aa13.97□□□□□ -0.17
EXOSC1-202ENST00000370885 H7C1D1 291 aa13.97□□□□□ -0.17
EXOSC1-202ENST00000370885 CCER2I3L3R5 266 aa13.97□□□□□ -0.17
EXOSC1-202ENST00000370885 GRM8O00222 908 aa13.97□□□□□ -0.17
EXOSC1-202ENST00000370885 NBPF7P0C2Y1 421 aaPredicted RBP13.97□□□□□ -0.17
EXOSC1-202ENST00000370885 SLC4A10Q6U841 1118 aa13.97□□□□□ -0.17
EXOSC1-202ENST00000370885 LMBR1LQ6UX01 489 aa13.97□□□□□ -0.17
EXOSC1-202ENST00000370885 HELBQ8NG08 1087 aaPredicted RBP13.97□□□□□ -0.17
EXOSC1-202ENST00000370885 SUCLG2Q96I99 432 aa13.97□□□□□ -0.17
EXOSC1-202ENST00000370885 ZNF594Q96JF6 807 aaPredicted RBP13.97□□□□□ -0.17
EXOSC1-202ENST00000370885 MED23Q9ULK4 1368 aa13.96□□□□□ -0.17
EXOSC1-202ENST00000370885 TAF5LO75529 589 aa13.96□□□□□ -0.17
EXOSC1-202ENST00000370885 RPS12P25398 132 aaKnown RBP13.96□□□□□ -0.17
EXOSC1-202ENST00000370885 IGHMBP2P38935 993 aaKnown RBP13.96□□□□□ -0.17
EXOSC1-202ENST00000370885 CHRNDQ07001 517 aa13.96□□□□□ -0.17
EXOSC1-202ENST00000370885 DEFB115Q30KQ5 88 aa13.96□□□□□ -0.17
EXOSC1-202ENST00000370885 IFFO2Q5TF58 517 aa13.96□□□□□ -0.17
EXOSC1-202ENST00000370885 RSBN1LQ6PCB5 846 aaPredicted RBP13.96□□□□□ -0.17
EXOSC1-202ENST00000370885 USP48Q86UV5 1035 aa13.96□□□□□ -0.17
EXOSC1-202ENST00000370885 ZC3H15Q8WU90 426 aaKnown RBP13.96□□□□□ -0.17
EXOSC1-202ENST00000370885 ZNF609O15014 1411 aa13.96□□□□□ -0.18
EXOSC1-202ENST00000370885 ALDH1L1O75891 902 aa13.95□□□□□ -0.18
EXOSC1-202ENST00000370885 ZNF280AP59817 542 aaPredicted RBP13.95□□□□□ -0.18
EXOSC1-202ENST00000370885 SRCIN1Q9C0H9 1055 aa13.95□□□□□ -0.18
EXOSC1-202ENST00000370885 ABT1Q9ULW3 272 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms